RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 TIMM10P62072 90 aa15.75■□□□□ 0.11
CHRNA3-208ENST00000561128 KIF23Q02241 960 aaPredicted RBP15.75■□□□□ 0.11
CHRNA3-208ENST00000561128 POLA2Q14181 598 aa15.75■□□□□ 0.11
CHRNA3-208ENST00000561128 NBPF12Q5TAG4 269 aaPredicted RBP15.75■□□□□ 0.11
CHRNA3-208ENST00000561128 AIDAQ96BJ3 306 aa15.75■□□□□ 0.11
CHRNA3-208ENST00000561128 SERPINA10Q9UK55 444 aa15.75■□□□□ 0.11
CHRNA3-208ENST00000561128 A0A1B0GUL7 405 aa15.74■□□□□ 0.11
CHRNA3-208ENST00000561128 ZBTB7BO15156 539 aaPredicted RBP15.74■□□□□ 0.11
CHRNA3-208ENST00000561128 FRAT2O75474 233 aaPredicted RBP15.74■□□□□ 0.11
CHRNA3-208ENST00000561128 MAP2K1Q02750 393 aaPredicted RBP15.74■□□□□ 0.11
CHRNA3-208ENST00000561128 NOGQ13253 232 aa15.74■□□□□ 0.11
CHRNA3-208ENST00000561128 RASGRF1Q13972 1273 aa15.74■□□□□ 0.11
CHRNA3-208ENST00000561128 DIXDC1Q155Q3 683 aa15.74■□□□□ 0.11
CHRNA3-208ENST00000561128 CCDC102BQ68D86 513 aa15.74■□□□□ 0.11
CHRNA3-208ENST00000561128 PI16Q6UXB8 463 aa15.74■□□□□ 0.11
CHRNA3-208ENST00000561128 CLMNQ96JQ2 1002 aa15.74■□□□□ 0.11
CHRNA3-208ENST00000561128 TEPSINQ96N21 525 aa15.74■□□□□ 0.11
CHRNA3-208ENST00000561128 LAMB1P07942 1786 aa15.74■□□□□ 0.11
CHRNA3-208ENST00000561128 TCP10L2B9ZVM9 353 aa15.73■□□□□ 0.11
CHRNA3-208ENST00000561128 MMP14P50281 582 aa15.73■□□□□ 0.11
CHRNA3-208ENST00000561128 MKRN3Q13064 507 aaKnown RBP15.73■□□□□ 0.11
CHRNA3-208ENST00000561128 RASA3Q14644 834 aa15.73■□□□□ 0.11
CHRNA3-208ENST00000561128 APOBEC3HQ6NTF7 200 aaKnown RBP15.73■□□□□ 0.11
CHRNA3-208ENST00000561128 FTSJ3Q8IY81 847 aaKnown RBP15.73■□□□□ 0.11
CHRNA3-208ENST00000561128 TNS4Q8IZW8 715 aa15.73■□□□□ 0.11
CHRNA3-208ENST00000561128 FKBP1BP68106 108 aa15.72■□□□□ 0.11
CHRNA3-208ENST00000561128 TTLL12Q14166 644 aaPredicted RBP15.72■□□□□ 0.11
CHRNA3-208ENST00000561128 C20orf194Q5TEA3 1177 aa15.72■□□□□ 0.11
CHRNA3-208ENST00000561128 SSH3Q8TE77 659 aa15.72■□□□□ 0.11
CHRNA3-208ENST00000561128 TBC1D22AQ8WUA7 517 aa15.72■□□□□ 0.11
CHRNA3-208ENST00000561128 XAGE2Q96GT9 111 aa15.72■□□□□ 0.11
CHRNA3-208ENST00000561128 TMEM39BQ9GZU3 492 aa15.72■□□□□ 0.11
CHRNA3-208ENST00000561128 PRDM10Q9NQV6 1147 aa15.72■□□□□ 0.11
CHRNA3-208ENST00000561128 ANGEL1Q9UNK9 670 aaKnown RBP15.72■□□□□ 0.11
CHRNA3-208ENST00000561128 DAGLAQ9Y4D2 1042 aa15.72■□□□□ 0.11
CHRNA3-208ENST00000561128 LDLRAD1Q5T700 205 aa15.71■□□□□ 0.11
CHRNA3-208ENST00000561128 ZNF384Q8TF68 577 aa15.71■□□□□ 0.11
CHRNA3-208ENST00000561128 ZDHHC15Q96MV8 337 aa15.71■□□□□ 0.11
CHRNA3-208ENST00000561128 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.71■□□□□ 0.11
CHRNA3-208ENST00000561128 GJA5P36382 358 aa15.7■□□□□ 0.1
CHRNA3-208ENST00000561128 ATP8B2P98198 1209 aa15.7■□□□□ 0.1
CHRNA3-208ENST00000561128 CEP85Q6P2H3 762 aa15.7■□□□□ 0.1
CHRNA3-208ENST00000561128 TEKT1Q969V4 418 aa15.7■□□□□ 0.1
CHRNA3-208ENST00000561128 CSRNP1Q96S65 589 aa15.7■□□□□ 0.1
CHRNA3-208ENST00000561128 TLR7Q9NYK1 1049 aaKnown RBP15.7■□□□□ 0.1
CHRNA3-208ENST00000561128 HDAC5Q9UQL6 1122 aa15.7■□□□□ 0.1
CHRNA3-208ENST00000561128 SALL1Q9NSC2 1324 aa15.69■□□□□ 0.1
CHRNA3-208ENST00000561128 MYH2Q9UKX2 1941 aa15.69■□□□□ 0.1
CHRNA3-208ENST00000561128 MYO1BO43795 1136 aa15.69■□□□□ 0.1
CHRNA3-208ENST00000561128 HDLBPQ00341 1268 aaKnown RBP15.69■□□□□ 0.1
CHRNA3-208ENST00000561128 WDR66Q8TBY9 1149 aa15.69■□□□□ 0.1
CHRNA3-208ENST00000561128 CCDC102AQ96A19 550 aa15.69■□□□□ 0.1
CHRNA3-208ENST00000561128 RCAN3Q9UKA8 241 aa15.69■□□□□ 0.1
CHRNA3-208ENST00000561128 COG6Q9Y2V7 657 aa15.69■□□□□ 0.1
CHRNA3-208ENST00000561128 PPP2R3BQ9Y5P8 575 aa15.69■□□□□ 0.1
CHRNA3-208ENST00000561128 RFX7Q2KHR2 1363 aa15.69■□□□□ 0.1
CHRNA3-208ENST00000561128 MAST2Q6P0Q8 1798 aa15.69■□□□□ 0.1
CHRNA3-208ENST00000561128 AKAP11Q9UKA4 1901 aa15.68■□□□□ 0.1
CHRNA3-208ENST00000561128 MYO5AQ9Y4I1 1855 aaKnown RBP15.68■□□□□ 0.1
CHRNA3-208ENST00000561128 USP2O75604 605 aaPredicted RBP15.68■□□□□ 0.1
CHRNA3-208ENST00000561128 CAPN15O75808 1086 aa15.68■□□□□ 0.1
CHRNA3-208ENST00000561128 NF2P35240 595 aa15.68■□□□□ 0.1
CHRNA3-208ENST00000561128 NFIAQ12857 509 aa15.68■□□□□ 0.1
CHRNA3-208ENST00000561128 MAP3K11Q16584 847 aa15.68■□□□□ 0.1
CHRNA3-208ENST00000561128 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
CHRNA3-208ENST00000561128 DBNDD2Q9BQY9 259 aa15.68■□□□□ 0.1
CHRNA3-208ENST00000561128 RNF186Q9NXI6 227 aa15.68■□□□□ 0.1
CHRNA3-208ENST00000561128 HMG20BQ9P0W2 317 aa15.68■□□□□ 0.1
CHRNA3-208ENST00000561128 CASP8AP2Q9UKL3 1982 aa15.67■□□□□ 0.1
CHRNA3-208ENST00000561128 MCAMP43121 646 aa15.67■□□□□ 0.1
CHRNA3-208ENST00000561128 ARMC9Q7Z3E5 817 aa15.67■□□□□ 0.1
CHRNA3-208ENST00000561128 SIRT2Q8IXJ6 389 aa15.67■□□□□ 0.1
CHRNA3-208ENST00000561128 NEUROD6Q96NK8 337 aa15.67■□□□□ 0.1
CHRNA3-208ENST00000561128 DENND2AQ9ULE3 1009 aa15.67■□□□□ 0.1
CHRNA3-208ENST00000561128 SUGT1Q9Y2Z0 365 aa15.67■□□□□ 0.1
CHRNA3-208ENST00000561128 SEMA3EO15041 775 aa15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 LDHBP07195 334 aaKnown RBP15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 SLURP2P0DP57 97 aa15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 ARID4AP29374 1257 aaPredicted RBP15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 MVPQ14764 893 aaKnown RBP15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 TNNI3KQ59H18 835 aa15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 SPRYD7Q5W111 196 aa15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 CDC42EP5Q6NZY7 148 aa15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 HHIPL2Q6UWX4 724 aa15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 TBC1D9Q6ZT07 1266 aa15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 ZFPM1Q8IX07 1006 aa15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 NOP58Q9Y2X3 529 aaKnown RBP15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 FPGT-TNNI3KV9GXZ4 949 aa15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 DOCK2Q92608 1830 aa15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 GAKO14976 1311 aa15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 MAST3O60307 1309 aa15.66■□□□□ 0.1
CHRNA3-208ENST00000561128 ZBTB22O15209 634 aa15.65■□□□□ 0.1
CHRNA3-208ENST00000561128 SURF6O75683 361 aaKnown RBP15.65■□□□□ 0.1
CHRNA3-208ENST00000561128 TRPA1O75762 1119 aa15.65■□□□□ 0.1
CHRNA3-208ENST00000561128 G3BP1Q13283 466 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHRNA3-208ENST00000561128 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.65■□□□□ 0.1
CHRNA3-208ENST00000561128 WNK4Q96J92 1243 aa15.65■□□□□ 0.1
CHRNA3-208ENST00000561128 BEGAINQ9BUH8 593 aa15.65■□□□□ 0.1
CHRNA3-208ENST00000561128 R3HDMLQ9H3Y0 253 aa15.65■□□□□ 0.1
CHRNA3-208ENST00000561128 FAM198AQ9UFP1 575 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms