RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 COPRSQ9NQ92 184 aa19.91■□□□□ 0.78
LMX1B-204ENST00000561065 ZNF70Q9UC06 446 aaPredicted RBP19.91■□□□□ 0.78
LMX1B-204ENST00000561065 FBXO3Q9UK99 471 aa19.91■□□□□ 0.78
LMX1B-204ENST00000561065 ANGEL1Q9UNK9 670 aaKnown RBP19.91■□□□□ 0.78
LMX1B-204ENST00000561065 MKRN3Q13064 507 aaKnown RBP19.9■□□□□ 0.78
LMX1B-204ENST00000561065 RASA3Q14644 834 aa19.9■□□□□ 0.78
LMX1B-204ENST00000561065 ATP2B3Q16720 1220 aa19.9■□□□□ 0.78
LMX1B-204ENST00000561065 ARMC9Q7Z3E5 817 aa19.9■□□□□ 0.78
LMX1B-204ENST00000561065 TBC1D22AQ8WUA7 517 aa19.9■□□□□ 0.78
LMX1B-204ENST00000561065 FRAT1Q92837 279 aaPredicted RBP19.9■□□□□ 0.78
LMX1B-204ENST00000561065 CLUAP1Q96AJ1 413 aa19.9■□□□□ 0.78
LMX1B-204ENST00000561065 FRAT2O75474 233 aaPredicted RBP19.89■□□□□ 0.77
LMX1B-204ENST00000561065 TRPA1O75762 1119 aa19.89■□□□□ 0.77
LMX1B-204ENST00000561065 MTX1Q13505 466 aa19.89■□□□□ 0.77
LMX1B-204ENST00000561065 MAP3K11Q16584 847 aa19.89■□□□□ 0.77
LMX1B-204ENST00000561065 ABHD8Q96I13 439 aa19.89■□□□□ 0.77
LMX1B-204ENST00000561065 ADORA1P30542 326 aa19.88■□□□□ 0.77
LMX1B-204ENST00000561065 CLMNQ96JQ2 1002 aa19.88■□□□□ 0.77
LMX1B-204ENST00000561065 TEPSINQ96N21 525 aa19.88■□□□□ 0.77
LMX1B-204ENST00000561065 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.88■□□□□ 0.77
LMX1B-204ENST00000561065 GNAI3P08754 354 aa19.87■□□□□ 0.77
LMX1B-204ENST00000561065 IL15P40933 162 aaPredicted RBP19.87■□□□□ 0.77
LMX1B-204ENST00000561065 CEP126Q9P2H0 1117 aa19.87■□□□□ 0.77
LMX1B-204ENST00000561065 ZBED9Q6R2W3 1325 aa19.86■□□□□ 0.77
LMX1B-204ENST00000561065 TCP10L2B9ZVM9 353 aa19.86■□□□□ 0.77
LMX1B-204ENST00000561065 SRGAP3O43295 1099 aa19.86■□□□□ 0.77
LMX1B-204ENST00000561065 PHKA1P46020 1223 aa19.86■□□□□ 0.77
LMX1B-204ENST00000561065 CACNB3P54284 484 aa19.86■□□□□ 0.77
LMX1B-204ENST00000561065 HDLBPQ00341 1268 aaKnown RBP19.86■□□□□ 0.77
LMX1B-204ENST00000561065 TMEM57Q8N5G2 664 aa19.86■□□□□ 0.77
LMX1B-204ENST00000561065 TMEM39BQ9GZU3 492 aa19.86■□□□□ 0.77
LMX1B-204ENST00000561065 SPRYD7Q5W111 196 aa19.85■□□□□ 0.77
LMX1B-204ENST00000561065 APOBEC3HQ6NTF7 200 aaKnown RBP19.85■□□□□ 0.77
LMX1B-204ENST00000561065 TEKT1Q969V4 418 aa19.85■□□□□ 0.77
LMX1B-204ENST00000561065 ZDHHC15Q96MV8 337 aa19.85■□□□□ 0.77
LMX1B-204ENST00000561065 MCOLN1Q9GZU1 580 aa19.85■□□□□ 0.77
LMX1B-204ENST00000561065 MYH2Q9UKX2 1941 aa19.85■□□□□ 0.77
LMX1B-204ENST00000561065 PNMA6EA0A0J9YXQ4 647 aa19.84■□□□□ 0.77
LMX1B-204ENST00000561065 USP2O75604 605 aaPredicted RBP19.84■□□□□ 0.77
LMX1B-204ENST00000561065 PRDX5P30044 214 aa19.84■□□□□ 0.77
LMX1B-204ENST00000561065 TNFAIP1Q13829 316 aa19.84■□□□□ 0.77
LMX1B-204ENST00000561065 ZKSCAN2Q63HK3 967 aa19.84■□□□□ 0.77
LMX1B-204ENST00000561065 REM2Q8IYK8 340 aaPredicted RBP19.84■□□□□ 0.77
LMX1B-204ENST00000561065 SUGT1Q9Y2Z0 365 aa19.84■□□□□ 0.77
LMX1B-204ENST00000561065 GJA5P36382 358 aa19.83■□□□□ 0.77
LMX1B-204ENST00000561065 SUPT20HL1Q3ZLR7 823 aa19.83■□□□□ 0.77
LMX1B-204ENST00000561065 WDR66Q8TBY9 1149 aa19.83■□□□□ 0.77
LMX1B-204ENST00000561065 MAST3O60307 1309 aa19.82■□□□□ 0.76
LMX1B-204ENST00000561065 PPP1R12BO60237 982 aaPredicted RBP19.82■□□□□ 0.76
LMX1B-204ENST00000561065 GNAI2P04899 355 aa19.82■□□□□ 0.76
LMX1B-204ENST00000561065 RLBP1P12271 317 aa19.82■□□□□ 0.76
LMX1B-204ENST00000561065 TM4SF4P48230 202 aa19.82■□□□□ 0.76
LMX1B-204ENST00000561065 TFCP2Q12800 502 aa19.82■□□□□ 0.76
LMX1B-204ENST00000561065 DIXDC1Q155Q3 683 aa19.82■□□□□ 0.76
LMX1B-204ENST00000561065 WNK4Q96J92 1243 aa19.82■□□□□ 0.76
LMX1B-204ENST00000561065 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.82■□□□□ 0.76
LMX1B-204ENST00000561065 DGKZQ13574 1117 aa19.81■□□□□ 0.76
LMX1B-204ENST00000561065 CCDC102BQ68D86 513 aa19.81■□□□□ 0.76
LMX1B-204ENST00000561065 MRIQ9BWK5 157 aa19.81■□□□□ 0.76
LMX1B-204ENST00000561065 DAGLAQ9Y4D2 1042 aa19.81■□□□□ 0.76
LMX1B-204ENST00000561065 SALL1Q9NSC2 1324 aa19.81■□□□□ 0.76
LMX1B-204ENST00000561065 DOCK2Q92608 1830 aa19.81■□□□□ 0.76
LMX1B-204ENST00000561065 A0A1B0GUL7 405 aa19.8■□□□□ 0.76
LMX1B-204ENST00000561065 TBC1D8O95759 1140 aa19.8■□□□□ 0.76
LMX1B-204ENST00000561065 TIMM10P62072 90 aa19.8■□□□□ 0.76
LMX1B-204ENST00000561065 RASGRF1Q13972 1273 aa19.8■□□□□ 0.76
LMX1B-204ENST00000561065 HHIPL2Q6UWX4 724 aa19.8■□□□□ 0.76
LMX1B-204ENST00000561065 RPAP1Q9BWH6 1393 aaPredicted RBP19.8■□□□□ 0.76
LMX1B-204ENST00000561065 ZBTB22O15209 634 aa19.79■□□□□ 0.76
LMX1B-204ENST00000561065 IREB2P48200 963 aaKnown RBP19.79■□□□□ 0.76
LMX1B-204ENST00000561065 SREBF2Q12772 1141 aa19.79■□□□□ 0.76
LMX1B-204ENST00000561065 SLC10A4Q96EP9 437 aa19.79■□□□□ 0.76
LMX1B-204ENST00000561065 R3HDMLQ9H3Y0 253 aa19.79■□□□□ 0.76
LMX1B-204ENST00000561065 C1orf115Q9H7X2 142 aa19.79■□□□□ 0.76
LMX1B-204ENST00000561065 SEMA3EO15041 775 aa19.78■□□□□ 0.76
LMX1B-204ENST00000561065 ZBTB48P10074 688 aaPredicted RBP19.78■□□□□ 0.76
LMX1B-204ENST00000561065 TNNI2P48788 182 aa19.78■□□□□ 0.76
LMX1B-204ENST00000561065 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.78■□□□□ 0.76
LMX1B-204ENST00000561065 ANKRD13AQ8IZ07 590 aa19.78■□□□□ 0.76
LMX1B-204ENST00000561065 CNKSR2Q8WXI2 1034 aa19.78■□□□□ 0.76
LMX1B-204ENST00000561065 XAGE2Q96GT9 111 aa19.78■□□□□ 0.76
LMX1B-204ENST00000561065 GNL3LQ9NVN8 582 aaKnown RBP19.78■□□□□ 0.76
LMX1B-204ENST00000561065 DENND2AQ9ULE3 1009 aa19.78■□□□□ 0.76
LMX1B-204ENST00000561065 HTTP42858 3142 aa19.78■□□□□ 0.76
LMX1B-204ENST00000561065 UNCXA6NJT0 531 aa19.77■□□□□ 0.76
LMX1B-204ENST00000561065 IGF2BP3O00425 579 aaKnown RBP eCLIP19.77■□□□□ 0.76
LMX1B-204ENST00000561065 FKBP1CQ5VVH2 108 aa19.77■□□□□ 0.76
LMX1B-204ENST00000561065 FAM83AQ86UY5 434 aa19.77■□□□□ 0.76
LMX1B-204ENST00000561065 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.77■□□□□ 0.76
LMX1B-204ENST00000561065 ELP3Q9H9T3 547 aa19.77■□□□□ 0.76
LMX1B-204ENST00000561065 RFX7Q2KHR2 1363 aa19.77■□□□□ 0.76
LMX1B-204ENST00000561065 PDS5AQ29RF7 1337 aaKnown RBP19.77■□□□□ 0.76
LMX1B-204ENST00000561065 MAST2Q6P0Q8 1798 aa19.77■□□□□ 0.76
LMX1B-204ENST00000561065 MANSC4A6NHS7 340 aaPredicted RBP19.76■□□□□ 0.75
LMX1B-204ENST00000561065 LDHBP07195 334 aaKnown RBP19.76■□□□□ 0.75
LMX1B-204ENST00000561065 NFIAQ12857 509 aa19.76■□□□□ 0.75
LMX1B-204ENST00000561065 VGLL4Q14135 290 aa19.76■□□□□ 0.75
LMX1B-204ENST00000561065 POLA2Q14181 598 aa19.76■□□□□ 0.75
LMX1B-204ENST00000561065 CDC42EP5Q6NZY7 148 aa19.76■□□□□ 0.75
LMX1B-204ENST00000561065 ZNF296Q8WUU4 475 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms