RNA–Protein interactions for RNA: ENST00000561003.5

CSHL1-210, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2 BASIC

Gene CSHL1, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-210ENST00000561003 TAF1CQ15572 869 aaPredicted RBP13□□□□□ -0.33
CSHL1-210ENST00000561003 CCL15Q16663 113 aa13□□□□□ -0.33
CSHL1-210ENST00000561003 SLC9C1Q4G0N8 1177 aa13□□□□□ -0.33
CSHL1-210ENST00000561003 HABP4Q5JVS0 413 aaKnown RBP13□□□□□ -0.33
CSHL1-210ENST00000561003 FKBP1CQ5VVH2 108 aa13□□□□□ -0.33
CSHL1-210ENST00000561003 FANCIQ9NVI1 1328 aa12.99□□□□□ -0.33
CSHL1-210ENST00000561003 POTEFA5A3E0 1075 aa12.99□□□□□ -0.33
CSHL1-210ENST00000561003 TCP10L2B9ZVM9 353 aa12.99□□□□□ -0.33
CSHL1-210ENST00000561003 F6X3S4 739 aa12.99□□□□□ -0.33
CSHL1-210ENST00000561003 HOXD10P28358 340 aa12.99□□□□□ -0.33
CSHL1-210ENST00000561003 SLC4A8Q2Y0W8 1093 aa12.99□□□□□ -0.33
CSHL1-210ENST00000561003 DCAF15Q66K64 600 aa12.99□□□□□ -0.33
CSHL1-210ENST00000561003 SLC4A10Q6U841 1118 aa12.99□□□□□ -0.33
CSHL1-210ENST00000561003 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.99□□□□□ -0.33
CSHL1-210ENST00000561003 FBXO33Q7Z6M2 555 aa12.99□□□□□ -0.33
CSHL1-210ENST00000561003 FAM83AQ86UY5 434 aa12.99□□□□□ -0.33
CSHL1-210ENST00000561003 ERO1BQ86YB8 467 aa12.99□□□□□ -0.33
CSHL1-210ENST00000561003 TEKT1Q969V4 418 aa12.99□□□□□ -0.33
CSHL1-210ENST00000561003 ZNF594Q96JF6 807 aaPredicted RBP12.99□□□□□ -0.33
CSHL1-210ENST00000561003 PCDHAC2Q9Y5I4 1007 aa12.99□□□□□ -0.33
CSHL1-210ENST00000561003 EN2P19622 333 aaPredicted RBP12.98□□□□□ -0.33
CSHL1-210ENST00000561003 GJA5P36382 358 aa12.98□□□□□ -0.33
CSHL1-210ENST00000561003 GYG1P46976 350 aa12.98□□□□□ -0.33
CSHL1-210ENST00000561003 SNAPC2Q13487 334 aa12.98□□□□□ -0.33
CSHL1-210ENST00000561003 MRS2Q9HD23 443 aa12.98□□□□□ -0.33
CSHL1-210ENST00000561003 JAG2Q9Y219 1238 aa12.98□□□□□ -0.33
CSHL1-210ENST00000561003 RIPOR2Q9Y4F9 1068 aa12.98□□□□□ -0.33
CSHL1-210ENST00000561003 MAST3O60307 1309 aa12.97□□□□□ -0.33
CSHL1-210ENST00000561003 TLR2O60603 784 aa12.97□□□□□ -0.33
CSHL1-210ENST00000561003 VGLL4Q14135 290 aa12.97□□□□□ -0.33
CSHL1-210ENST00000561003 EPHA10Q5JZY3 1008 aa12.97□□□□□ -0.33
CSHL1-210ENST00000561003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.97□□□□□ -0.33
CSHL1-210ENST00000561003 BRI3BPQ8WY22 251 aa12.97□□□□□ -0.33
CSHL1-210ENST00000561003 ZNF333Q96JL9 665 aa12.97□□□□□ -0.33
CSHL1-210ENST00000561003 TEPSINQ96N21 525 aa12.97□□□□□ -0.33
CSHL1-210ENST00000561003 TMEM39BQ9GZU3 492 aa12.97□□□□□ -0.33
CSHL1-210ENST00000561003 SALL2Q9Y467 1007 aaPredicted RBP12.97□□□□□ -0.33
CSHL1-210ENST00000561003 SPDYE5A6NIY4 337 aa12.96□□□□□ -0.33
CSHL1-210ENST00000561003 PDE8BO95263 885 aa12.96□□□□□ -0.33
CSHL1-210ENST00000561003 IFIT1P09914 478 aaKnown RBP12.96□□□□□ -0.33
CSHL1-210ENST00000561003 CAPN2P17655 700 aa12.96□□□□□ -0.33
CSHL1-210ENST00000561003 METTL24Q5JXM2 366 aa12.96□□□□□ -0.33
CSHL1-210ENST00000561003 HHIPL2Q6UWX4 724 aa12.96□□□□□ -0.33
CSHL1-210ENST00000561003 OTUD5Q96G74 571 aa12.96□□□□□ -0.33
CSHL1-210ENST00000561003 ZDHHC15Q96MV8 337 aa12.96□□□□□ -0.33
CSHL1-210ENST00000561003 ANP32CO43423 234 aa12.95□□□□□ -0.34
CSHL1-210ENST00000561003 PPATQ06203 517 aa12.95□□□□□ -0.34
CSHL1-210ENST00000561003 NKX2-3Q8TAU0 364 aa12.95□□□□□ -0.34
CSHL1-210ENST00000561003 WDR66Q8TBY9 1149 aa12.95□□□□□ -0.34
CSHL1-210ENST00000561003 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
CSHL1-210ENST00000561003 CHAF1AQ13111 956 aaPredicted RBP12.94□□□□□ -0.34
CSHL1-210ENST00000561003 PPIL2Q13356 520 aa12.94□□□□□ -0.34
CSHL1-210ENST00000561003 FAM43AQ8N2R8 423 aa12.94□□□□□ -0.34
CSHL1-210ENST00000561003 WRNIP1Q96S55 665 aa12.94□□□□□ -0.34
CSHL1-210ENST00000561003 ZNF341Q9BYN7 854 aa12.94□□□□□ -0.34
CSHL1-210ENST00000561003 PUS3Q9BZE2 481 aaKnown RBP12.94□□□□□ -0.34
CSHL1-210ENST00000561003 HDAC5Q9UQL6 1122 aa12.94□□□□□ -0.34
CSHL1-210ENST00000561003 UTYO14607 1347 aa12.93□□□□□ -0.34
CSHL1-210ENST00000561003 KIF16BQ96L93 1317 aa12.93□□□□□ -0.34
CSHL1-210ENST00000561003 LACTBP83111 547 aaPredicted RBP12.93□□□□□ -0.34
CSHL1-210ENST00000561003 RABL6Q3YEC7 729 aaPredicted RBP12.93□□□□□ -0.34
CSHL1-210ENST00000561003 CCDC184Q52MB2 194 aa12.93□□□□□ -0.34
CSHL1-210ENST00000561003 GNL3LQ9NVN8 582 aaKnown RBP12.93□□□□□ -0.34
CSHL1-210ENST00000561003 PTCH2Q9Y6C5 1203 aa12.93□□□□□ -0.34
CSHL1-210ENST00000561003 PSME4Q14997 1843 aa12.92□□□□□ -0.34
CSHL1-210ENST00000561003 AOX1Q06278 1338 aa12.92□□□□□ -0.34
CSHL1-210ENST00000561003 BTBD19C9JJ37 291 aa12.92□□□□□ -0.34
CSHL1-210ENST00000561003 IRF6O14896 467 aa12.92□□□□□ -0.34
CSHL1-210ENST00000561003 NBPF7P0C2Y1 421 aaPredicted RBP12.92□□□□□ -0.34
CSHL1-210ENST00000561003 BCAMP50895 628 aa12.92□□□□□ -0.34
CSHL1-210ENST00000561003 PUM3Q15397 648 aaKnown RBP12.92□□□□□ -0.34
CSHL1-210ENST00000561003 APOBEC3HQ6NTF7 200 aaKnown RBP12.92□□□□□ -0.34
CSHL1-210ENST00000561003 ANKRD23Q86SG2 305 aa12.92□□□□□ -0.34
CSHL1-210ENST00000561003 FAM151AQ8WW52 585 aa12.92□□□□□ -0.34
CSHL1-210ENST00000561003 ZKSCAN4Q969J2 545 aaPredicted RBP12.92□□□□□ -0.34
CSHL1-210ENST00000561003 SUCLG2Q96I99 432 aa12.92□□□□□ -0.34
CSHL1-210ENST00000561003 SSC5DA1L4H1 1573 aa12.91□□□□□ -0.34
CSHL1-210ENST00000561003 C17orf99Q6UX52 265 aa12.91□□□□□ -0.34
CSHL1-210ENST00000561003 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
CSHL1-210ENST00000561003 KAZALD1Q96I82 304 aa12.91□□□□□ -0.34
CSHL1-210ENST00000561003 TRIM47Q96LD4 638 aa12.91□□□□□ -0.34
CSHL1-210ENST00000561003 BICC1Q9H694 974 aaKnown RBP12.91□□□□□ -0.34
CSHL1-210ENST00000561003 IQSEC3Q9UPP2 1182 aaPredicted RBP12.91□□□□□ -0.34
CSHL1-210ENST00000561003 SNCAIPQ9Y6H5 919 aa12.91□□□□□ -0.34
CSHL1-210ENST00000561003 PTPRCP08575 1304 aa12.9□□□□□ -0.34
CSHL1-210ENST00000561003 MKI67P46013 3256 aaKnown RBP12.9□□□□□ -0.34
CSHL1-210ENST00000561003 CXCL11O14625 94 aa12.9□□□□□ -0.34
CSHL1-210ENST00000561003 FMNL1O95466 1100 aaPredicted RBP12.9□□□□□ -0.34
CSHL1-210ENST00000561003 SLC5A1P13866 664 aa12.9□□□□□ -0.34
CSHL1-210ENST00000561003 PSMC4P43686 418 aa12.9□□□□□ -0.34
CSHL1-210ENST00000561003 RAET1EQ8TD07 263 aa12.9□□□□□ -0.34
CSHL1-210ENST00000561003 LPIN2Q92539 896 aa12.9□□□□□ -0.34
CSHL1-210ENST00000561003 HTATIP2Q9BUP3 242 aa12.9□□□□□ -0.34
CSHL1-210ENST00000561003 SRRDQ9UH36 339 aa12.9□□□□□ -0.34
CSHL1-210ENST00000561003 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
CSHL1-210ENST00000561003 PDHXO00330 501 aa12.89□□□□□ -0.35
CSHL1-210ENST00000561003 CACNB3P54284 484 aa12.89□□□□□ -0.35
CSHL1-210ENST00000561003 UBXN2AP68543 259 aa12.89□□□□□ -0.35
CSHL1-210ENST00000561003 LRRC24Q50LG9 513 aa12.89□□□□□ -0.35
CSHL1-210ENST00000561003 MIGA2Q7L4E1 593 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms