RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 GNAI1P63096 354 aa11.49□□□□□ -0.57
RABGGTA-217ENST00000560521 NEXNQ0ZGT2 675 aa11.49□□□□□ -0.57
RABGGTA-217ENST00000560521 TNFAIP1Q13829 316 aa11.49□□□□□ -0.57
RABGGTA-217ENST00000560521 CCDC30Q5VVM6 783 aa11.49□□□□□ -0.57
RABGGTA-217ENST00000560521 TSPYL6Q8N831 410 aa11.49□□□□□ -0.57
RABGGTA-217ENST00000560521 TMEM39BQ9GZU3 492 aa11.49□□□□□ -0.57
RABGGTA-217ENST00000560521 IFT57Q9NWB7 429 aa11.49□□□□□ -0.57
RABGGTA-217ENST00000560521 A0A0C4DFX4 3053 aa11.49□□□□□ -0.57
RABGGTA-217ENST00000560521 TCP10L2B9ZVM9 353 aa11.48□□□□□ -0.57
RABGGTA-217ENST00000560521 BTBD19C9JJ37 291 aa11.48□□□□□ -0.57
RABGGTA-217ENST00000560521 ZBTB7BO15156 539 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-217ENST00000560521 GJA8P48165 433 aa11.48□□□□□ -0.57
RABGGTA-217ENST00000560521 C17orf99Q6UX52 265 aa11.48□□□□□ -0.57
RABGGTA-217ENST00000560521 ZNF804AQ7Z570 1209 aa11.48□□□□□ -0.57
RABGGTA-217ENST00000560521 SRRDQ9UH36 339 aa11.48□□□□□ -0.57
RABGGTA-217ENST00000560521 FAM205AQ6ZU69 1335 aa11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 SPDYE5A6NIY4 337 aa11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 GJB1P08034 283 aa11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 CETPP11597 493 aa11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 GCKRQ14397 625 aa11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 G2E3Q7L622 706 aa11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 DZIP1LQ8IYY4 767 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 NKX2-3Q8TAU0 364 aa11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 LRCH3Q96II8 777 aa11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 TRIM47Q96LD4 638 aa11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 HTATIP2Q9BUP3 242 aa11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 ZCCHC17Q9NP64 241 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 SERPINA10Q9UK55 444 aa11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 TTF2Q9UNY4 1162 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 CSADQ9Y600 493 aa11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 SNCAIPQ9Y6H5 919 aa11.47□□□□□ -0.57
RABGGTA-217ENST00000560521 ANKRD18BA2A2Z9 1011 aa11.46□□□□□ -0.57
RABGGTA-217ENST00000560521 IRF6O14896 467 aa11.46□□□□□ -0.57
RABGGTA-217ENST00000560521 WDHD1O75717 1129 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-217ENST00000560521 CCL5P13501 91 aa11.46□□□□□ -0.57
RABGGTA-217ENST00000560521 OSBPP22059 807 aa11.46□□□□□ -0.57
RABGGTA-217ENST00000560521 GRK4P32298 578 aa11.46□□□□□ -0.57
RABGGTA-217ENST00000560521 PSMC4P43686 418 aa11.46□□□□□ -0.57
RABGGTA-217ENST00000560521 ERO1BQ86YB8 467 aa11.46□□□□□ -0.57
RABGGTA-217ENST00000560521 CPA4Q9UI42 421 aa11.46□□□□□ -0.57
RABGGTA-217ENST00000560521 NR2E3Q9Y5X4 410 aa11.46□□□□□ -0.57
RABGGTA-217ENST00000560521 PHIPQ8WWQ0 1821 aa11.45□□□□□ -0.58
RABGGTA-217ENST00000560521 A0A1W2PPC1 479 aa11.45□□□□□ -0.58
RABGGTA-217ENST00000560521 MNX1P50219 401 aaPredicted RBP11.45□□□□□ -0.58
RABGGTA-217ENST00000560521 WDR43Q15061 677 aaKnown RBP eCLIP11.45□□□□□ -0.58
RABGGTA-217ENST00000560521 MFSD14BQ5SR56 506 aa11.45□□□□□ -0.58
RABGGTA-217ENST00000560521 TDRD7Q8NHU6 1098 aaKnown RBP11.45□□□□□ -0.58
RABGGTA-217ENST00000560521 ZKSCAN4Q969J2 545 aaPredicted RBP11.45□□□□□ -0.58
RABGGTA-217ENST00000560521 RNF208Q9H0X6 261 aa11.45□□□□□ -0.58
RABGGTA-217ENST00000560521 RIPOR2Q9Y4F9 1068 aa11.45□□□□□ -0.58
RABGGTA-217ENST00000560521 CUL9Q8IWT3 2517 aa11.45□□□□□ -0.58
RABGGTA-217ENST00000560521 MYPNQ86TC9 1320 aa11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 ADGRA2Q96PE1 1338 aa11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 MYBBP1AQ9BQG0 1328 aaKnown RBP11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 APAF1O14727 1248 aa11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 PLIN1O60240 522 aa11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 HOXD10P28358 340 aa11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 CRKP46108 304 aa11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 TNNI2P48788 182 aa11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 FOXO4P98177 505 aa11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 PPIL2Q13356 520 aa11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 SNAPC2Q13487 334 aa11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 GRIK5Q16478 980 aa11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 RAET1EQ8TD07 263 aa11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 U2AF1L4Q8WU68 220 aaKnown RBP11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 ZNF594Q96JF6 807 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 CHMP4AQ9BY43 222 aa11.44□□□□□ -0.58
RABGGTA-217ENST00000560521 FMNL1O95466 1100 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-217ENST00000560521 SGPL1O95470 568 aa11.43□□□□□ -0.58
RABGGTA-217ENST00000560521 CACNB3P54284 484 aa11.43□□□□□ -0.58
RABGGTA-217ENST00000560521 IFIT5Q13325 482 aaKnown RBP11.43□□□□□ -0.58
RABGGTA-217ENST00000560521 WRNIP1Q96S55 665 aa11.43□□□□□ -0.58
RABGGTA-217ENST00000560521 STAP2Q9UGK3 403 aa11.43□□□□□ -0.58
RABGGTA-217ENST00000560521 UNC80Q8N2C7 3258 aa11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 FARP2O94887 1054 aaPredicted RBP11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 SLC4A2P04920 1241 aa11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 GYG1P46976 350 aa11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 UBXN2AP68543 259 aa11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 CALD1Q05682 793 aaKnown RBP11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 PPATQ06203 517 aa11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 ANKRD23Q86SG2 305 aa11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 FAM84BQ96KN1 310 aaPredicted RBP11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 STK31Q9BXU1 1019 aa11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 UNC93B1Q9H1C4 597 aa11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 BIN2Q9UBW5 565 aaPredicted RBP11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 DOCK2Q92608 1830 aa11.42□□□□□ -0.58
RABGGTA-217ENST00000560521 PDHXO00330 501 aa11.41□□□□□ -0.58
RABGGTA-217ENST00000560521 EVI5O60447 810 aa11.41□□□□□ -0.58
RABGGTA-217ENST00000560521 HIBADHP31937 336 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-217ENST00000560521 PRKCZQ05513 592 aa11.41□□□□□ -0.58
RABGGTA-217ENST00000560521 MOGSQ13724 837 aa11.41□□□□□ -0.58
RABGGTA-217ENST00000560521 LDHAL6AQ6ZMR3 332 aa11.41□□□□□ -0.58
RABGGTA-217ENST00000560521 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
RABGGTA-217ENST00000560521 MYH16Q9H6N6 1097 aa11.41□□□□□ -0.58
RABGGTA-217ENST00000560521 GABRQQ9UN88 632 aa11.41□□□□□ -0.58
RABGGTA-217ENST00000560521 CHMP3Q9Y3E7 222 aa11.41□□□□□ -0.58
RABGGTA-217ENST00000560521 MYH2Q9UKX2 1941 aa11.41□□□□□ -0.58
RABGGTA-217ENST00000560521 DDX60LQ5H9U9 1706 aaKnown RBP11.4□□□□□ -0.58
RABGGTA-217ENST00000560521 BCRP11274 1271 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms