RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ZBTB48P10074 688 aaPredicted RBP17.5■□□□□ 0.39
TPM1-223ENST00000560445 FGFR2P21802 821 aa17.5■□□□□ 0.39
TPM1-223ENST00000560445 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
TPM1-223ENST00000560445 ATP2B3Q16720 1220 aa17.5■□□□□ 0.39
TPM1-223ENST00000560445 LDLRAD1Q5T700 205 aa17.5■□□□□ 0.39
TPM1-223ENST00000560445 DZIP1LQ8IYY4 767 aaKnown RBP17.5■□□□□ 0.39
TPM1-223ENST00000560445 SLC10A4Q96EP9 437 aa17.5■□□□□ 0.39
TPM1-223ENST00000560445 SCAF8Q9UPN6 1271 aaKnown RBP17.5■□□□□ 0.39
TPM1-223ENST00000560445 LRRFIP2Q9Y608 721 aaKnown RBP17.5■□□□□ 0.39
TPM1-223ENST00000560445 MANSC4A6NHS7 340 aaPredicted RBP17.49■□□□□ 0.39
TPM1-223ENST00000560445 RASA3Q14644 834 aa17.49■□□□□ 0.39
TPM1-223ENST00000560445 ATF7IPQ6VMQ6 1270 aa17.49■□□□□ 0.39
TPM1-223ENST00000560445 MOB2Q70IA6 237 aa17.49■□□□□ 0.39
TPM1-223ENST00000560445 ZGPATQ8N5A5 531 aaKnown RBP17.49■□□□□ 0.39
TPM1-223ENST00000560445 KLHDC4Q8TBB5 520 aa17.49■□□□□ 0.39
TPM1-223ENST00000560445 ZIC5Q96T25 663 aa17.49■□□□□ 0.39
TPM1-223ENST00000560445 ZNF70Q9UC06 446 aaPredicted RBP17.49■□□□□ 0.39
TPM1-223ENST00000560445 AKAP2Q9Y2D5 859 aa17.49■□□□□ 0.39
TPM1-223ENST00000560445 CASP8AP2Q9UKL3 1982 aa17.48■□□□□ 0.39
TPM1-223ENST00000560445 TM4SF4P48230 202 aa17.48■□□□□ 0.39
TPM1-223ENST00000560445 BCAMP50895 628 aa17.48■□□□□ 0.39
TPM1-223ENST00000560445 HNRNPUQ00839 825 aaKnown RBP eCLIP17.48■□□□□ 0.39
TPM1-223ENST00000560445 PRKG1Q13976 671 aa17.48■□□□□ 0.39
TPM1-223ENST00000560445 NOM1Q5C9Z4 860 aaKnown RBP17.48■□□□□ 0.39
TPM1-223ENST00000560445 FKBP1CQ5VVH2 108 aa17.48■□□□□ 0.39
TPM1-223ENST00000560445 ANKRD13AQ8IZ07 590 aa17.48■□□□□ 0.39
TPM1-223ENST00000560445 MIER1Q8N108 512 aa17.48■□□□□ 0.39
TPM1-223ENST00000560445 ZDHHC15Q96MV8 337 aa17.48■□□□□ 0.39
TPM1-223ENST00000560445 SIL1Q9H173 461 aa17.48■□□□□ 0.39
TPM1-223ENST00000560445 COPRSQ9NQ92 184 aa17.48■□□□□ 0.39
TPM1-223ENST00000560445 ZBTB22O15209 634 aa17.47■□□□□ 0.39
TPM1-223ENST00000560445 DGKZQ13574 1117 aa17.47■□□□□ 0.39
TPM1-223ENST00000560445 SPRYD7Q5W111 196 aa17.47■□□□□ 0.39
TPM1-223ENST00000560445 OTUD7BQ6GQQ9 843 aa17.47■□□□□ 0.39
TPM1-223ENST00000560445 HHIPL2Q6UWX4 724 aa17.47■□□□□ 0.39
TPM1-223ENST00000560445 FRAT1Q92837 279 aaPredicted RBP17.47■□□□□ 0.39
TPM1-223ENST00000560445 MEIS3Q99687 375 aa17.47■□□□□ 0.39
TPM1-223ENST00000560445 TDRD3Q9H7E2 651 aaKnown RBP17.47■□□□□ 0.39
TPM1-223ENST00000560445 DENND2AQ9ULE3 1009 aa17.47■□□□□ 0.39
TPM1-223ENST00000560445 IQSEC3Q9UPP2 1182 aaPredicted RBP17.47■□□□□ 0.39
TPM1-223ENST00000560445 SRGAP3O43295 1099 aa17.46■□□□□ 0.39
TPM1-223ENST00000560445 GNAI2P04899 355 aa17.46■□□□□ 0.39
TPM1-223ENST00000560445 MTX1Q13505 466 aa17.46■□□□□ 0.39
TPM1-223ENST00000560445 ZKSCAN2Q63HK3 967 aa17.46■□□□□ 0.39
TPM1-223ENST00000560445 ATG9AQ7Z3C6 839 aa17.46■□□□□ 0.39
TPM1-223ENST00000560445 TRIM27P14373 513 aa17.45■□□□□ 0.38
TPM1-223ENST00000560445 PKN2Q16513 984 aaKnown RBP17.45■□□□□ 0.38
TPM1-223ENST00000560445 FAM83AQ86UY5 434 aa17.45■□□□□ 0.38
TPM1-223ENST00000560445 SLF2Q8IX21 1173 aa17.45■□□□□ 0.38
TPM1-223ENST00000560445 CFHR5Q9BXR6 569 aa17.45■□□□□ 0.38
TPM1-223ENST00000560445 MCOLN1Q9GZU1 580 aa17.45■□□□□ 0.38
TPM1-223ENST00000560445 PDS5AQ29RF7 1337 aaKnown RBP17.45■□□□□ 0.38
TPM1-223ENST00000560445 SALL1Q9NSC2 1324 aa17.45■□□□□ 0.38
TPM1-223ENST00000560445 RPAP1Q9BWH6 1393 aaPredicted RBP17.44■□□□□ 0.38
TPM1-223ENST00000560445 WDHD1O75717 1129 aaPredicted RBP17.44■□□□□ 0.38
TPM1-223ENST00000560445 MVPQ14764 893 aaKnown RBP17.44■□□□□ 0.38
TPM1-223ENST00000560445 NBPF12Q5TAG4 269 aaPredicted RBP17.44■□□□□ 0.38
TPM1-223ENST00000560445 DCAF15Q66K64 600 aa17.44■□□□□ 0.38
TPM1-223ENST00000560445 CTU1Q7Z7A3 348 aaKnown RBP17.44■□□□□ 0.38
TPM1-223ENST00000560445 FTSJ3Q8IY81 847 aaKnown RBP17.44■□□□□ 0.38
TPM1-223ENST00000560445 CSADQ9Y600 493 aa17.44■□□□□ 0.38
TPM1-223ENST00000560445 SSC5DA1L4H1 1573 aa17.44■□□□□ 0.38
TPM1-223ENST00000560445 CCDC85CA6NKD9 419 aa17.43■□□□□ 0.38
TPM1-223ENST00000560445 TCP10L2B9ZVM9 353 aa17.43■□□□□ 0.38
TPM1-223ENST00000560445 LDHBP07195 334 aaKnown RBP17.43■□□□□ 0.38
TPM1-223ENST00000560445 SPTY2D1Q68D10 685 aaPredicted RBP17.43■□□□□ 0.38
TPM1-223ENST00000560445 WNK4Q96J92 1243 aa17.43■□□□□ 0.38
TPM1-223ENST00000560445 PCDHAC2Q9Y5I4 1007 aa17.43■□□□□ 0.38
TPM1-223ENST00000560445 MKRN3Q13064 507 aaKnown RBP17.42■□□□□ 0.38
TPM1-223ENST00000560445 LAMB1P07942 1786 aa17.42■□□□□ 0.38
TPM1-223ENST00000560445 ZBED9Q6R2W3 1325 aa17.42■□□□□ 0.38
TPM1-223ENST00000560445 GORABQ5T7V8 394 aa17.41■□□□□ 0.38
TPM1-223ENST00000560445 USP2O75604 605 aaPredicted RBP17.4■□□□□ 0.38
TPM1-223ENST00000560445 MS4A1P11836 297 aa17.4■□□□□ 0.38
TPM1-223ENST00000560445 MAP3K9P80192 1104 aa17.4■□□□□ 0.38
TPM1-223ENST00000560445 G3BP1Q13283 466 aaKnown RBP eCLIP17.4■□□□□ 0.38
TPM1-223ENST00000560445 DZIP1Q86YF9 867 aaKnown RBP17.4■□□□□ 0.38
TPM1-223ENST00000560445 TMEM39BQ9GZU3 492 aa17.4■□□□□ 0.38
TPM1-223ENST00000560445 PA2G4Q9UQ80 394 aaKnown RBP17.4■□□□□ 0.38
TPM1-223ENST00000560445 BCAR3O75815 825 aa17.39■□□□□ 0.37
TPM1-223ENST00000560445 CCDC102BQ68D86 513 aa17.39■□□□□ 0.37
TPM1-223ENST00000560445 IFNL1Q8IU54 200 aa17.39■□□□□ 0.37
TPM1-223ENST00000560445 CLMNQ96JQ2 1002 aa17.39■□□□□ 0.37
TPM1-223ENST00000560445 TEPSINQ96N21 525 aa17.39■□□□□ 0.37
TPM1-223ENST00000560445 A0A1B0GUL7 405 aa17.38■□□□□ 0.37
TPM1-223ENST00000560445 GPR25O00155 361 aa17.38■□□□□ 0.37
TPM1-223ENST00000560445 FKTNO75072 461 aa17.38■□□□□ 0.37
TPM1-223ENST00000560445 TBC1D8O95759 1140 aa17.38■□□□□ 0.37
TPM1-223ENST00000560445 GTF2A2P52657 109 aa17.38■□□□□ 0.37
TPM1-223ENST00000560445 APOBEC3HQ6NTF7 200 aaKnown RBP17.38■□□□□ 0.37
TPM1-223ENST00000560445 ZNF296Q8WUU4 475 aaPredicted RBP17.38■□□□□ 0.37
TPM1-223ENST00000560445 CLUAP1Q96AJ1 413 aa17.38■□□□□ 0.37
TPM1-223ENST00000560445 AOX1Q06278 1338 aa17.38■□□□□ 0.37
TPM1-223ENST00000560445 OTOFQ9HC10 1997 aa17.37■□□□□ 0.37
TPM1-223ENST00000560445 PHKA1P46020 1223 aa17.37■□□□□ 0.37
TPM1-223ENST00000560445 ARHGEF6Q15052 776 aa17.37■□□□□ 0.37
TPM1-223ENST00000560445 GRIK5Q16478 980 aa17.37■□□□□ 0.37
TPM1-223ENST00000560445 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.37■□□□□ 0.37
TPM1-223ENST00000560445 FAM151AQ8WW52 585 aa17.37■□□□□ 0.37
TPM1-223ENST00000560445 OPTNQ96CV9 577 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms