RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 PAPLNO95428 1278 aa6.48□□□□□ -1.37
SPG11-222ENST00000560435 GSTM4Q03013 218 aa6.48□□□□□ -1.37
SPG11-222ENST00000560435 MAP7Q14244 749 aa6.48□□□□□ -1.37
SPG11-222ENST00000560435 DUSP27Q5VZP5 1158 aa6.48□□□□□ -1.37
SPG11-222ENST00000560435 ASAP3Q8TDY4 903 aa6.48□□□□□ -1.37
SPG11-222ENST00000560435 ZC3H7BQ9UGR2 993 aaKnown RBP6.48□□□□□ -1.37
SPG11-222ENST00000560435 PHACTR2O75167 634 aa6.47□□□□□ -1.37
SPG11-222ENST00000560435 SNX29Q8TEQ0 813 aa6.47□□□□□ -1.37
SPG11-222ENST00000560435 ACTL7BQ9Y614 415 aa6.47□□□□□ -1.37
SPG11-222ENST00000560435 TNFRSF21O75509 655 aa6.46□□□□□ -1.38
SPG11-222ENST00000560435 EIF1AXP47813 144 aaKnown RBP6.46□□□□□ -1.38
SPG11-222ENST00000560435 ZNF765Q7L2R6 523 aa6.46□□□□□ -1.38
SPG11-222ENST00000560435 LRRC4CQ9HCJ2 640 aa6.46□□□□□ -1.38
SPG11-222ENST00000560435 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.45□□□□□ -1.38
SPG11-222ENST00000560435 NFICP08651 508 aa6.45□□□□□ -1.38
SPG11-222ENST00000560435 RAB6AP20340 208 aa6.45□□□□□ -1.38
SPG11-222ENST00000560435 MPSTP25325 297 aa6.45□□□□□ -1.38
SPG11-222ENST00000560435 HP1BP3Q5SSJ5 553 aaPredicted RBP6.45□□□□□ -1.38
SPG11-222ENST00000560435 PEAR1Q5VY43 1037 aaPredicted RBP6.45□□□□□ -1.38
SPG11-222ENST00000560435 SEMA6CQ9H3T2 930 aa6.45□□□□□ -1.38
SPG11-222ENST00000560435 SLC5A6Q9Y289 635 aa6.45□□□□□ -1.38
SPG11-222ENST00000560435 BIN1O00499 593 aa6.44□□□□□ -1.38
SPG11-222ENST00000560435 EHHADHQ08426 723 aa6.44□□□□□ -1.38
SPG11-222ENST00000560435 ALKBH2Q6NS38 261 aa6.44□□□□□ -1.38
SPG11-222ENST00000560435 WFDC3Q8IUB2 231 aa6.44□□□□□ -1.38
SPG11-222ENST00000560435 STK11IPQ8N1F8 1099 aa6.44□□□□□ -1.38
SPG11-222ENST00000560435 BCL7CQ8WUZ0 217 aaPredicted RBP6.44□□□□□ -1.38
SPG11-222ENST00000560435 ACSS3Q9H6R3 686 aa6.44□□□□□ -1.38
SPG11-222ENST00000560435 POLIQ9UNA4 740 aa6.44□□□□□ -1.38
SPG11-222ENST00000560435 PLCL1Q15111 1095 aa6.43□□□□□ -1.38
SPG11-222ENST00000560435 ZNF648Q5T619 568 aaPredicted RBP6.43□□□□□ -1.38
SPG11-222ENST00000560435 SEZ6L2Q6UXD5 910 aa6.43□□□□□ -1.38
SPG11-222ENST00000560435 LATS2Q9NRM7 1088 aa6.43□□□□□ -1.38
SPG11-222ENST00000560435 FOXD3Q9UJU5 478 aaPredicted RBP6.43□□□□□ -1.38
SPG11-222ENST00000560435 AMOTL2Q9Y2J4 779 aa6.43□□□□□ -1.38
SPG11-222ENST00000560435 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.43□□□□□ -1.38
SPG11-222ENST00000560435 METTL12A8MUP2 240 aa6.42□□□□□ -1.38
SPG11-222ENST00000560435 CYP11A1P05108 521 aa6.42□□□□□ -1.38
SPG11-222ENST00000560435 CTSBP07858 339 aa6.42□□□□□ -1.38
SPG11-222ENST00000560435 MAOBP27338 520 aa6.42□□□□□ -1.38
SPG11-222ENST00000560435 PCDH1Q08174 1060 aa6.42□□□□□ -1.38
SPG11-222ENST00000560435 ZNF792Q3KQV3 632 aa6.42□□□□□ -1.38
SPG11-222ENST00000560435 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
SPG11-222ENST00000560435 ZNF574Q6ZN55 896 aaPredicted RBP6.42□□□□□ -1.38
SPG11-222ENST00000560435 DYMQ7RTS9 669 aa6.42□□□□□ -1.38
SPG11-222ENST00000560435 GSX1Q9H4S2 264 aaPredicted RBP6.42□□□□□ -1.38
SPG11-222ENST00000560435 ZFYVE1Q9HBF4 777 aa6.42□□□□□ -1.38
SPG11-222ENST00000560435 FAM105AQ9NUU6 356 aa6.42□□□□□ -1.38
SPG11-222ENST00000560435 CARMIL2Q6F5E8 1435 aa6.42□□□□□ -1.38
SPG11-222ENST00000560435 DBX1A6NMT0 343 aa6.41□□□□□ -1.38
SPG11-222ENST00000560435 USP5P45974 858 aa6.41□□□□□ -1.38
SPG11-222ENST00000560435 POU4F3Q15319 338 aa6.41□□□□□ -1.38
SPG11-222ENST00000560435 AKAP4Q5JQC9 854 aa6.41□□□□□ -1.38
SPG11-222ENST00000560435 OGFOD3Q6PK18 319 aa6.41□□□□□ -1.38
SPG11-222ENST00000560435 PBXIP1Q96AQ6 731 aa6.41□□□□□ -1.38
SPG11-222ENST00000560435 MISP3Q96FF7 219 aa6.41□□□□□ -1.38
SPG11-222ENST00000560435 CLEC4MQ9H2X3 399 aaPredicted RBP6.41□□□□□ -1.38
SPG11-222ENST00000560435 C1GALT1Q9NS00 363 aa6.41□□□□□ -1.38
SPG11-222ENST00000560435 A0A096LPE4 126 aa6.4□□□□□ -1.38
SPG11-222ENST00000560435 A0A1W2PPZ6 126 aa6.4□□□□□ -1.38
SPG11-222ENST00000560435 NPR3P17342 541 aa6.4□□□□□ -1.38
SPG11-222ENST00000560435 ZNF423Q2M1K9 1284 aa6.4□□□□□ -1.38
SPG11-222ENST00000560435 SPRED2Q7Z698 418 aa6.4□□□□□ -1.38
SPG11-222ENST00000560435 ATG4DQ86TL0 474 aaPredicted RBP6.4□□□□□ -1.38
SPG11-222ENST00000560435 GTF3C2Q8WUA4 911 aaPredicted RBP6.4□□□□□ -1.38
SPG11-222ENST00000560435 KRTAP4-2Q9BYR5 136 aa6.4□□□□□ -1.38
SPG11-222ENST00000560435 AP4E1Q9UPM8 1137 aa6.4□□□□□ -1.38
SPG11-222ENST00000560435 FARP2O94887 1054 aaPredicted RBP6.39□□□□□ -1.39
SPG11-222ENST00000560435 ASPAP45381 313 aa6.39□□□□□ -1.39
SPG11-222ENST00000560435 ZNF124Q15973 351 aa6.39□□□□□ -1.39
SPG11-222ENST00000560435 FBLN7Q53RD9 439 aa6.39□□□□□ -1.39
SPG11-222ENST00000560435 CCNJLQ8IV13 435 aa6.39□□□□□ -1.39
SPG11-222ENST00000560435 ZFYVE28Q9HCC9 887 aa6.39□□□□□ -1.39
SPG11-222ENST00000560435 RAD18Q9NS91 495 aa6.39□□□□□ -1.39
SPG11-222ENST00000560435 DYNC1LI2O43237 492 aaPredicted RBP6.38□□□□□ -1.39
SPG11-222ENST00000560435 CYP27C1Q4G0S4 372 aa6.38□□□□□ -1.39
SPG11-222ENST00000560435 SPOCD1Q6ZMY3 1216 aa6.38□□□□□ -1.39
SPG11-222ENST00000560435 CORO1BQ9BR76 489 aa6.38□□□□□ -1.39
SPG11-222ENST00000560435 TRIM56Q9BRZ2 755 aaKnown RBP6.38□□□□□ -1.39
SPG11-222ENST00000560435 DAGLAQ9Y4D2 1042 aa6.38□□□□□ -1.39
SPG11-222ENST00000560435 SYNGAP1Q96PV0 1343 aa6.38□□□□□ -1.39
SPG11-222ENST00000560435 FUT4P22083 530 aa6.37□□□□□ -1.39
SPG11-222ENST00000560435 AAMPQ13685 434 aa6.37□□□□□ -1.39
SPG11-222ENST00000560435 GJD3Q8N144 294 aa6.37□□□□□ -1.39
SPG11-222ENST00000560435 GLIS3Q8NEA6 775 aa6.37□□□□□ -1.39
SPG11-222ENST00000560435 DDX54Q8TDD1 881 aaKnown RBP6.37□□□□□ -1.39
SPG11-222ENST00000560435 TCF12Q99081 682 aa6.37□□□□□ -1.39
SPG11-222ENST00000560435 A0A1W2PP55 124 aa6.36□□□□□ -1.39
SPG11-222ENST00000560435 FZD6O60353 706 aa6.36□□□□□ -1.39
SPG11-222ENST00000560435 FAM13AO94988 1023 aa6.36□□□□□ -1.39
SPG11-222ENST00000560435 ECEL1O95672 775 aa6.36□□□□□ -1.39
SPG11-222ENST00000560435 B3GALT4O96024 378 aa6.36□□□□□ -1.39
SPG11-222ENST00000560435 GRIA4P48058 902 aa6.36□□□□□ -1.39
SPG11-222ENST00000560435 BNIP3Q12983 259 aa6.36□□□□□ -1.39
SPG11-222ENST00000560435 MTMR3Q13615 1198 aa6.36□□□□□ -1.39
SPG11-222ENST00000560435 PKN1Q16512 942 aa6.36□□□□□ -1.39
SPG11-222ENST00000560435 SPRED3Q2MJR0 410 aa6.36□□□□□ -1.39
SPG11-222ENST00000560435 NETO1Q8TDF5 533 aa6.36□□□□□ -1.39
SPG11-222ENST00000560435 FAM168AQ92567 244 aa6.36□□□□□ -1.39
SPG11-222ENST00000560435 LIN7BQ9HAP6 207 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms