RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ANKRD13AQ8IZ07 590 aa16.99■□□□□ 0.31
SMAD3-214ENST00000560402 ZNF70Q9UC06 446 aaPredicted RBP16.99■□□□□ 0.31
SMAD3-214ENST00000560402 HPS5Q9UPZ3 1129 aa16.99■□□□□ 0.31
SMAD3-214ENST00000560402 TNRC18O15417 2968 aaPredicted RBP16.98■□□□□ 0.31
SMAD3-214ENST00000560402 MAST3O60307 1309 aa16.98■□□□□ 0.31
SMAD3-214ENST00000560402 FRAT2O75474 233 aaPredicted RBP16.98■□□□□ 0.31
SMAD3-214ENST00000560402 CT47B1P0C2W7 299 aaPredicted RBP16.98■□□□□ 0.31
SMAD3-214ENST00000560402 CRKP46108 304 aa16.98■□□□□ 0.31
SMAD3-214ENST00000560402 LRRC24Q50LG9 513 aa16.98■□□□□ 0.31
SMAD3-214ENST00000560402 NBPF12Q5TAG4 269 aaPredicted RBP16.98■□□□□ 0.31
SMAD3-214ENST00000560402 IFNL1Q8IU54 200 aa16.98■□□□□ 0.31
SMAD3-214ENST00000560402 DZIP1LQ8IYY4 767 aaKnown RBP16.98■□□□□ 0.31
SMAD3-214ENST00000560402 FZD1Q9UP38 647 aa16.98■□□□□ 0.31
SMAD3-214ENST00000560402 SUGT1Q9Y2Z0 365 aa16.98■□□□□ 0.31
SMAD3-214ENST00000560402 PDE4DIPQ5VU43 2346 aa16.98■□□□□ 0.31
SMAD3-214ENST00000560402 AOX1Q06278 1338 aa16.97■□□□□ 0.31
SMAD3-214ENST00000560402 IFIT1P09914 478 aaKnown RBP16.97■□□□□ 0.31
SMAD3-214ENST00000560402 PUM3Q15397 648 aaKnown RBP16.97■□□□□ 0.31
SMAD3-214ENST00000560402 FBXO46Q6PJ61 603 aaPredicted RBP16.97■□□□□ 0.31
SMAD3-214ENST00000560402 CLMNQ96JQ2 1002 aa16.97■□□□□ 0.31
SMAD3-214ENST00000560402 USP44Q9H0E7 712 aa16.97■□□□□ 0.31
SMAD3-214ENST00000560402 USP2O75604 605 aaPredicted RBP16.96■□□□□ 0.31
SMAD3-214ENST00000560402 SOX10P56693 466 aa16.96■□□□□ 0.31
SMAD3-214ENST00000560402 OTUD7BQ6GQQ9 843 aa16.96■□□□□ 0.31
SMAD3-214ENST00000560402 TDRD3Q9H7E2 651 aaKnown RBP16.96■□□□□ 0.31
SMAD3-214ENST00000560402 SMC4Q9NTJ3 1288 aa16.96■□□□□ 0.31
SMAD3-214ENST00000560402 RPAP1Q9BWH6 1393 aaPredicted RBP16.96■□□□□ 0.31
SMAD3-214ENST00000560402 CHAF1AQ13111 956 aaPredicted RBP16.95■□□□□ 0.3
SMAD3-214ENST00000560402 TEKT1Q969V4 418 aa16.95■□□□□ 0.3
SMAD3-214ENST00000560402 MRIQ9BWK5 157 aa16.95■□□□□ 0.3
SMAD3-214ENST00000560402 FBXO3Q9UK99 471 aa16.95■□□□□ 0.3
SMAD3-214ENST00000560402 RBBP6Q7Z6E9 1792 aaKnown RBP16.94■□□□□ 0.3
SMAD3-214ENST00000560402 IGF2BP3O00425 579 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMAD3-214ENST00000560402 FGFR2P21802 821 aa16.94■□□□□ 0.3
SMAD3-214ENST00000560402 HOOK2Q96ED9 719 aa16.94■□□□□ 0.3
SMAD3-214ENST00000560402 ZDHHC15Q96MV8 337 aa16.94■□□□□ 0.3
SMAD3-214ENST00000560402 TEPSINQ96N21 525 aa16.94■□□□□ 0.3
SMAD3-214ENST00000560402 TMOD2Q9NZR1 351 aa16.94■□□□□ 0.3
SMAD3-214ENST00000560402 HDAC5Q9UQL6 1122 aa16.94■□□□□ 0.3
SMAD3-214ENST00000560402 TESPA1A2RU30 521 aaPredicted RBP16.93■□□□□ 0.3
SMAD3-214ENST00000560402 EYA2O00167 538 aa16.93■□□□□ 0.3
SMAD3-214ENST00000560402 SLC5A1P13866 664 aa16.93■□□□□ 0.3
SMAD3-214ENST00000560402 FKBP1CQ5VVH2 108 aa16.93■□□□□ 0.3
SMAD3-214ENST00000560402 LPIN2Q92539 896 aa16.93■□□□□ 0.3
SMAD3-214ENST00000560402 IQSEC3Q9UPP2 1182 aaPredicted RBP16.93■□□□□ 0.3
SMAD3-214ENST00000560402 TCP10L2B9ZVM9 353 aa16.92■□□□□ 0.3
SMAD3-214ENST00000560402 UBTFL1P0CB47 393 aaPredicted RBP16.92■□□□□ 0.3
SMAD3-214ENST00000560402 GJA5P36382 358 aa16.92■□□□□ 0.3
SMAD3-214ENST00000560402 RFX5P48382 616 aaPredicted RBP16.92■□□□□ 0.3
SMAD3-214ENST00000560402 FAM83AQ86UY5 434 aa16.92■□□□□ 0.3
SMAD3-214ENST00000560402 TRMT2AQ8IZ69 625 aaKnown RBP16.92■□□□□ 0.3
SMAD3-214ENST00000560402 KLHDC4Q8TBB5 520 aa16.92■□□□□ 0.3
SMAD3-214ENST00000560402 OPTNQ96CV9 577 aa16.92■□□□□ 0.3
SMAD3-214ENST00000560402 ERO1AQ96HE7 468 aa16.92■□□□□ 0.3
SMAD3-214ENST00000560402 CIAO1O76071 339 aa16.91■□□□□ 0.3
SMAD3-214ENST00000560402 BCAMP50895 628 aa16.91■□□□□ 0.3
SMAD3-214ENST00000560402 GRIK5Q16478 980 aa16.91■□□□□ 0.3
SMAD3-214ENST00000560402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMAD3-214ENST00000560402 WDR66Q8TBY9 1149 aa16.91■□□□□ 0.3
SMAD3-214ENST00000560402 API5Q9BZZ5 524 aaKnown RBP16.91■□□□□ 0.3
SMAD3-214ENST00000560402 TMEM39BQ9GZU3 492 aa16.91■□□□□ 0.3
SMAD3-214ENST00000560402 R3HDMLQ9H3Y0 253 aa16.91■□□□□ 0.3
SMAD3-214ENST00000560402 ELP3Q9H9T3 547 aa16.91■□□□□ 0.3
SMAD3-214ENST00000560402 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.91■□□□□ 0.3
SMAD3-214ENST00000560402 CSADQ9Y600 493 aa16.91■□□□□ 0.3
SMAD3-214ENST00000560402 MAP3K9P80192 1104 aa16.9■□□□□ 0.3
SMAD3-214ENST00000560402 VGLL4Q14135 290 aa16.9■□□□□ 0.3
SMAD3-214ENST00000560402 HHIPL2Q6UWX4 724 aa16.9■□□□□ 0.3
SMAD3-214ENST00000560402 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.9■□□□□ 0.3
SMAD3-214ENST00000560402 DOCK2Q92608 1830 aa16.89■□□□□ 0.29
SMAD3-214ENST00000560402 HTTP42858 3142 aa16.89■□□□□ 0.29
SMAD3-214ENST00000560402 ZBTB22O15209 634 aa16.89■□□□□ 0.29
SMAD3-214ENST00000560402 SLC34A2O95436 690 aa16.89■□□□□ 0.29
SMAD3-214ENST00000560402 GTF2A2P52657 109 aa16.89■□□□□ 0.29
SMAD3-214ENST00000560402 CRHR2Q13324 411 aa16.89■□□□□ 0.29
SMAD3-214ENST00000560402 OTOP1Q7RTM1 612 aa16.89■□□□□ 0.29
SMAD3-214ENST00000560402 CDAN1Q8IWY9 1227 aa16.89■□□□□ 0.29
SMAD3-214ENST00000560402 CDCA7LQ96GN5 454 aa16.89■□□□□ 0.29
SMAD3-214ENST00000560402 TRIM17Q9Y577 477 aa16.89■□□□□ 0.29
SMAD3-214ENST00000560402 SPDYE5A6NIY4 337 aa16.88■□□□□ 0.29
SMAD3-214ENST00000560402 ATP2B3Q16720 1220 aa16.88■□□□□ 0.29
SMAD3-214ENST00000560402 DCAF15Q66K64 600 aa16.88■□□□□ 0.29
SMAD3-214ENST00000560402 APOBEC3HQ6NTF7 200 aaKnown RBP16.88■□□□□ 0.29
SMAD3-214ENST00000560402 ATG9AQ7Z3C6 839 aa16.88■□□□□ 0.29
SMAD3-214ENST00000560402 MS4A4AQ96JQ5 239 aa16.88■□□□□ 0.29
SMAD3-214ENST00000560402 GNL3LQ9NVN8 582 aaKnown RBP16.88■□□□□ 0.29
SMAD3-214ENST00000560402 AK9Q5TCS8 1911 aa16.88■□□□□ 0.29
SMAD3-214ENST00000560402 SEMA3EO15041 775 aa16.87■□□□□ 0.29
SMAD3-214ENST00000560402 INTS3Q68E01 1043 aaKnown RBP16.87■□□□□ 0.29
SMAD3-214ENST00000560402 PTPN18Q99952 460 aa16.87■□□□□ 0.29
SMAD3-214ENST00000560402 ZCCHC17Q9NP64 241 aaKnown RBP16.87■□□□□ 0.29
SMAD3-214ENST00000560402 CEP126Q9P2H0 1117 aa16.87■□□□□ 0.29
SMAD3-214ENST00000560402 SALL1Q9NSC2 1324 aa16.87■□□□□ 0.29
SMAD3-214ENST00000560402 MYH2Q9UKX2 1941 aa16.86■□□□□ 0.29
SMAD3-214ENST00000560402 CCL15-CCL14A0A0B4J2E2 113 aa16.86■□□□□ 0.29
SMAD3-214ENST00000560402 WDHD1O75717 1129 aaPredicted RBP16.86■□□□□ 0.29
SMAD3-214ENST00000560402 IL15P40933 162 aaPredicted RBP16.86■□□□□ 0.29
SMAD3-214ENST00000560402 CACNB3P54284 484 aa16.86■□□□□ 0.29
SMAD3-214ENST00000560402 SP3Q02447 781 aa16.86■□□□□ 0.29
SMAD3-214ENST00000560402 ARHGEF6Q15052 776 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms