RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	CTSW	P56202	376 aa		10.65	□□□□□ -0.7
NEO1-208	ENST00000560328	TMCO3	Q6UWJ1	677 aa		10.65	□□□□□ -0.7
NEO1-208	ENST00000560328	ZNF830	Q96NB3	372 aa	Predicted RBP	10.65	□□□□□ -0.7
NEO1-208	ENST00000560328	ANGEL1	Q9UNK9	670 aa	Known RBP	10.65	□□□□□ -0.7
NEO1-208	ENST00000560328	CLASP1	Q7Z460	1538 aa		10.65	□□□□□ -0.71
NEO1-208	ENST00000560328	SPDYE3	A6NKU9	549 aa		10.65	□□□□□ -0.71
NEO1-208	ENST00000560328	GSPT1	P15170	499 aa	Known RBP	10.65	□□□□□ -0.71
NEO1-208	ENST00000560328	USP8	P40818	1118 aa		10.65	□□□□□ -0.71
NEO1-208	ENST00000560328	EDC3	Q96F86	508 aa	Known RBP	10.65	□□□□□ -0.71
NEO1-208	ENST00000560328	CTAGE1	Q96RT6	745 aa		10.65	□□□□□ -0.71
NEO1-208	ENST00000560328	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.65	□□□□□ -0.71	4e-6	■■■■■ 27.4
NEO1-208	ENST00000560328	PRDM1	O75626	825 aa		10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	ZNF532	Q9HCE3	1301 aa		10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	HSPA4	P34932	840 aa		10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	SNW1	Q13573	536 aa	Known RBP	10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	WDR66	Q8TBY9	1149 aa		10.64	□□□□□ -0.71
NEO1-208	ENST00000560328		H0YHG0	523 aa		10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	PSMA7	O14818	248 aa		10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	EAF2	Q96CJ1	260 aa	Predicted RBP	10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	KRT79	Q5XKE5	535 aa		10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	ATL3	Q6DD88	541 aa		10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	LLPH	Q9BRT6	129 aa	Known RBP	10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	GBP3	Q9H0R5	595 aa		10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	STK32B	Q9NY57	414 aa		10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	SEPT7	Q16181	437 aa	Known RBP	10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	CCDC186	Q7Z3E2	898 aa		10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	TET3	O43151	1660 aa		10.64	□□□□□ -0.71
NEO1-208	ENST00000560328	GOLGA6L9	A6NEM1	432 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	MYCN	P04198	464 aa	Predicted RBP	10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	PAFAH1B1	P43034	410 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	CTDSPL2	Q05D32	466 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	PROSER3	Q2NL68	480 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	SPAG1	Q07617	926 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	DTHD1	Q6ZMT9	781 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	KRI1	Q8N9T8	703 aa	Known RBP	10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	MPHOSPH6	Q99547	160 aa	Known RBP	10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	ZNF521	Q96K83	1311 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	CDC42BPA	Q5VT25	1732 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	LMOD1	P29536	600 aa	Predicted RBP	10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	DEXI	O95424	95 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	CARD10	Q9BWT7	1032 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	DNAI2	Q9GZS0	605 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	MMRN2	Q9H8L6	949 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	ERBB4	Q15303	1308 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328		A0A1B0GVL5	298 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	ADCY10	Q96PN6	1610 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	ALS2CR12	Q96Q35	445 aa		10.63	□□□□□ -0.71
NEO1-208	ENST00000560328	SKIL	P12757	684 aa		10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	RPS8	P62241	208 aa	Known RBP	10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	ZNF174	Q15697	407 aa		10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	DPP8	Q6V1X1	898 aa	Predicted RBP	10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	LUZP1	Q86V48	1076 aa		10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	CRACR2A	Q9BSW2	395 aa		10.62	□□□□□ -0.71
NEO1-208	ENST00000560328		V9GY48	417 aa	Predicted RBP	10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	TAX1BP1	Q86VP1	789 aa		10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	BICD1	Q96G01	975 aa		10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	TAF3	Q5VWG9	929 aa		10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	CCDC66	A2RUB6	948 aa		10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	PCCA	P05165	728 aa	Predicted RBP	10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	GNG11	P61952	73 aa		10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	DSCC1	Q9BVC3	393 aa		10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	TSPYL1	Q9H0U9	437 aa		10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	GPCPD1	Q9NPB8	672 aa		10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	ASAP1	Q9ULH1	1129 aa		10.62	□□□□□ -0.71
NEO1-208	ENST00000560328	RILPL1	Q5EBL4	403 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	CEP135	Q66GS9	1140 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	FAM173B	Q6P4H8	233 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	PLIN2	Q99541	437 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	IQGAP3	Q86VI3	1631 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	VWA3A	A6NCI4	1184 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	AKR1B10	O60218	316 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	DTNB	O60941	627 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	NOP2	P46087	812 aa	Known RBP	10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	EIF6	P56537	245 aa	Known RBP	10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	LRRC24	Q50LG9	513 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	IQUB	Q8NA54	791 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	MYL10	Q9BUA6	226 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328		E7EWF7	191 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	OTUD7B	Q6GQQ9	843 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	CCDC174	Q6PII3	467 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	TMCO5B	A8MYB1	307 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328		H0YIN7	160 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	STX17	P56962	302 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	PLS1	Q14651	629 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	PRAMEF22	A3QJZ6	481 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	ZNF853	P0CG23	659 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	LETM2	Q2VYF4	491 aa		10.61	□□□□□ -0.71
NEO1-208	ENST00000560328	MAP3K15	Q6ZN16	1313 aa		10.6	□□□□□ -0.71
NEO1-208	ENST00000560328	FAM160A1	Q05DH4	1040 aa		10.6	□□□□□ -0.71
NEO1-208	ENST00000560328	MAP9	Q49MG5	647 aa		10.6	□□□□□ -0.71
NEO1-208	ENST00000560328	ARHGAP31	Q2M1Z3	1444 aa		10.6	□□□□□ -0.71
NEO1-208	ENST00000560328		A0A0D9SFI3	127 aa		10.6	□□□□□ -0.71
NEO1-208	ENST00000560328	APBA3	O96018	575 aa		10.6	□□□□□ -0.71
NEO1-208	ENST00000560328	ANO1	Q5XXA6	986 aa		10.6	□□□□□ -0.71
NEO1-208	ENST00000560328	SPAG5	Q96R06	1193 aa		10.6	□□□□□ -0.71

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