RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 TRPA1O75762 1119 aa28.92■■■□□ 2.22
CRNDE-209ENST00000560208 DZIP1LQ8IYY4 767 aaKnown RBP28.92■■■□□ 2.22
CRNDE-209ENST00000560208 GNAI3P08754 354 aa28.91■■■□□ 2.22
CRNDE-209ENST00000560208 CRKP46108 304 aa28.91■■■□□ 2.22
CRNDE-209ENST00000560208 SPDYE2Q495Y8 402 aa28.91■■■□□ 2.22
CRNDE-209ENST00000560208 LDLRAD1Q5T700 205 aa28.91■■■□□ 2.22
CRNDE-209ENST00000560208 TDRD3Q9H7E2 651 aaKnown RBP28.91■■■□□ 2.22
CRNDE-209ENST00000560208 CEP126Q9P2H0 1117 aa28.91■■■□□ 2.22
CRNDE-209ENST00000560208 ZNF70Q9UC06 446 aaPredicted RBP28.91■■■□□ 2.22
CRNDE-209ENST00000560208 FZD1Q9UP38 647 aa28.91■■■□□ 2.22
CRNDE-209ENST00000560208 RASA3Q14644 834 aa28.9■■■□□ 2.22
CRNDE-209ENST00000560208 SUPT20HL1Q3ZLR7 823 aa28.9■■■□□ 2.22
CRNDE-209ENST00000560208 PA2G4Q9UQ80 394 aaKnown RBP28.9■■■□□ 2.22
CRNDE-209ENST00000560208 PPP1R12BO60237 982 aaPredicted RBP28.89■■■□□ 2.22
CRNDE-209ENST00000560208 HDLBPQ00341 1268 aaKnown RBP28.89■■■□□ 2.22
CRNDE-209ENST00000560208 ABHD8Q96I13 439 aa28.89■■■□□ 2.22
CRNDE-209ENST00000560208 SSC5DA1L4H1 1573 aa28.88■■■□□ 2.21
CRNDE-209ENST00000560208 IL15P40933 162 aaPredicted RBP28.88■■■□□ 2.21
CRNDE-209ENST00000560208 TNFAIP1Q13829 316 aa28.88■■■□□ 2.21
CRNDE-209ENST00000560208 NBPF12Q5TAG4 269 aaPredicted RBP28.88■■■□□ 2.21
CRNDE-209ENST00000560208 COPRSQ9NQ92 184 aa28.88■■■□□ 2.21
CRNDE-209ENST00000560208 MKRN3Q13064 507 aaKnown RBP28.87■■■□□ 2.21
CRNDE-209ENST00000560208 MAP3K11Q16584 847 aa28.87■■■□□ 2.21
CRNDE-209ENST00000560208 ATP2B3Q16720 1220 aa28.87■■■□□ 2.21
CRNDE-209ENST00000560208 FTSJ3Q8IY81 847 aaKnown RBP28.87■■■□□ 2.21
CRNDE-209ENST00000560208 TEKT1Q969V4 418 aa28.86■■■□□ 2.21
CRNDE-209ENST00000560208 SUGT1Q9Y2Z0 365 aa28.86■■■□□ 2.21
CRNDE-209ENST00000560208 TMEM57Q8N5G2 664 aa28.84■■■□□ 2.21
CRNDE-209ENST00000560208 WDR66Q8TBY9 1149 aa28.84■■■□□ 2.21
CRNDE-209ENST00000560208 SLC10A4Q96EP9 437 aa28.84■■■□□ 2.21
CRNDE-209ENST00000560208 MRIQ9BWK5 157 aa28.84■■■□□ 2.21
CRNDE-209ENST00000560208 TCP10L2B9ZVM9 353 aa28.83■■■□□ 2.21
CRNDE-209ENST00000560208 SRGAP3O43295 1099 aa28.83■■■□□ 2.21
CRNDE-209ENST00000560208 TM4SF4P48230 202 aa28.83■■■□□ 2.21
CRNDE-209ENST00000560208 SPRYD7Q5W111 196 aa28.83■■■□□ 2.21
CRNDE-209ENST00000560208 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.83■■■□□ 2.21
CRNDE-209ENST00000560208 MAST3O60307 1309 aa28.83■■■□□ 2.21
CRNDE-209ENST00000560208 USP2O75604 605 aaPredicted RBP28.82■■■□□ 2.2
CRNDE-209ENST00000560208 MTX1Q13505 466 aa28.82■■■□□ 2.2
CRNDE-209ENST00000560208 CLMNQ96JQ2 1002 aa28.82■■■□□ 2.2
CRNDE-209ENST00000560208 ZDHHC15Q96MV8 337 aa28.82■■■□□ 2.2
CRNDE-209ENST00000560208 GNL3LQ9NVN8 582 aaKnown RBP28.82■■■□□ 2.2
CRNDE-209ENST00000560208 UNCXA6NJT0 531 aa28.81■■■□□ 2.2
CRNDE-209ENST00000560208 IREB2P48200 963 aaKnown RBP28.81■■■□□ 2.2
CRNDE-209ENST00000560208 TNNI2P48788 182 aa28.81■■■□□ 2.2
CRNDE-209ENST00000560208 DGKZQ13574 1117 aa28.81■■■□□ 2.2
CRNDE-209ENST00000560208 MCOLN1Q9GZU1 580 aa28.81■■■□□ 2.2
CRNDE-209ENST00000560208 GNAI2P04899 355 aa28.8■■■□□ 2.2
CRNDE-209ENST00000560208 RLBP1P12271 317 aa28.8■■■□□ 2.2
CRNDE-209ENST00000560208 SREBF2Q12772 1141 aa28.8■■■□□ 2.2
CRNDE-209ENST00000560208 TEPSINQ96N21 525 aa28.8■■■□□ 2.2
CRNDE-209ENST00000560208 PHKA1P46020 1223 aa28.79■■■□□ 2.2
CRNDE-209ENST00000560208 HHIPL2Q6UWX4 724 aa28.79■■■□□ 2.2
CRNDE-209ENST00000560208 ITPRIPQ8IWB1 547 aa28.79■■■□□ 2.2
CRNDE-209ENST00000560208 TMEM39BQ9GZU3 492 aa28.79■■■□□ 2.2
CRNDE-209ENST00000560208 ADORA1P30542 326 aa28.78■■■□□ 2.2
CRNDE-209ENST00000560208 CACNB3P54284 484 aa28.78■■■□□ 2.2
CRNDE-209ENST00000560208 APOBEC3HQ6NTF7 200 aaKnown RBP28.78■■■□□ 2.2
CRNDE-209ENST00000560208 CDAN1Q8IWY9 1227 aa28.78■■■□□ 2.2
CRNDE-209ENST00000560208 PANK1Q8TE04 598 aa28.78■■■□□ 2.2
CRNDE-209ENST00000560208 TIMM10P62072 90 aa28.77■■■□□ 2.2
CRNDE-209ENST00000560208 ANKRD13AQ8IZ07 590 aa28.77■■■□□ 2.2
CRNDE-209ENST00000560208 WNK4Q96J92 1243 aa28.77■■■□□ 2.2
CRNDE-209ENST00000560208 TMOD2Q9NZR1 351 aa28.77■■■□□ 2.2
CRNDE-209ENST00000560208 DENND2AQ9ULE3 1009 aa28.77■■■□□ 2.2
CRNDE-209ENST00000560208 SEMA3EO15041 775 aa28.76■■■□□ 2.19
CRNDE-209ENST00000560208 TBC1D8O95759 1140 aa28.76■■■□□ 2.19
CRNDE-209ENST00000560208 OTOFQ9HC10 1997 aa28.75■■■□□ 2.19
CRNDE-209ENST00000560208 ZBTB48P10074 688 aaPredicted RBP28.75■■■□□ 2.19
CRNDE-209ENST00000560208 TFCP2Q12800 502 aa28.75■■■□□ 2.19
CRNDE-209ENST00000560208 CCDC102BQ68D86 513 aa28.75■■■□□ 2.19
CRNDE-209ENST00000560208 MANSC4A6NHS7 340 aaPredicted RBP28.74■■■□□ 2.19
CRNDE-209ENST00000560208 CCDC85CA6NKD9 419 aa28.74■■■□□ 2.19
CRNDE-209ENST00000560208 PRDX5P30044 214 aa28.74■■■□□ 2.19
CRNDE-209ENST00000560208 FKBP1CQ5VVH2 108 aa28.74■■■□□ 2.19
CRNDE-209ENST00000560208 AKAP2Q9Y2D5 859 aa28.74■■■□□ 2.19
CRNDE-209ENST00000560208 A0A1B0GUL7 405 aa28.73■■■□□ 2.19
CRNDE-209ENST00000560208 LDHBP07195 334 aaKnown RBP28.73■■■□□ 2.19
CRNDE-209ENST00000560208 MS4A1P11836 297 aa28.73■■■□□ 2.19
CRNDE-209ENST00000560208 INHBEP58166 350 aa28.73■■■□□ 2.19
CRNDE-209ENST00000560208 FAM83AQ86UY5 434 aa28.73■■■□□ 2.19
CRNDE-209ENST00000560208 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.73■■■□□ 2.19
CRNDE-209ENST00000560208 LAMB1P07942 1786 aa28.73■■■□□ 2.19
CRNDE-209ENST00000560208 SALL1Q9NSC2 1324 aa28.72■■■□□ 2.19
CRNDE-209ENST00000560208 PNMA6EA0A0J9YXQ4 647 aa28.72■■■□□ 2.19
CRNDE-209ENST00000560208 ZBTB22O15209 634 aa28.72■■■□□ 2.19
CRNDE-209ENST00000560208 DIXDC1Q155Q3 683 aa28.72■■■□□ 2.19
CRNDE-209ENST00000560208 DAGLAQ9Y4D2 1042 aa28.72■■■□□ 2.19
CRNDE-209ENST00000560208 XAGE2Q96GT9 111 aa28.71■■■□□ 2.19
CRNDE-209ENST00000560208 GJA5P36382 358 aa28.7■■■□□ 2.18
CRNDE-209ENST00000560208 ELP3Q9H9T3 547 aa28.7■■■□□ 2.18
CRNDE-209ENST00000560208 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.7■■■□□ 2.18
CRNDE-209ENST00000560208 AK9Q5TCS8 1911 aa28.7■■■□□ 2.18
CRNDE-209ENST00000560208 MYH2Q9UKX2 1941 aa28.7■■■□□ 2.18
CRNDE-209ENST00000560208 ALDH1A1P00352 501 aa28.69■■■□□ 2.18
CRNDE-209ENST00000560208 MAP3K9P80192 1104 aa28.69■■■□□ 2.18
CRNDE-209ENST00000560208 G3BP1Q13283 466 aaKnown RBP eCLIP28.69■■■□□ 2.18
CRNDE-209ENST00000560208 RASGRF1Q13972 1273 aa28.69■■■□□ 2.18
CRNDE-209ENST00000560208 MVPQ14764 893 aaKnown RBP28.69■■■□□ 2.18
CRNDE-209ENST00000560208 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms