RNA–Protein interactions for RNA: ENST00000560153.2

LINC00052-201, long intergenic non-protein coding RNA 52, humanhuman

TSL 2 BASIC

Gene LINC00052, Length 1,966 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052-201ENST00000560153 SDF4Q9BRK5 362 aa13.51□□□□□ -0.25
LINC00052-201ENST00000560153 DBNLQ9UJU6 430 aaKnown RBP13.51□□□□□ -0.25
LINC00052-201ENST00000560153 USP27XA6NNY8 438 aa13.51□□□□□ -0.25
LINC00052-201ENST00000560153 RABL6Q3YEC7 729 aaPredicted RBP13.51□□□□□ -0.25
LINC00052-201ENST00000560153 KRT28Q7Z3Y7 464 aa13.51□□□□□ -0.25
LINC00052-201ENST00000560153 BRAPQ7Z569 592 aa13.51□□□□□ -0.25
LINC00052-201ENST00000560153 GPR108Q9NPR9 543 aa13.51□□□□□ -0.25
LINC00052-201ENST00000560153 USP16Q9Y5T5 823 aa13.51□□□□□ -0.25
LINC00052-201ENST00000560153 PLEKHG2Q9H7P9 1386 aa13.5□□□□□ -0.25
LINC00052-201ENST00000560153 DHX16O60231 1041 aaKnown RBP13.5□□□□□ -0.25
LINC00052-201ENST00000560153 RFX5P48382 616 aaPredicted RBP13.5□□□□□ -0.25
LINC00052-201ENST00000560153 NLRP12P59046 1061 aa13.5□□□□□ -0.25
LINC00052-201ENST00000560153 CEBPZQ03701 1054 aaKnown RBP13.5□□□□□ -0.25
LINC00052-201ENST00000560153 ELF2Q15723 593 aa13.5□□□□□ -0.25
LINC00052-201ENST00000560153 PHLPP2Q6ZVD8 1323 aa13.5□□□□□ -0.25
LINC00052-201ENST00000560153 FCHSD1Q86WN1 690 aa13.5□□□□□ -0.25
LINC00052-201ENST00000560153 MORC4Q8TE76 937 aa13.5□□□□□ -0.25
LINC00052-201ENST00000560153 CALCOCO1Q9P1Z2 691 aa13.5□□□□□ -0.25
LINC00052-201ENST00000560153 KIAA1468Q9P260 1216 aa13.5□□□□□ -0.25
LINC00052-201ENST00000560153 KIF1AQ12756 1690 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 CARMIL3Q8ND23 1372 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 IKBKBO14920 756 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 ATP8B1O43520 1251 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 PARNO95453 639 aaKnown RBP13.49□□□□□ -0.25
LINC00052-201ENST00000560153 H2AFXP16104 143 aaPredicted RBP13.49□□□□□ -0.25
LINC00052-201ENST00000560153 AIMP1Q12904 312 aaKnown RBP13.49□□□□□ -0.25
LINC00052-201ENST00000560153 COL9A3Q14050 684 aaPredicted RBP13.49□□□□□ -0.25
LINC00052-201ENST00000560153 PDIA6Q15084 440 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 SF3A1Q15459 793 aaKnown RBP13.49□□□□□ -0.25
LINC00052-201ENST00000560153 FBXO38Q6PIJ6 1188 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 POLR3EQ9NVU0 708 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.49□□□□□ -0.25
LINC00052-201ENST00000560153 ARFGEF2Q9Y6D5 1785 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 CTDNEP1O95476 244 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 PTPN12Q05209 780 aaKnown RBP13.49□□□□□ -0.25
LINC00052-201ENST00000560153 TFCP2Q12800 502 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 STK38Q15208 465 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 DDX17Q92841 729 aaKnown RBP13.49□□□□□ -0.25
LINC00052-201ENST00000560153 PPP1R13BQ96KQ4 1090 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 TIGD1Q96MW7 591 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 MYD88Q99836 296 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 MTA3Q9BTC8 594 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 TRMT1Q9NXH9 659 aaKnown RBP13.49□□□□□ -0.25
LINC00052-201ENST00000560153 PCDHA7Q9UN72 937 aa13.49□□□□□ -0.25
LINC00052-201ENST00000560153 SMC2O95347 1197 aa13.48□□□□□ -0.25
LINC00052-201ENST00000560153 EVCP57679 992 aa13.48□□□□□ -0.25
LINC00052-201ENST00000560153 APOBRQ0VD83 1088 aa13.48□□□□□ -0.25
LINC00052-201ENST00000560153 NAA30Q147X3 362 aaPredicted RBP13.48□□□□□ -0.25
LINC00052-201ENST00000560153 ARID5BQ14865 1188 aa13.48□□□□□ -0.25
LINC00052-201ENST00000560153 TMC6Q7Z403 805 aa13.48□□□□□ -0.25
LINC00052-201ENST00000560153 NBPF11Q86T75 865 aa13.48□□□□□ -0.25
LINC00052-201ENST00000560153 CERKQ8TCT0 537 aa13.48□□□□□ -0.25
LINC00052-201ENST00000560153 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC00052-201ENST00000560153 SLC3A2P08195 630 aaKnown RBP13.47□□□□□ -0.25
LINC00052-201ENST00000560153 CCDC93Q567U6 631 aa13.47□□□□□ -0.25
LINC00052-201ENST00000560153 ZMYM1Q5SVZ6 1142 aa13.47□□□□□ -0.25
LINC00052-201ENST00000560153 STOX1Q6ZVD7 989 aa13.47□□□□□ -0.25
LINC00052-201ENST00000560153 LINC00301Q8NCQ3 95 aa13.47□□□□□ -0.25
LINC00052-201ENST00000560153 ANKRD24Q8TF21 1146 aa13.47□□□□□ -0.25
LINC00052-201ENST00000560153 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC00052-201ENST00000560153 LAMB4A4D0S4 1761 aa13.47□□□□□ -0.25
LINC00052-201ENST00000560153 PDIA3P30101 505 aaKnown RBP13.47□□□□□ -0.25
LINC00052-201ENST00000560153 TEX35Q5T0J7 233 aa13.47□□□□□ -0.25
LINC00052-201ENST00000560153 E4F1Q66K89 784 aaPredicted RBP13.47□□□□□ -0.25
LINC00052-201ENST00000560153 CCDC129Q6ZRS4 1044 aa13.47□□□□□ -0.25
LINC00052-201ENST00000560153 XAGE3Q8WTP9 111 aa13.47□□□□□ -0.25
LINC00052-201ENST00000560153 PNMA2Q9UL42 364 aa13.47□□□□□ -0.25
LINC00052-201ENST00000560153 GOLGA6L9A6NEM1 432 aa13.46□□□□□ -0.25
LINC00052-201ENST00000560153 E7EWF7 191 aa13.46□□□□□ -0.25
LINC00052-201ENST00000560153 SPTLC2O15270 562 aa13.46□□□□□ -0.25
LINC00052-201ENST00000560153 TOM1O60784 492 aa13.46□□□□□ -0.25
LINC00052-201ENST00000560153 PAX3P23760 479 aa13.46□□□□□ -0.25
LINC00052-201ENST00000560153 ZNF790Q6PG37 636 aa13.46□□□□□ -0.25
LINC00052-201ENST00000560153 ANKRD13DQ6ZTN6 518 aa13.46□□□□□ -0.25
LINC00052-201ENST00000560153 ARHGEF25Q86VW2 580 aa13.46□□□□□ -0.25
LINC00052-201ENST00000560153 EDC3Q96F86 508 aaKnown RBP13.46□□□□□ -0.25
LINC00052-201ENST00000560153 C8orf76Q96K31 380 aa13.46□□□□□ -0.25
LINC00052-201ENST00000560153 DBNDD2Q9BQY9 259 aa13.46□□□□□ -0.25
LINC00052-201ENST00000560153 XPO4Q9C0E2 1151 aaKnown RBP13.46□□□□□ -0.25
LINC00052-201ENST00000560153 PAG1Q9NWQ8 432 aa13.46□□□□□ -0.25
LINC00052-201ENST00000560153 WDR19Q8NEZ3 1342 aa13.46□□□□□ -0.26
LINC00052-201ENST00000560153 ZSCAN12O43309 604 aa13.45□□□□□ -0.26
LINC00052-201ENST00000560153 SYNE3Q6ZMZ3 975 aa13.45□□□□□ -0.26
LINC00052-201ENST00000560153 JMYQ8N9B5 988 aa13.45□□□□□ -0.26
LINC00052-201ENST00000560153 KLHDC4Q8TBB5 520 aa13.45□□□□□ -0.26
LINC00052-201ENST00000560153 PMM1Q92871 262 aa13.45□□□□□ -0.26
LINC00052-201ENST00000560153 LRRC59Q96AG4 307 aaKnown RBP13.45□□□□□ -0.26
LINC00052-201ENST00000560153 NOL10Q9BSC4 688 aaKnown RBP13.45□□□□□ -0.26
LINC00052-201ENST00000560153 IFNKQ9P0W0 207 aa13.45□□□□□ -0.26
LINC00052-201ENST00000560153 DDX60Q8IY21 1712 aaKnown RBP13.45□□□□□ -0.26
LINC00052-201ENST00000560153 ERBB3P21860 1342 aa13.45□□□□□ -0.26
LINC00052-201ENST00000560153 CMA1P23946 247 aa13.45□□□□□ -0.26
LINC00052-201ENST00000560153 ETF1P62495 437 aaKnown RBP13.45□□□□□ -0.26
LINC00052-201ENST00000560153 CCT2P78371 535 aaKnown RBP13.45□□□□□ -0.26
LINC00052-201ENST00000560153 LONRF3Q496Y0 759 aa13.45□□□□□ -0.26
LINC00052-201ENST00000560153 EPHA10Q5JZY3 1008 aa13.45□□□□□ -0.26
LINC00052-201ENST00000560153 LRRC2Q9BYS8 371 aa13.45□□□□□ -0.26
LINC00052-201ENST00000560153 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00052-201ENST00000560153 SOS2Q07890 1332 aaPredicted RBP13.44□□□□□ -0.26
LINC00052-201ENST00000560153 RNF113AO15541 343 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms