RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 MFSD14BQ5SR56 506 aa14.06□□□□□ -0.16
HERC1-204ENST00000559715 TDRD3Q9H7E2 651 aaKnown RBP14.06□□□□□ -0.16
HERC1-204ENST00000559715 VEZTQ9HBM0 779 aa14.06□□□□□ -0.16
HERC1-204ENST00000559715 CNNM1Q9NRU3 951 aa14.06□□□□□ -0.16
HERC1-204ENST00000559715 SERPINA10Q9UK55 444 aa14.06□□□□□ -0.16
HERC1-204ENST00000559715 ZSWIM8A7E2V4 1837 aa14.06□□□□□ -0.16
HERC1-204ENST00000559715 POTEFA5A3E0 1075 aa14.05□□□□□ -0.16
HERC1-204ENST00000559715 HIBADHP31937 336 aaKnown RBP14.05□□□□□ -0.16
HERC1-204ENST00000559715 CRHR2Q13324 411 aa14.05□□□□□ -0.16
HERC1-204ENST00000559715 LRRC24Q50LG9 513 aa14.05□□□□□ -0.16
HERC1-204ENST00000559715 DZIP1LQ8IYY4 767 aaKnown RBP14.05□□□□□ -0.16
HERC1-204ENST00000559715 SRCIN1Q9C0H9 1055 aa14.05□□□□□ -0.16
HERC1-204ENST00000559715 TTF2Q9UNY4 1162 aaKnown RBP14.05□□□□□ -0.16
HERC1-204ENST00000559715 MYO1BO43795 1136 aa14.04□□□□□ -0.16
HERC1-204ENST00000559715 ANKRD13AQ8IZ07 590 aa14.04□□□□□ -0.16
HERC1-204ENST00000559715 TMEM39BQ9GZU3 492 aa14.04□□□□□ -0.16
HERC1-204ENST00000559715 BICC1Q9H694 974 aaKnown RBP14.04□□□□□ -0.16
HERC1-204ENST00000559715 C9orf78Q9NZ63 289 aaPredicted RBP14.04□□□□□ -0.16
HERC1-204ENST00000559715 CRKP46108 304 aa14.03□□□□□ -0.16
HERC1-204ENST00000559715 IREB2P48200 963 aaKnown RBP14.03□□□□□ -0.16
HERC1-204ENST00000559715 MRPL50Q8N5N7 158 aaKnown RBP14.03□□□□□ -0.16
HERC1-204ENST00000559715 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.03□□□□□ -0.16
HERC1-204ENST00000559715 BRI3BPQ8WY22 251 aa14.03□□□□□ -0.16
HERC1-204ENST00000559715 PCDH10Q9P2E7 1040 aa14.03□□□□□ -0.16
HERC1-204ENST00000559715 PTPN22Q9Y2R2 807 aa14.03□□□□□ -0.16
HERC1-204ENST00000559715 TRIM17Q9Y577 477 aa14.03□□□□□ -0.16
HERC1-204ENST00000559715 MYH13Q9UKX3 1938 aa14.02□□□□□ -0.16
HERC1-204ENST00000559715 RBM5P52756 815 aaKnown RBP eCLIP14.02□□□□□ -0.17
HERC1-204ENST00000559715 SLC4A10Q6U841 1118 aa14.02□□□□□ -0.17
HERC1-204ENST00000559715 KLHDC4Q8TBB5 520 aa14.02□□□□□ -0.17
HERC1-204ENST00000559715 CD99L2Q8TCZ2 262 aa14.02□□□□□ -0.17
HERC1-204ENST00000559715 OPTNQ96CV9 577 aa14.02□□□□□ -0.17
HERC1-204ENST00000559715 USP44Q9H0E7 712 aa14.02□□□□□ -0.17
HERC1-204ENST00000559715 ELP3Q9H9T3 547 aa14.02□□□□□ -0.17
HERC1-204ENST00000559715 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.02□□□□□ -0.17
HERC1-204ENST00000559715 IQSEC3Q9UPP2 1182 aaPredicted RBP14.02□□□□□ -0.17
HERC1-204ENST00000559715 MROH5Q6ZUA9 1318 aa14.01□□□□□ -0.17
HERC1-204ENST00000559715 TCP10L2B9ZVM9 353 aa14.01□□□□□ -0.17
HERC1-204ENST00000559715 FGFR2P21802 821 aa14.01□□□□□ -0.17
HERC1-204ENST00000559715 RFX5P48382 616 aaPredicted RBP14.01□□□□□ -0.17
HERC1-204ENST00000559715 HDLBPQ00341 1268 aaKnown RBP14.01□□□□□ -0.17
HERC1-204ENST00000559715 VGLL4Q14135 290 aa14.01□□□□□ -0.17
HERC1-204ENST00000559715 TAF7LQ5H9L4 462 aa14.01□□□□□ -0.17
HERC1-204ENST00000559715 APOBEC3HQ6NTF7 200 aaKnown RBP14.01□□□□□ -0.17
HERC1-204ENST00000559715 ARMC5Q96C12 935 aa14.01□□□□□ -0.17
HERC1-204ENST00000559715 MRIQ9BWK5 157 aa14.01□□□□□ -0.17
HERC1-204ENST00000559715 PDE8BO95263 885 aa14□□□□□ -0.17
HERC1-204ENST00000559715 BCAMP50895 628 aa14□□□□□ -0.17
HERC1-204ENST00000559715 CACNB3P54284 484 aa14□□□□□ -0.17
HERC1-204ENST00000559715 FAM43AQ8N2R8 423 aa14□□□□□ -0.17
HERC1-204ENST00000559715 MAP3K9P80192 1104 aa13.99□□□□□ -0.17
HERC1-204ENST00000559715 SP3Q02447 781 aa13.99□□□□□ -0.17
HERC1-204ENST00000559715 TNFAIP1Q13829 316 aa13.99□□□□□ -0.17
HERC1-204ENST00000559715 ERO1AQ96HE7 468 aa13.99□□□□□ -0.17
HERC1-204ENST00000559715 ZDHHC15Q96MV8 337 aa13.99□□□□□ -0.17
HERC1-204ENST00000559715 SNCAIPQ9Y6H5 919 aa13.99□□□□□ -0.17
HERC1-204ENST00000559715 SPDYE5A6NIY4 337 aa13.98□□□□□ -0.17
HERC1-204ENST00000559715 ANP32CO43423 234 aa13.98□□□□□ -0.17
HERC1-204ENST00000559715 INTS3Q68E01 1043 aaKnown RBP13.98□□□□□ -0.17
HERC1-204ENST00000559715 FAM9BQ8IZU0 186 aa13.98□□□□□ -0.17
HERC1-204ENST00000559715 SSH1Q8WYL5 1049 aa13.98□□□□□ -0.17
HERC1-204ENST00000559715 TRIOBPQ9H2D6 2365 aa13.98□□□□□ -0.17
HERC1-204ENST00000559715 KIF16BQ96L93 1317 aa13.97□□□□□ -0.17
HERC1-204ENST00000559715 EN2P19622 333 aaPredicted RBP13.97□□□□□ -0.17
HERC1-204ENST00000559715 FKBP1CQ5VVH2 108 aa13.97□□□□□ -0.17
HERC1-204ENST00000559715 OTUD7BQ6GQQ9 843 aa13.97□□□□□ -0.17
HERC1-204ENST00000559715 ATG9AQ7Z3C6 839 aa13.97□□□□□ -0.17
HERC1-204ENST00000559715 FAM83AQ86UY5 434 aa13.97□□□□□ -0.17
HERC1-204ENST00000559715 EFCC1Q9HA90 598 aa13.97□□□□□ -0.17
HERC1-204ENST00000559715 LAMA3Q16787 3333 aa13.96□□□□□ -0.17
HERC1-204ENST00000559715 CCL15-CCL14A0A0B4J2E2 113 aa13.96□□□□□ -0.17
HERC1-204ENST00000559715 ZNF316A6NFI3 1004 aaPredicted RBP13.96□□□□□ -0.17
HERC1-204ENST00000559715 CHAF1AQ13111 956 aaPredicted RBP13.96□□□□□ -0.17
HERC1-204ENST00000559715 CCL15Q16663 113 aa13.96□□□□□ -0.17
HERC1-204ENST00000559715 METTL24Q5JXM2 366 aa13.96□□□□□ -0.17
HERC1-204ENST00000559715 TBC1D22AQ8WUA7 517 aa13.96□□□□□ -0.17
HERC1-204ENST00000559715 ZKSCAN4Q969J2 545 aaPredicted RBP13.96□□□□□ -0.17
HERC1-204ENST00000559715 TEKT1Q969V4 418 aa13.96□□□□□ -0.17
HERC1-204ENST00000559715 ZNF333Q96JL9 665 aa13.96□□□□□ -0.17
HERC1-204ENST00000559715 PTPRCP08575 1304 aa13.95□□□□□ -0.18
HERC1-204ENST00000559715 IRF6O14896 467 aa13.95□□□□□ -0.18
HERC1-204ENST00000559715 CTGFP29279 349 aa13.95□□□□□ -0.18
HERC1-204ENST00000559715 GTF2A2P52657 109 aa13.95□□□□□ -0.18
HERC1-204ENST00000559715 MOGSQ13724 837 aa13.95□□□□□ -0.18
HERC1-204ENST00000559715 HHIPL2Q6UWX4 724 aa13.95□□□□□ -0.18
HERC1-204ENST00000559715 OTUD5Q96G74 571 aa13.95□□□□□ -0.18
HERC1-204ENST00000559715 ARHGAP39Q9C0H5 1083 aa13.95□□□□□ -0.18
HERC1-204ENST00000559715 SUGT1Q9Y2Z0 365 aa13.95□□□□□ -0.18
HERC1-204ENST00000559715 RPAP1Q9BWH6 1393 aaPredicted RBP13.95□□□□□ -0.18
HERC1-204ENST00000559715 AK9Q5TCS8 1911 aa13.94□□□□□ -0.18
HERC1-204ENST00000559715 BTBD19C9JJ37 291 aa13.94□□□□□ -0.18
HERC1-204ENST00000559715 EYA2O00167 538 aa13.94□□□□□ -0.18
HERC1-204ENST00000559715 TNNI2P48788 182 aa13.94□□□□□ -0.18
HERC1-204ENST00000559715 SLFN5Q08AF3 891 aa13.94□□□□□ -0.18
HERC1-204ENST00000559715 TAF1CQ15572 869 aaPredicted RBP13.94□□□□□ -0.18
HERC1-204ENST00000559715 ERO1BQ86YB8 467 aa13.94□□□□□ -0.18
HERC1-204ENST00000559715 TRMT2AQ8IZ69 625 aaKnown RBP13.94□□□□□ -0.18
HERC1-204ENST00000559715 ZNF112Q9UJU3 913 aa13.94□□□□□ -0.18
HERC1-204ENST00000559715 PTCH2Q9Y6C5 1203 aa13.94□□□□□ -0.18
HERC1-204ENST00000559715 PTPRFP10586 1907 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms