RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 SPON1Q9HCB6 807 aa20.79■□□□□ 0.92
CHRNA3-206ENST00000559658 SNX14Q9Y5W7 946 aa20.79■□□□□ 0.92
CHRNA3-206ENST00000559658 ERICH6Q7L0X2 663 aa20.79■□□□□ 0.92
CHRNA3-206ENST00000559658 EYA3Q99504 573 aa20.79■□□□□ 0.92
CHRNA3-206ENST00000559658 MYH2Q9UKX2 1941 aa20.78■□□□□ 0.92
CHRNA3-206ENST00000559658 DALRD3Q5D0E6 543 aaKnown RBP20.78■□□□□ 0.92
CHRNA3-206ENST00000559658 TTLL5Q6EMB2 1281 aa20.78■□□□□ 0.92
CHRNA3-206ENST00000559658 CERS5Q8N5B7 392 aa20.78■□□□□ 0.92
CHRNA3-206ENST00000559658 FBXW7Q969H0 707 aa20.78■□□□□ 0.92
CHRNA3-206ENST00000559658 ZNF277Q9NRM2 450 aaPredicted RBP20.78■□□□□ 0.92
CHRNA3-206ENST00000559658 SLC27A2O14975 620 aa20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 DIXDC1Q155Q3 683 aa20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 MFSD14BQ5SR56 506 aa20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 CREB3L3Q68CJ9 461 aa20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 WDR66Q8TBY9 1149 aa20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 EPB41L2O43491 1005 aaKnown RBP20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 PRKAB2O43741 272 aa20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 ECE2O60344 883 aa20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 DYNLL1P63167 89 aaKnown RBP20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 KIAA2012Q0VF49 1180 aa20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 ADCK5Q3MIX3 580 aa20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 CC2D2BQ6DHV5 1058 aa20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 NAA16Q6N069 864 aaPredicted RBP20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 IPO9Q96P70 1041 aaKnown RBP20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 STRBPQ96SI9 672 aaKnown RBP20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 BCS1LQ9Y276 419 aa20.77■□□□□ 0.92
CHRNA3-206ENST00000559658 FAM205AQ6ZU69 1335 aa20.76■□□□□ 0.91
CHRNA3-206ENST00000559658 PPIP5K2O43314 1243 aa20.76■□□□□ 0.91
CHRNA3-206ENST00000559658 MCCP23508 829 aa20.76■□□□□ 0.91
CHRNA3-206ENST00000559658 AIDAQ96BJ3 306 aa20.76■□□□□ 0.91
CHRNA3-206ENST00000559658 ARFGEF1Q9Y6D6 1849 aa20.76■□□□□ 0.91
CHRNA3-206ENST00000559658 YDJCA8MPS7 323 aa20.75■□□□□ 0.91
CHRNA3-206ENST00000559658 LDHBP07195 334 aaKnown RBP20.75■□□□□ 0.91
CHRNA3-206ENST00000559658 CPA1P15085 419 aa20.75■□□□□ 0.91
CHRNA3-206ENST00000559658 RIOK1Q9BRS2 568 aaKnown RBP20.75■□□□□ 0.91
CHRNA3-206ENST00000559658 DSCC1Q9BVC3 393 aa20.75■□□□□ 0.91
CHRNA3-206ENST00000559658 UPF3BQ9BZI7 483 aaKnown RBP20.75■□□□□ 0.91
CHRNA3-206ENST00000559658 FHDC1Q9C0D6 1143 aaPredicted RBP20.75■□□□□ 0.91
CHRNA3-206ENST00000559658 EPB41L4AQ9HCS5 686 aaPredicted RBP20.75■□□□□ 0.91
CHRNA3-206ENST00000559658 LAMA4Q16363 1823 aa20.75■□□□□ 0.91
CHRNA3-206ENST00000559658 CYP21A2P08686 494 aa20.75■□□□□ 0.91
CHRNA3-206ENST00000559658 DZIP1Q86YF9 867 aaKnown RBP20.75■□□□□ 0.91
CHRNA3-206ENST00000559658 KCNB2Q92953 911 aa20.75■□□□□ 0.91
CHRNA3-206ENST00000559658 PSME4Q14997 1843 aa20.75■□□□□ 0.91
CHRNA3-206ENST00000559658 RTKN2Q8IZC4 609 aa20.74■□□□□ 0.91
CHRNA3-206ENST00000559658 PSMD1Q99460 953 aa20.74■□□□□ 0.91
CHRNA3-206ENST00000559658 TBC1D2Q9BYX2 928 aa20.74■□□□□ 0.91
CHRNA3-206ENST00000559658 BAZ2AQ9UIF9 1905 aaKnown RBP20.74■□□□□ 0.91
CHRNA3-206ENST00000559658 G3V3G9 751 aa20.73■□□□□ 0.91
CHRNA3-206ENST00000559658 NFKBIEO00221 500 aa20.73■□□□□ 0.91
CHRNA3-206ENST00000559658 DCAF8Q5TAQ9 597 aa20.73■□□□□ 0.91
CHRNA3-206ENST00000559658 IL17RAQ96F46 866 aa20.73■□□□□ 0.91
CHRNA3-206ENST00000559658 AATFQ9NY61 560 aaKnown RBP eCLIP20.73■□□□□ 0.91
CHRNA3-206ENST00000559658 CDK5RAP2Q96SN8 1893 aa20.73■□□□□ 0.91
CHRNA3-206ENST00000559658 F8W031 263 aaPredicted RBP20.73■□□□□ 0.91
CHRNA3-206ENST00000559658 ANAPC15P60006 121 aa20.73■□□□□ 0.91
CHRNA3-206ENST00000559658 STOX1Q6ZVD7 989 aa20.73■□□□□ 0.91
CHRNA3-206ENST00000559658 U3KPZ7 1027 aaPredicted RBP20.73■□□□□ 0.91
CHRNA3-206ENST00000559658 MAGEB6P1A0A0J9YX57 407 aa20.72■□□□□ 0.91
CHRNA3-206ENST00000559658 FGAP02671 866 aa20.72■□□□□ 0.91
CHRNA3-206ENST00000559658 HAND2P61296 217 aa20.72■□□□□ 0.91
CHRNA3-206ENST00000559658 RABEP1Q15276 862 aa20.72■□□□□ 0.91
CHRNA3-206ENST00000559658 ZGPATQ8N5A5 531 aaKnown RBP20.72■□□□□ 0.91
CHRNA3-206ENST00000559658 SDR42E1Q8WUS8 393 aa20.72■□□□□ 0.91
CHRNA3-206ENST00000559658 RPAP1Q9BWH6 1393 aaPredicted RBP20.71■□□□□ 0.91
CHRNA3-206ENST00000559658 PRELPP51888 382 aa20.71■□□□□ 0.91
CHRNA3-206ENST00000559658 PODNQ7Z5L7 613 aa20.71■□□□□ 0.91
CHRNA3-206ENST00000559658 SUPT20HQ8NEM7 779 aa20.71■□□□□ 0.91
CHRNA3-206ENST00000559658 GSG1L2A8MUP6 293 aa20.71■□□□□ 0.91
CHRNA3-206ENST00000559658 RASSF7Q02833 373 aa20.71■□□□□ 0.91
CHRNA3-206ENST00000559658 SPTY2D1Q68D10 685 aaPredicted RBP20.71■□□□□ 0.91
CHRNA3-206ENST00000559658 NBPF3Q9H094 633 aa20.71■□□□□ 0.91
CHRNA3-206ENST00000559658 SLC4A4Q9Y6R1 1079 aa20.71■□□□□ 0.91
CHRNA3-206ENST00000559658 SMIM22K7EJ46 135 aa20.7■□□□□ 0.9
CHRNA3-206ENST00000559658 APPP05067 770 aa20.7■□□□□ 0.9
CHRNA3-206ENST00000559658 DDRGK1Q96HY6 314 aa20.7■□□□□ 0.9
CHRNA3-206ENST00000559658 JAKMIP1Q96N16 626 aaKnown RBP20.7■□□□□ 0.9
CHRNA3-206ENST00000559658 DACT2Q5SW24 774 aa20.69■□□□□ 0.9
CHRNA3-206ENST00000559658 LARGE2Q8N3Y3 721 aa20.69■□□□□ 0.9
CHRNA3-206ENST00000559658 TBC1D22AQ8WUA7 517 aa20.69■□□□□ 0.9
CHRNA3-206ENST00000559658 CASTP20810 708 aaKnown RBP20.69■□□□□ 0.9
CHRNA3-206ENST00000559658 NEK4P51957 841 aa20.69■□□□□ 0.9
CHRNA3-206ENST00000559658 TAOK3Q9H2K8 898 aa20.69■□□□□ 0.9
CHRNA3-206ENST00000559658 MROH7-TTC4A0A0A0MT08 1334 aa20.68■□□□□ 0.9
CHRNA3-206ENST00000559658 SCNN1DP51172 638 aa20.68■□□□□ 0.9
CHRNA3-206ENST00000559658 EVX2Q03828 476 aa20.68■□□□□ 0.9
CHRNA3-206ENST00000559658 SOGA3Q5TF21 947 aa20.68■□□□□ 0.9
CHRNA3-206ENST00000559658 NKX2-3Q8TAU0 364 aa20.68■□□□□ 0.9
CHRNA3-206ENST00000559658 TCEANC2Q96MN5 208 aa20.68■□□□□ 0.9
CHRNA3-206ENST00000559658 IARSP41252 1262 aaKnown RBP20.67■□□□□ 0.9
CHRNA3-206ENST00000559658 GRIPAP1Q4V328 841 aa20.67■□□□□ 0.9
CHRNA3-206ENST00000559658 IFNL3Q8IZI9 196 aa20.67■□□□□ 0.9
CHRNA3-206ENST00000559658 PCDHAC2Q9Y5I4 1007 aa20.67■□□□□ 0.9
CHRNA3-206ENST00000559658 TIAM2Q8IVF5 1701 aa20.67■□□□□ 0.9
CHRNA3-206ENST00000559658 PATL2C9JE40 543 aaKnown RBP20.67■□□□□ 0.9
CHRNA3-206ENST00000559658 RAD17O75943 681 aa20.67■□□□□ 0.9
CHRNA3-206ENST00000559658 ZKSCAN1P17029 563 aaPredicted RBP20.67■□□□□ 0.9
CHRNA3-206ENST00000559658 NOL8Q76FK4 1167 aaKnown RBP20.67■□□□□ 0.9
CHRNA3-206ENST00000559658 TBC1D10CQ8IV04 446 aa20.67■□□□□ 0.9
CHRNA3-206ENST00000559658 SH3RF3Q8TEJ3 882 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms