RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 DEFB129Q9H1M3 183 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 TDRD3Q9H7E2 651 aaKnown RBP10.13□□□□□ -0.79
SNX1-207ENST00000559401 SERPINA10Q9UK55 444 aa10.13□□□□□ -0.79
SNX1-207ENST00000559401 UBE2Q2LH0YL09 131 aa10.12□□□□□ -0.79
SNX1-207ENST00000559401 SURF6O75683 361 aaKnown RBP10.12□□□□□ -0.79
SNX1-207ENST00000559401 MAP2K2P36507 400 aa10.12□□□□□ -0.79
SNX1-207ENST00000559401 FKBP1BP68106 108 aa10.12□□□□□ -0.79
SNX1-207ENST00000559401 ATP8B2P98198 1209 aa10.12□□□□□ -0.79
SNX1-207ENST00000559401 NOGQ13253 232 aa10.12□□□□□ -0.79
SNX1-207ENST00000559401 TNFAIP1Q13829 316 aa10.12□□□□□ -0.79
SNX1-207ENST00000559401 CCDC102BQ68D86 513 aa10.12□□□□□ -0.79
SNX1-207ENST00000559401 CCDC102AQ96A19 550 aa10.12□□□□□ -0.79
SNX1-207ENST00000559401 WBP1LQ9NX94 342 aa10.12□□□□□ -0.79
SNX1-207ENST00000559401 TMOD2Q9NZR1 351 aa10.12□□□□□ -0.79
SNX1-207ENST00000559401 DENND2AQ9ULE3 1009 aa10.12□□□□□ -0.79
SNX1-207ENST00000559401 COG6Q9Y2V7 657 aa10.12□□□□□ -0.79
SNX1-207ENST00000559401 AOX1Q06278 1338 aa10.11□□□□□ -0.79
SNX1-207ENST00000559401 TCP10L2B9ZVM9 353 aa10.11□□□□□ -0.79
SNX1-207ENST00000559401 SEMA3EO15041 775 aa10.11□□□□□ -0.79
SNX1-207ENST00000559401 ZBTB7BO15156 539 aaPredicted RBP10.11□□□□□ -0.79
SNX1-207ENST00000559401 LDHBP07195 334 aaKnown RBP10.11□□□□□ -0.79
SNX1-207ENST00000559401 TNNI2P48788 182 aa10.11□□□□□ -0.79
SNX1-207ENST00000559401 CTCFP49711 727 aaPredicted RBP10.11□□□□□ -0.79
SNX1-207ENST00000559401 MVPQ14764 893 aaKnown RBP10.11□□□□□ -0.79
SNX1-207ENST00000559401 SPDYE2Q495Y8 402 aa10.11□□□□□ -0.79
SNX1-207ENST00000559401 ARMC9Q7Z3E5 817 aa10.11□□□□□ -0.79
SNX1-207ENST00000559401 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.11□□□□□ -0.79
SNX1-207ENST00000559401 XAGE2Q96GT9 111 aa10.11□□□□□ -0.79
SNX1-207ENST00000559401 ZNF70Q9UC06 446 aaPredicted RBP10.11□□□□□ -0.79
SNX1-207ENST00000559401 ANGEL1Q9UNK9 670 aaKnown RBP10.11□□□□□ -0.79
SNX1-207ENST00000559401 PPP2R3BQ9Y5P8 575 aa10.11□□□□□ -0.79
SNX1-207ENST00000559401 AKAP11Q9UKA4 1901 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 SLC10A3P09131 477 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 PRDX5P30044 214 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 LBX1P52954 281 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 CACNB3P54284 484 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 HDLBPQ00341 1268 aaKnown RBP10.1□□□□□ -0.79
SNX1-207ENST00000559401 RASGRF1Q13972 1273 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 POLA2Q14181 598 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 RASA3Q14644 834 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 SUPT20HL1Q3ZLR7 823 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 COL13A1Q5TAT6 717 aaPredicted RBP10.1□□□□□ -0.79
SNX1-207ENST00000559401 RASAL3Q86YV0 1011 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 SSH3Q8TE77 659 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 ABCF2Q9UG63 623 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 TSKSQ9UJT2 592 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 DDX19BQ9UMR2 479 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 FZD1Q9UP38 647 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 SUGT1Q9Y2Z0 365 aa10.1□□□□□ -0.79
SNX1-207ENST00000559401 AK9Q5TCS8 1911 aa10.09□□□□□ -0.79
SNX1-207ENST00000559401 MYH2Q9UKX2 1941 aa10.09□□□□□ -0.79
SNX1-207ENST00000559401 PPP1R12BO60237 982 aaPredicted RBP10.09□□□□□ -0.79
SNX1-207ENST00000559401 KIF23Q02241 960 aaPredicted RBP10.09□□□□□ -0.79
SNX1-207ENST00000559401 MKRN3Q13064 507 aaKnown RBP10.09□□□□□ -0.79
SNX1-207ENST00000559401 DIXDC1Q155Q3 683 aa10.09□□□□□ -0.79
SNX1-207ENST00000559401 NBPF12Q5TAG4 269 aaPredicted RBP10.09□□□□□ -0.79
SNX1-207ENST00000559401 CEP85Q6P2H3 762 aa10.09□□□□□ -0.79
SNX1-207ENST00000559401 DZIP1Q86YF9 867 aaKnown RBP10.09□□□□□ -0.79
SNX1-207ENST00000559401 ZGPATQ8N5A5 531 aaKnown RBP10.09□□□□□ -0.79
SNX1-207ENST00000559401 ZDHHC15Q96MV8 337 aa10.09□□□□□ -0.79
SNX1-207ENST00000559401 ZIC5Q96T25 663 aa10.09□□□□□ -0.79
SNX1-207ENST00000559401 BCL11AQ9H165 835 aa10.09□□□□□ -0.79
SNX1-207ENST00000559401 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.09□□□□□ -0.79
SNX1-207ENST00000559401 SSC5DA1L4H1 1573 aa10.09□□□□□ -0.79
SNX1-207ENST00000559401 OTOFQ9HC10 1997 aa10.08□□□□□ -0.8
SNX1-207ENST00000559401 FAM155AB1AL88 458 aaPredicted RBP10.08□□□□□ -0.8
SNX1-207ENST00000559401 HSPA8P11142 646 aaKnown RBP10.08□□□□□ -0.8
SNX1-207ENST00000559401 TNNI3KQ59H18 835 aa10.08□□□□□ -0.8
SNX1-207ENST00000559401 TTC39AQ5SRH9 613 aa10.08□□□□□ -0.8
SNX1-207ENST00000559401 HHIPL2Q6UWX4 724 aa10.08□□□□□ -0.8
SNX1-207ENST00000559401 TNS4Q8IZW8 715 aa10.08□□□□□ -0.8
SNX1-207ENST00000559401 TMEM39BQ9GZU3 492 aa10.08□□□□□ -0.8
SNX1-207ENST00000559401 CHMP4BQ9H444 224 aaKnown RBP10.08□□□□□ -0.8
SNX1-207ENST00000559401 EXOC6BQ9Y2D4 811 aa10.08□□□□□ -0.8
SNX1-207ENST00000559401 FPGT-TNNI3KV9GXZ4 949 aa10.08□□□□□ -0.8
SNX1-207ENST00000559401 SALL1Q9NSC2 1324 aa10.07□□□□□ -0.8
SNX1-207ENST00000559401 APBB1O00213 710 aa10.07□□□□□ -0.8
SNX1-207ENST00000559401 CA12O43570 354 aa10.07□□□□□ -0.8
SNX1-207ENST00000559401 HMMRO75330 724 aa10.07□□□□□ -0.8
SNX1-207ENST00000559401 UQCRFS1P1P0C7P4 283 aa10.07□□□□□ -0.8
SNX1-207ENST00000559401 IREB2P48200 963 aaKnown RBP10.07□□□□□ -0.8
SNX1-207ENST00000559401 CCDC158Q5M9N0 1113 aa10.07□□□□□ -0.8
SNX1-207ENST00000559401 SPTY2D1Q68D10 685 aaPredicted RBP10.07□□□□□ -0.8
SNX1-207ENST00000559401 PI16Q6UXB8 463 aa10.07□□□□□ -0.8
SNX1-207ENST00000559401 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
SNX1-207ENST00000559401 SPATA5Q8NB90 893 aa10.07□□□□□ -0.8
SNX1-207ENST00000559401 DBNDD2Q9BQY9 259 aa10.07□□□□□ -0.8
SNX1-207ENST00000559401 DAGLAQ9Y4D2 1042 aa10.07□□□□□ -0.8
SNX1-207ENST00000559401 MAST2Q6P0Q8 1798 aa10.06□□□□□ -0.8
SNX1-207ENST00000559401 C20orf194Q5TEA3 1177 aa10.06□□□□□ -0.8
SNX1-207ENST00000559401 APOBEC3HQ6NTF7 200 aaKnown RBP10.06□□□□□ -0.8
SNX1-207ENST00000559401 ERC1Q8IUD2 1116 aa10.06□□□□□ -0.8
SNX1-207ENST00000559401 CDAN1Q8IWY9 1227 aa10.06□□□□□ -0.8
SNX1-207ENST00000559401 SLF2Q8IX21 1173 aa10.06□□□□□ -0.8
SNX1-207ENST00000559401 SLC10A4Q96EP9 437 aa10.06□□□□□ -0.8
SNX1-207ENST00000559401 MRIQ9BWK5 157 aa10.06□□□□□ -0.8
SNX1-207ENST00000559401 GPR108Q9NPR9 543 aa10.06□□□□□ -0.8
SNX1-207ENST00000559401 PRDM10Q9NQV6 1147 aa10.06□□□□□ -0.8
SNX1-207ENST00000559401 SNRKQ9NRH2 765 aa10.06□□□□□ -0.8
SNX1-207ENST00000559401 USP40Q9NVE5 1235 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms