RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 WDR66Q8TBY9 1149 aa13.93□□□□□ -0.18
BMP4-204ENST00000558961 SSH3Q8TE77 659 aa13.93□□□□□ -0.18
BMP4-204ENST00000558961 AIDAQ96BJ3 306 aa13.93□□□□□ -0.18
BMP4-204ENST00000558961 DEFB129Q9H1M3 183 aa13.93□□□□□ -0.18
BMP4-204ENST00000558961 PRDM10Q9NQV6 1147 aa13.93□□□□□ -0.18
BMP4-204ENST00000558961 CLRN2A0PK11 232 aa13.92□□□□□ -0.18
BMP4-204ENST00000558961 HSPA8P11142 646 aaKnown RBP13.92□□□□□ -0.18
BMP4-204ENST00000558961 PHKA1P46020 1223 aa13.92□□□□□ -0.18
BMP4-204ENST00000558961 TFCP2Q12800 502 aa13.92□□□□□ -0.18
BMP4-204ENST00000558961 GRM1Q13255 1194 aa13.92□□□□□ -0.18
BMP4-204ENST00000558961 MAP3K11Q16584 847 aa13.92□□□□□ -0.18
BMP4-204ENST00000558961 RASAL3Q86YV0 1011 aa13.92□□□□□ -0.18
BMP4-204ENST00000558961 ZDHHC15Q96MV8 337 aa13.92□□□□□ -0.18
BMP4-204ENST00000558961 AKAP2Q9Y2D5 859 aa13.92□□□□□ -0.18
BMP4-204ENST00000558961 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.92□□□□□ -0.18
BMP4-204ENST00000558961 MYH2Q9UKX2 1941 aa13.92□□□□□ -0.18
BMP4-204ENST00000558961 MAST2Q6P0Q8 1798 aa13.91□□□□□ -0.18
BMP4-204ENST00000558961 A0A1B0GUL7 405 aa13.91□□□□□ -0.18
BMP4-204ENST00000558961 CA12O43570 354 aa13.91□□□□□ -0.18
BMP4-204ENST00000558961 MS4A1P11836 297 aa13.91□□□□□ -0.18
BMP4-204ENST00000558961 ADORA1P30542 326 aa13.91□□□□□ -0.18
BMP4-204ENST00000558961 ZNF157P51786 506 aaPredicted RBP13.91□□□□□ -0.18
BMP4-204ENST00000558961 RBM5P52756 815 aaKnown RBP eCLIP13.91□□□□□ -0.18
BMP4-204ENST00000558961 ATP8B2P98198 1209 aa13.91□□□□□ -0.18
BMP4-204ENST00000558961 TNFAIP1Q13829 316 aa13.91□□□□□ -0.18
BMP4-204ENST00000558961 CCDC102BQ68D86 513 aa13.91□□□□□ -0.18
BMP4-204ENST00000558961 TEKT1Q969V4 418 aa13.91□□□□□ -0.18
BMP4-204ENST00000558961 ZIC5Q96T25 663 aa13.91□□□□□ -0.18
BMP4-204ENST00000558961 GNL3LQ9NVN8 582 aaKnown RBP13.91□□□□□ -0.18
BMP4-204ENST00000558961 ZNF70Q9UC06 446 aaPredicted RBP13.91□□□□□ -0.18
BMP4-204ENST00000558961 DENND2AQ9ULE3 1009 aa13.91□□□□□ -0.18
BMP4-204ENST00000558961 GTF3C3Q9Y5Q9 886 aa13.91□□□□□ -0.18
BMP4-204ENST00000558961 RASGRF1Q13972 1273 aa13.9□□□□□ -0.18
BMP4-204ENST00000558961 MVPQ14764 893 aaKnown RBP13.9□□□□□ -0.18
BMP4-204ENST00000558961 LDLRAD1Q5T700 205 aa13.9□□□□□ -0.18
BMP4-204ENST00000558961 IFFO2Q5TF58 517 aa13.9□□□□□ -0.18
BMP4-204ENST00000558961 HHIPL2Q6UWX4 724 aa13.9□□□□□ -0.18
BMP4-204ENST00000558961 MOB2Q70IA6 237 aa13.9□□□□□ -0.18
BMP4-204ENST00000558961 TDRD3Q9H7E2 651 aaKnown RBP13.9□□□□□ -0.18
BMP4-204ENST00000558961 GPR108Q9NPR9 543 aa13.9□□□□□ -0.18
BMP4-204ENST00000558961 RCAN3Q9UKA8 241 aa13.9□□□□□ -0.18
BMP4-204ENST00000558961 RPAP1Q9BWH6 1393 aaPredicted RBP13.9□□□□□ -0.18
BMP4-204ENST00000558961 UNCXA6NJT0 531 aa13.89□□□□□ -0.19
BMP4-204ENST00000558961 PRDX5P30044 214 aa13.89□□□□□ -0.19
BMP4-204ENST00000558961 TIMM10P62072 90 aa13.89□□□□□ -0.19
BMP4-204ENST00000558961 RASA3Q14644 834 aa13.89□□□□□ -0.19
BMP4-204ENST00000558961 FKBP1CQ5VVH2 108 aa13.89□□□□□ -0.19
BMP4-204ENST00000558961 APOBEC3HQ6NTF7 200 aaKnown RBP13.89□□□□□ -0.19
BMP4-204ENST00000558961 ARMC9Q7Z3E5 817 aa13.89□□□□□ -0.19
BMP4-204ENST00000558961 PANK1Q8TE04 598 aa13.89□□□□□ -0.19
BMP4-204ENST00000558961 XAGE2Q96GT9 111 aa13.89□□□□□ -0.19
BMP4-204ENST00000558961 TEPSINQ96N21 525 aa13.89□□□□□ -0.19
BMP4-204ENST00000558961 BEGAINQ9BUH8 593 aa13.89□□□□□ -0.19
BMP4-204ENST00000558961 C1orf115Q9H7X2 142 aa13.89□□□□□ -0.19
BMP4-204ENST00000558961 VEZTQ9HBM0 779 aa13.89□□□□□ -0.19
BMP4-204ENST00000558961 NOP58Q9Y2X3 529 aaKnown RBP13.89□□□□□ -0.19
BMP4-204ENST00000558961 SUPT16HQ9Y5B9 1047 aaKnown RBP13.89□□□□□ -0.19
BMP4-204ENST00000558961 UBE2Q2LH0YL09 131 aa13.88□□□□□ -0.19
BMP4-204ENST00000558961 ARID4AP29374 1257 aaPredicted RBP13.88□□□□□ -0.19
BMP4-204ENST00000558961 LBX1P52954 281 aa13.88□□□□□ -0.19
BMP4-204ENST00000558961 G3BP1Q13283 466 aaKnown RBP eCLIP13.88□□□□□ -0.19
BMP4-204ENST00000558961 SUPT20HL1Q3ZLR7 823 aa13.88□□□□□ -0.19
BMP4-204ENST00000558961 CEP85Q6P2H3 762 aa13.88□□□□□ -0.19
BMP4-204ENST00000558961 REM2Q8IYK8 340 aaPredicted RBP13.88□□□□□ -0.19
BMP4-204ENST00000558961 SAGE1Q9NXZ1 904 aa13.88□□□□□ -0.19
BMP4-204ENST00000558961 DOCK2Q92608 1830 aa13.87□□□□□ -0.19
BMP4-204ENST00000558961 KIF23Q02241 960 aaPredicted RBP13.87□□□□□ -0.19
BMP4-204ENST00000558961 NBPF12Q5TAG4 269 aaPredicted RBP13.87□□□□□ -0.19
BMP4-204ENST00000558961 FAM83AQ86UY5 434 aa13.87□□□□□ -0.19
BMP4-204ENST00000558961 ZGPATQ8N5A5 531 aaKnown RBP13.87□□□□□ -0.19
BMP4-204ENST00000558961 DAGLAQ9Y4D2 1042 aa13.87□□□□□ -0.19
BMP4-204ENST00000558961 RFX7Q2KHR2 1363 aa13.86□□□□□ -0.19
BMP4-204ENST00000558961 PPP1R12BO60237 982 aaPredicted RBP13.86□□□□□ -0.19
BMP4-204ENST00000558961 LDHBP07195 334 aaKnown RBP13.86□□□□□ -0.19
BMP4-204ENST00000558961 TNNI2P48788 182 aa13.86□□□□□ -0.19
BMP4-204ENST00000558961 TTLL12Q14166 644 aaPredicted RBP13.86□□□□□ -0.19
BMP4-204ENST00000558961 CSRNP1Q96S65 589 aa13.86□□□□□ -0.19
BMP4-204ENST00000558961 DDX19BQ9UMR2 479 aa13.86□□□□□ -0.19
BMP4-204ENST00000558961 ANGEL1Q9UNK9 670 aaKnown RBP13.86□□□□□ -0.19
BMP4-204ENST00000558961 GAKO14976 1311 aa13.86□□□□□ -0.19
BMP4-204ENST00000558961 MYO5AQ9Y4I1 1855 aaKnown RBP13.85□□□□□ -0.19
BMP4-204ENST00000558961 TCP10L2B9ZVM9 353 aa13.85□□□□□ -0.19
BMP4-204ENST00000558961 DIXDC1Q155Q3 683 aa13.85□□□□□ -0.19
BMP4-204ENST00000558961 TNNI3KQ59H18 835 aa13.85□□□□□ -0.19
BMP4-204ENST00000558961 CDAN1Q8IWY9 1227 aa13.85□□□□□ -0.19
BMP4-204ENST00000558961 TMEM39BQ9GZU3 492 aa13.85□□□□□ -0.19
BMP4-204ENST00000558961 ZBTB40Q9NUA8 1239 aa13.85□□□□□ -0.19
BMP4-204ENST00000558961 HMG20BQ9P0W2 317 aa13.85□□□□□ -0.19
BMP4-204ENST00000558961 FZD1Q9UP38 647 aa13.85□□□□□ -0.19
BMP4-204ENST00000558961 FPGT-TNNI3KV9GXZ4 949 aa13.85□□□□□ -0.19
BMP4-204ENST00000558961 USP2O75604 605 aaPredicted RBP13.84□□□□□ -0.19
BMP4-204ENST00000558961 SURF6O75683 361 aaKnown RBP13.84□□□□□ -0.19
BMP4-204ENST00000558961 PRKG1Q13976 671 aa13.84□□□□□ -0.19
BMP4-204ENST00000558961 PDE3AQ14432 1141 aa13.84□□□□□ -0.19
BMP4-204ENST00000558961 TNS4Q8IZW8 715 aa13.84□□□□□ -0.19
BMP4-204ENST00000558961 FAM163AQ96GL9 167 aaPredicted RBP13.84□□□□□ -0.19
BMP4-204ENST00000558961 ZNF512BQ96KM6 892 aaPredicted RBP13.84□□□□□ -0.19
BMP4-204ENST00000558961 NEUROD6Q96NK8 337 aa13.84□□□□□ -0.19
BMP4-204ENST00000558961 TMOD2Q9NZR1 351 aa13.84□□□□□ -0.19
BMP4-204ENST00000558961 FOCADQ5VW36 1801 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms