RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 MAST3O60307 1309 aa26.65■■□□□ 1.86
CRNDE-205ENST00000558952 HDLBPQ00341 1268 aaKnown RBP26.64■■□□□ 1.86
CRNDE-205ENST00000558952 KIF23Q02241 960 aaPredicted RBP26.64■■□□□ 1.86
CRNDE-205ENST00000558952 PRKG1Q13976 671 aa26.64■■□□□ 1.86
CRNDE-205ENST00000558952 RASAL3Q86YV0 1011 aa26.64■■□□□ 1.86
CRNDE-205ENST00000558952 TEKT1Q969V4 418 aa26.64■■□□□ 1.86
CRNDE-205ENST00000558952 SPDYE2Q495Y8 402 aa26.63■■□□□ 1.85
CRNDE-205ENST00000558952 ITPRIPQ8IWB1 547 aa26.63■■□□□ 1.85
CRNDE-205ENST00000558952 TDRD3Q9H7E2 651 aaKnown RBP26.63■■□□□ 1.85
CRNDE-205ENST00000558952 ZNF70Q9UC06 446 aaPredicted RBP26.63■■□□□ 1.85
CRNDE-205ENST00000558952 AKAP2Q9Y2D5 859 aa26.63■■□□□ 1.85
CRNDE-205ENST00000558952 GRIK5Q16478 980 aa26.62■■□□□ 1.85
CRNDE-205ENST00000558952 SUPT20HL1Q3ZLR7 823 aa26.62■■□□□ 1.85
CRNDE-205ENST00000558952 AOX1Q06278 1338 aa26.62■■□□□ 1.85
CRNDE-205ENST00000558952 PPP1R12BO60237 982 aaPredicted RBP26.61■■□□□ 1.85
CRNDE-205ENST00000558952 TSKSQ9UJT2 592 aa26.61■■□□□ 1.85
CRNDE-205ENST00000558952 ANGEL1Q9UNK9 670 aaKnown RBP26.61■■□□□ 1.85
CRNDE-205ENST00000558952 TNNI2P48788 182 aa26.6■■□□□ 1.85
CRNDE-205ENST00000558952 TFCP2Q12800 502 aa26.6■■□□□ 1.85
CRNDE-205ENST00000558952 RASA3Q14644 834 aa26.6■■□□□ 1.85
CRNDE-205ENST00000558952 REM2Q8IYK8 340 aaPredicted RBP26.6■■□□□ 1.85
CRNDE-205ENST00000558952 DENND2AQ9ULE3 1009 aa26.6■■□□□ 1.85
CRNDE-205ENST00000558952 PNMA6EA0A0J9YXQ4 647 aa26.59■■□□□ 1.85
CRNDE-205ENST00000558952 SEMA3EO15041 775 aa26.59■■□□□ 1.85
CRNDE-205ENST00000558952 G3BP1Q13283 466 aaKnown RBP eCLIP26.59■■□□□ 1.85
CRNDE-205ENST00000558952 MRIQ9BWK5 157 aa26.59■■□□□ 1.85
CRNDE-205ENST00000558952 MYH13Q9UKX3 1938 aa26.59■■□□□ 1.85
CRNDE-205ENST00000558952 PHKA1P46020 1223 aa26.58■■□□□ 1.85
CRNDE-205ENST00000558952 TMOD2Q9NZR1 351 aa26.58■■□□□ 1.85
CRNDE-205ENST00000558952 A0A1B0GUL7 405 aa26.57■■□□□ 1.84
CRNDE-205ENST00000558952 TCP10L2B9ZVM9 353 aa26.57■■□□□ 1.84
CRNDE-205ENST00000558952 ADORA1P30542 326 aa26.57■■□□□ 1.84
CRNDE-205ENST00000558952 TIMM10P62072 90 aa26.57■■□□□ 1.84
CRNDE-205ENST00000558952 CCDC102BQ68D86 513 aa26.57■■□□□ 1.84
CRNDE-205ENST00000558952 ZDHHC15Q96MV8 337 aa26.57■■□□□ 1.84
CRNDE-205ENST00000558952 RLBP1P12271 317 aa26.56■■□□□ 1.84
CRNDE-205ENST00000558952 MVPQ14764 893 aaKnown RBP26.56■■□□□ 1.84
CRNDE-205ENST00000558952 NBPF12Q5TAG4 269 aaPredicted RBP26.56■■□□□ 1.84
CRNDE-205ENST00000558952 HHIPL2Q6UWX4 724 aa26.56■■□□□ 1.84
CRNDE-205ENST00000558952 NEUROD6Q96NK8 337 aa26.56■■□□□ 1.84
CRNDE-205ENST00000558952 CSRNP1Q96S65 589 aa26.56■■□□□ 1.84
CRNDE-205ENST00000558952 SAGE1Q9NXZ1 904 aa26.56■■□□□ 1.84
CRNDE-205ENST00000558952 SSC5DA1L4H1 1573 aa26.55■■□□□ 1.84
CRNDE-205ENST00000558952 MS4A1P11836 297 aa26.55■■□□□ 1.84
CRNDE-205ENST00000558952 LDLRAD1Q5T700 205 aa26.55■■□□□ 1.84
CRNDE-205ENST00000558952 XAGE2Q96GT9 111 aa26.55■■□□□ 1.84
CRNDE-205ENST00000558952 FZD1Q9UP38 647 aa26.55■■□□□ 1.84
CRNDE-205ENST00000558952 ZBTB7BO15156 539 aaPredicted RBP26.54■■□□□ 1.84
CRNDE-205ENST00000558952 LDHBP07195 334 aaKnown RBP26.54■■□□□ 1.84
CRNDE-205ENST00000558952 IREB2P48200 963 aaKnown RBP26.54■■□□□ 1.84
CRNDE-205ENST00000558952 MAP3K11Q16584 847 aa26.54■■□□□ 1.84
CRNDE-205ENST00000558952 GORABQ5T7V8 394 aa26.54■■□□□ 1.84
CRNDE-205ENST00000558952 ZGPATQ8N5A5 531 aaKnown RBP26.54■■□□□ 1.84
CRNDE-205ENST00000558952 C1orf115Q9H7X2 142 aa26.54■■□□□ 1.84
CRNDE-205ENST00000558952 SALL1Q9NSC2 1324 aa26.54■■□□□ 1.84
CRNDE-205ENST00000558952 ATP8B2P98198 1209 aa26.53■■□□□ 1.84
CRNDE-205ENST00000558952 OS9Q13438 667 aaPredicted RBP26.53■■□□□ 1.84
CRNDE-205ENST00000558952 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.53■■□□□ 1.84
CRNDE-205ENST00000558952 ZBTB22O15209 634 aa26.52■■□□□ 1.84
CRNDE-205ENST00000558952 TRPA1O75762 1119 aa26.52■■□□□ 1.84
CRNDE-205ENST00000558952 PRDX5P30044 214 aa26.52■■□□□ 1.84
CRNDE-205ENST00000558952 MKRN3Q13064 507 aaKnown RBP26.52■■□□□ 1.84
CRNDE-205ENST00000558952 POLA2Q14181 598 aa26.52■■□□□ 1.84
CRNDE-205ENST00000558952 SLC10A4Q96EP9 437 aa26.52■■□□□ 1.84
CRNDE-205ENST00000558952 RNF186Q9NXI6 227 aa26.52■■□□□ 1.84
CRNDE-205ENST00000558952 UNCXA6NJT0 531 aa26.51■■□□□ 1.83
CRNDE-205ENST00000558952 CAPN15O75808 1086 aa26.51■■□□□ 1.83
CRNDE-205ENST00000558952 CACNB3P54284 484 aa26.51■■□□□ 1.83
CRNDE-205ENST00000558952 APOBEC3HQ6NTF7 200 aaKnown RBP26.51■■□□□ 1.83
CRNDE-205ENST00000558952 PANK1Q8TE04 598 aa26.51■■□□□ 1.83
CRNDE-205ENST00000558952 SSH3Q8TE77 659 aa26.51■■□□□ 1.83
CRNDE-205ENST00000558952 TMEM39BQ9GZU3 492 aa26.51■■□□□ 1.83
CRNDE-205ENST00000558952 PDS5AQ29RF7 1337 aaKnown RBP26.5■■□□□ 1.83
CRNDE-205ENST00000558952 SREBF2Q12772 1141 aa26.5■■□□□ 1.83
CRNDE-205ENST00000558952 RASGRF1Q13972 1273 aa26.5■■□□□ 1.83
CRNDE-205ENST00000558952 DIXDC1Q155Q3 683 aa26.49■■□□□ 1.83
CRNDE-205ENST00000558952 FKBP1CQ5VVH2 108 aa26.49■■□□□ 1.83
CRNDE-205ENST00000558952 ANKRD13AQ8IZ07 590 aa26.49■■□□□ 1.83
CRNDE-205ENST00000558952 TEPSINQ96N21 525 aa26.49■■□□□ 1.83
CRNDE-205ENST00000558952 USP2O75604 605 aaPredicted RBP26.48■■□□□ 1.83
CRNDE-205ENST00000558952 SURF6O75683 361 aaKnown RBP26.48■■□□□ 1.83
CRNDE-205ENST00000558952 SPRYD7Q5W111 196 aa26.48■■□□□ 1.83
CRNDE-205ENST00000558952 SPTY2D1Q68D10 685 aaPredicted RBP26.48■■□□□ 1.83
CRNDE-205ENST00000558952 FAM83AQ86UY5 434 aa26.48■■□□□ 1.83
CRNDE-205ENST00000558952 ABCF2Q9UG63 623 aa26.48■■□□□ 1.83
CRNDE-205ENST00000558952 DAGLAQ9Y4D2 1042 aa26.48■■□□□ 1.83
CRNDE-205ENST00000558952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.48■■□□□ 1.83
CRNDE-205ENST00000558952 DZIP1Q86YF9 867 aaKnown RBP26.47■■□□□ 1.83
CRNDE-205ENST00000558952 HOOK2Q96ED9 719 aa26.47■■□□□ 1.83
CRNDE-205ENST00000558952 CLMNQ96JQ2 1002 aa26.47■■□□□ 1.83
CRNDE-205ENST00000558952 RCAN3Q9UKA8 241 aa26.47■■□□□ 1.83
CRNDE-205ENST00000558952 AKAP11Q9UKA4 1901 aa26.47■■□□□ 1.83
CRNDE-205ENST00000558952 CDAN1Q8IWY9 1227 aa26.46■■□□□ 1.83
CRNDE-205ENST00000558952 SLF2Q8IX21 1173 aa26.46■■□□□ 1.83
CRNDE-205ENST00000558952 ZBTB48P10074 688 aaPredicted RBP26.45■■□□□ 1.82
CRNDE-205ENST00000558952 TM4SF4P48230 202 aa26.45■■□□□ 1.82
CRNDE-205ENST00000558952 WNK4Q96J92 1243 aa26.45■■□□□ 1.82
CRNDE-205ENST00000558952 GPR108Q9NPR9 543 aa26.45■■□□□ 1.82
CRNDE-205ENST00000558952 UQCRFS1P1P0C7P4 283 aa26.44■■□□□ 1.82
CRNDE-205ENST00000558952 MANSC4A6NHS7 340 aaPredicted RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms