RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 CST9Q5W186 159 aa14.98□□□□□ -0.01
TPM1-216ENST00000558910 CDC37L1Q7L3B6 337 aa14.98□□□□□ -0.01
TPM1-216ENST00000558910 ITPRIPQ8IWB1 547 aa14.98□□□□□ -0.01
TPM1-216ENST00000558910 OGFOD1Q8N543 542 aa14.98□□□□□ -0.01
TPM1-216ENST00000558910 ARHGAP45Q92619 1136 aa14.98□□□□□ -0.01
TPM1-216ENST00000558910 RFX5P48382 616 aaPredicted RBP14.97□□□□□ -0.01
TPM1-216ENST00000558910 RBM5P52756 815 aaKnown RBP eCLIP14.97□□□□□ -0.01
TPM1-216ENST00000558910 PTPN12Q05209 780 aaKnown RBP14.97□□□□□ -0.01
TPM1-216ENST00000558910 UBE4AQ14139 1066 aa14.97□□□□□ -0.01
TPM1-216ENST00000558910 DEFB115Q30KQ5 88 aa14.97□□□□□ -0.01
TPM1-216ENST00000558910 INTS3Q68E01 1043 aaKnown RBP14.97□□□□□ -0.01
TPM1-216ENST00000558910 CYP4F22Q6NT55 531 aa14.97□□□□□ -0.01
TPM1-216ENST00000558910 CERS5Q8N5B7 392 aa14.97□□□□□ -0.01
TPM1-216ENST00000558910 MARVELD3Q96A59 401 aa14.97□□□□□ -0.01
TPM1-216ENST00000558910 GMLQ99445 158 aa14.97□□□□□ -0.01
TPM1-216ENST00000558910 PCDHAC2Q9Y5I4 1007 aa14.97□□□□□ -0.01
TPM1-216ENST00000558910 IRS2Q9Y4H2 1338 aa14.96□□□□□ -0.01
TPM1-216ENST00000558910 EYA2O00167 538 aa14.96□□□□□ -0.01
TPM1-216ENST00000558910 SRGAP3O43295 1099 aa14.96□□□□□ -0.01
TPM1-216ENST00000558910 GNAI3P08754 354 aa14.96□□□□□ -0.01
TPM1-216ENST00000558910 BCAMP50895 628 aa14.96□□□□□ -0.01
TPM1-216ENST00000558910 SULF1Q8IWU6 871 aa14.96□□□□□ -0.01
TPM1-216ENST00000558910 ZC3H15Q8WU90 426 aaKnown RBP14.96□□□□□ -0.01
TPM1-216ENST00000558910 FAM84BQ96KN1 310 aaPredicted RBP14.96□□□□□ -0.01
TPM1-216ENST00000558910 HDAC9Q9UKV0 1011 aa14.96□□□□□ -0.01
TPM1-216ENST00000558910 PDE8BO95263 885 aa14.95□□□□□ -0.02
TPM1-216ENST00000558910 ZNF280AP59817 542 aaPredicted RBP14.95□□□□□ -0.02
TPM1-216ENST00000558910 PANK1Q8TE04 598 aa14.95□□□□□ -0.02
TPM1-216ENST00000558910 CNTNAP1P78357 1384 aa14.95□□□□□ -0.02
TPM1-216ENST00000558910 GNAI2P04899 355 aa14.94□□□□□ -0.02
TPM1-216ENST00000558910 HSPA1AP0DMV8 641 aaKnown RBP14.94□□□□□ -0.02
TPM1-216ENST00000558910 HSPA1BP0DMV9 641 aaKnown RBP14.94□□□□□ -0.02
TPM1-216ENST00000558910 RLBP1P12271 317 aa14.94□□□□□ -0.02
TPM1-216ENST00000558910 IL1R1P14778 569 aa14.94□□□□□ -0.02
TPM1-216ENST00000558910 PRKG1Q13976 671 aa14.94□□□□□ -0.02
TPM1-216ENST00000558910 CAVIN4Q5BKX8 364 aa14.94□□□□□ -0.02
TPM1-216ENST00000558910 ATG9AQ7Z3C6 839 aa14.94□□□□□ -0.02
TPM1-216ENST00000558910 DZIP1LQ8IYY4 767 aaKnown RBP14.94□□□□□ -0.02
TPM1-216ENST00000558910 BCL11AQ9H165 835 aa14.94□□□□□ -0.02
TPM1-216ENST00000558910 PGAP2Q9UHJ9 254 aa14.94□□□□□ -0.02
TPM1-216ENST00000558910 MYO3BQ8WXR4 1341 aa14.93□□□□□ -0.02
TPM1-216ENST00000558910 CLRN2A0PK11 232 aa14.93□□□□□ -0.02
TPM1-216ENST00000558910 C2orf72A6NCS6 295 aa14.93□□□□□ -0.02
TPM1-216ENST00000558910 AOC2O75106 756 aa14.93□□□□□ -0.02
TPM1-216ENST00000558910 IFIT1P09914 478 aaKnown RBP14.93□□□□□ -0.02
TPM1-216ENST00000558910 SLC5A1P13866 664 aa14.93□□□□□ -0.02
TPM1-216ENST00000558910 PUM3Q15397 648 aaKnown RBP14.93□□□□□ -0.02
TPM1-216ENST00000558910 DLGAP5Q15398 846 aa14.93□□□□□ -0.02
TPM1-216ENST00000558910 MFSD14BQ5SR56 506 aa14.93□□□□□ -0.02
TPM1-216ENST00000558910 C15orf52Q6ZUT6 534 aaKnown RBP14.93□□□□□ -0.02
TPM1-216ENST00000558910 VGLL2Q8N8G2 317 aa14.93□□□□□ -0.02
TPM1-216ENST00000558910 CDCA5Q96FF9 252 aa14.93□□□□□ -0.02
TPM1-216ENST00000558910 CEP126Q9P2H0 1117 aa14.93□□□□□ -0.02
TPM1-216ENST00000558910 HDAC5Q9UQL6 1122 aa14.93□□□□□ -0.02
TPM1-216ENST00000558910 A0A1B0GUL6 1792 aa14.93□□□□□ -0.02
TPM1-216ENST00000558910 WNT10BO00744 389 aa14.92□□□□□ -0.02
TPM1-216ENST00000558910 HUNKP57058 714 aa14.92□□□□□ -0.02
TPM1-216ENST00000558910 TTLL12Q14166 644 aaPredicted RBP14.92□□□□□ -0.02
TPM1-216ENST00000558910 GRIK5Q16478 980 aa14.92□□□□□ -0.02
TPM1-216ENST00000558910 ATP2B3Q16720 1220 aa14.92□□□□□ -0.02
TPM1-216ENST00000558910 CFAP100Q494V2 611 aa14.92□□□□□ -0.02
TPM1-216ENST00000558910 TDRD7Q8NHU6 1098 aaKnown RBP14.92□□□□□ -0.02
TPM1-216ENST00000558910 CAPNS2Q96L46 248 aa14.92□□□□□ -0.02
TPM1-216ENST00000558910 VEZTQ9HBM0 779 aa14.92□□□□□ -0.02
TPM1-216ENST00000558910 TTF2Q9UNY4 1162 aaKnown RBP14.92□□□□□ -0.02
TPM1-216ENST00000558910 POLR2AP24928 1970 aaKnown RBP14.92□□□□□ -0.02
TPM1-216ENST00000558910 WDR33Q9C0J8 1336 aaKnown RBP14.92□□□□□ -0.02
TPM1-216ENST00000558910 PNMA6EA0A0J9YXQ4 647 aa14.91□□□□□ -0.02
TPM1-216ENST00000558910 ADORA1P30542 326 aa14.91□□□□□ -0.02
TPM1-216ENST00000558910 TFCP2Q12800 502 aa14.91□□□□□ -0.02
TPM1-216ENST00000558910 MOB2Q70IA6 237 aa14.91□□□□□ -0.02
TPM1-216ENST00000558910 FBXO33Q7Z6M2 555 aa14.91□□□□□ -0.02
TPM1-216ENST00000558910 ZNF710Q8N1W2 664 aa14.91□□□□□ -0.02
TPM1-216ENST00000558910 JMYQ8N9B5 988 aa14.91□□□□□ -0.02
TPM1-216ENST00000558910 GBA2Q9HCG7 927 aaPredicted RBP14.91□□□□□ -0.02
TPM1-216ENST00000558910 TLL2Q9Y6L7 1015 aa14.91□□□□□ -0.02
TPM1-216ENST00000558910 AOX1Q06278 1338 aa14.91□□□□□ -0.02
TPM1-216ENST00000558910 RASSF10A6NK89 507 aa14.9□□□□□ -0.02
TPM1-216ENST00000558910 IL15P40933 162 aaPredicted RBP14.9□□□□□ -0.02
TPM1-216ENST00000558910 TIMM10P62072 90 aa14.9□□□□□ -0.02
TPM1-216ENST00000558910 OS9Q13438 667 aaPredicted RBP14.9□□□□□ -0.02
TPM1-216ENST00000558910 C2orf69Q8N8R5 385 aa14.9□□□□□ -0.02
TPM1-216ENST00000558910 LPIN2Q92539 896 aa14.9□□□□□ -0.02
TPM1-216ENST00000558910 NEUROD6Q96NK8 337 aa14.9□□□□□ -0.02
TPM1-216ENST00000558910 FZD1Q9UP38 647 aa14.9□□□□□ -0.02
TPM1-216ENST00000558910 FGFR2P21802 821 aa14.89□□□□□ -0.03
TPM1-216ENST00000558910 SAPCD2Q86UD0 394 aa14.89□□□□□ -0.03
TPM1-216ENST00000558910 RCAN3Q9UKA8 241 aa14.89□□□□□ -0.03
TPM1-216ENST00000558910 PSME4Q14997 1843 aa14.89□□□□□ -0.03
TPM1-216ENST00000558910 GTPBP6O43824 516 aaPredicted RBP14.88□□□□□ -0.03
TPM1-216ENST00000558910 PHKA1P46020 1223 aa14.88□□□□□ -0.03
TPM1-216ENST00000558910 G3BP1Q13283 466 aaKnown RBP eCLIP14.88□□□□□ -0.03
TPM1-216ENST00000558910 AIDAQ96BJ3 306 aa14.88□□□□□ -0.03
TPM1-216ENST00000558910 PRMT6Q96LA8 375 aaPredicted RBP14.88□□□□□ -0.03
TPM1-216ENST00000558910 COPRSQ9NQ92 184 aa14.88□□□□□ -0.03
TPM1-216ENST00000558910 RYDENQ9NUL5 291 aaKnown RBP14.88□□□□□ -0.03
TPM1-216ENST00000558910 TSKSQ9UJT2 592 aa14.88□□□□□ -0.03
TPM1-216ENST00000558910 COG6Q9Y2V7 657 aa14.88□□□□□ -0.03
TPM1-216ENST00000558910 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.88□□□□□ -0.03
TPM1-216ENST00000558910 TRPM7Q96QT4 1865 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms