RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 RBM46Q8TBY0 533 aaKnown RBP9.26□□□□□ -0.93
LRRC28-211ENST00000558890 EAF2Q96CJ1 260 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-211ENST00000558890 MXD3Q9BW11 206 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 GNL3LQ9NVN8 582 aaKnown RBP9.26□□□□□ -0.93
LRRC28-211ENST00000558890 FAM205AQ6ZU69 1335 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 SALL1Q9NSC2 1324 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 MYH7P12883 1935 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 AK9Q5TCS8 1911 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 USP17L3A6NCW0 530 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 USP17L4A6NCW7 530 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 DDX11L8A8MPP1 907 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 GLRX3O76003 335 aaKnown RBP9.25□□□□□ -0.93
LRRC28-211ENST00000558890 ITGBL1O95965 494 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-211ENST00000558890 ATP5JP18859 108 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 MX1P20591 662 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 PTMSP20962 102 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 MCCP23508 829 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 RPS12P25398 132 aaKnown RBP9.25□□□□□ -0.93
LRRC28-211ENST00000558890 PDE1AP54750 535 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 TIMM10P62072 90 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 RSBN1LQ6PCB5 846 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-211ENST00000558890 USP17L1Q7RTZ2 530 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 AACSQ86V21 672 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 C16orf71Q8IYS4 520 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-211ENST00000558890 AGBL3Q8NEM8 1001 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 OTUD7AQ8TE49 926 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-211ENST00000558890 ZBED3Q96IU2 234 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-211ENST00000558890 ECHDC1Q9NTX5 307 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 CNOT7Q9UIV1 285 aaKnown RBP9.25□□□□□ -0.93
LRRC28-211ENST00000558890 HACL1Q9UJ83 578 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 DBNLQ9UJU6 430 aaKnown RBP9.25□□□□□ -0.93
LRRC28-211ENST00000558890 SUGT1Q9Y2Z0 365 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 GJA3Q9Y6H8 435 aa9.25□□□□□ -0.93
LRRC28-211ENST00000558890 ADORA1P30542 326 aa9.24□□□□□ -0.93
LRRC28-211ENST00000558890 HIBADHP31937 336 aaKnown RBP9.24□□□□□ -0.93
LRRC28-211ENST00000558890 EPHX2P34913 555 aa9.24□□□□□ -0.93
LRRC28-211ENST00000558890 C1QTNF8P60827 252 aa9.24□□□□□ -0.93
LRRC28-211ENST00000558890 GRIK5Q16478 980 aa9.24□□□□□ -0.93
LRRC28-211ENST00000558890 TTLL5Q6EMB2 1281 aa9.24□□□□□ -0.93
LRRC28-211ENST00000558890 ZGPATQ8N5A5 531 aaKnown RBP9.24□□□□□ -0.93
LRRC28-211ENST00000558890 TRPM4Q8TD43 1214 aa9.24□□□□□ -0.93
LRRC28-211ENST00000558890 TBC1D22AQ8WUA7 517 aa9.24□□□□□ -0.93
LRRC28-211ENST00000558890 XAGE2Q96GT9 111 aa9.24□□□□□ -0.93
LRRC28-211ENST00000558890 GBP4Q96PP9 640 aa9.24□□□□□ -0.93
LRRC28-211ENST00000558890 DENND2AQ9ULE3 1009 aa9.24□□□□□ -0.93
LRRC28-211ENST00000558890 MYO3BQ8WXR4 1341 aa9.24□□□□□ -0.93
LRRC28-211ENST00000558890 SCN4AP35499 1836 aa9.24□□□□□ -0.93
LRRC28-211ENST00000558890 ADAMTSL1Q8N6G6 1762 aa9.23□□□□□ -0.93
LRRC28-211ENST00000558890 IQCA1LA6NCM1 817 aa9.23□□□□□ -0.93
LRRC28-211ENST00000558890 ST18O60284 1047 aa9.23□□□□□ -0.93
LRRC28-211ENST00000558890 MCM4P33991 863 aa9.23□□□□□ -0.93
LRRC28-211ENST00000558890 GTF2IP78347 998 aa9.23□□□□□ -0.93
LRRC28-211ENST00000558890 TTF1Q15361 905 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-211ENST00000558890 LRRFIP1Q32MZ4 808 aaKnown RBP9.23□□□□□ -0.93
LRRC28-211ENST00000558890 CCDC102BQ68D86 513 aa9.23□□□□□ -0.93
LRRC28-211ENST00000558890 USP50Q70EL3 339 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-211ENST00000558890 MICALL2Q8IY33 904 aa9.23□□□□□ -0.93
LRRC28-211ENST00000558890 KIF2CQ99661 725 aa9.23□□□□□ -0.93
LRRC28-211ENST00000558890 IL1RAPL2Q9NP60 686 aa9.23□□□□□ -0.93
LRRC28-211ENST00000558890 PCNTO95613 3336 aa9.23□□□□□ -0.93
LRRC28-211ENST00000558890 PHKA1P46020 1223 aa9.22□□□□□ -0.93
LRRC28-211ENST00000558890 FSTL1Q12841 308 aa9.22□□□□□ -0.93
LRRC28-211ENST00000558890 GORABQ5T7V8 394 aa9.22□□□□□ -0.93
LRRC28-211ENST00000558890 SAMD7Q7Z3H4 446 aa9.22□□□□□ -0.93
LRRC28-211ENST00000558890 PNMA8AQ86V59 439 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-211ENST00000558890 WDR66Q8TBY9 1149 aa9.22□□□□□ -0.93
LRRC28-211ENST00000558890 PI4K2BQ8TCG2 481 aa9.22□□□□□ -0.93
LRRC28-211ENST00000558890 HAUS7Q99871 368 aa9.22□□□□□ -0.93
LRRC28-211ENST00000558890 DBNDD2Q9BQY9 259 aa9.22□□□□□ -0.93
LRRC28-211ENST00000558890 USP26Q9BXU7 913 aa9.22□□□□□ -0.93
LRRC28-211ENST00000558890 ADARB2Q9NS39 739 aaKnown RBP9.22□□□□□ -0.93
LRRC28-211ENST00000558890 PASKQ96RG2 1323 aa9.22□□□□□ -0.93
LRRC28-211ENST00000558890 TRIM6-TRIM34B2RNG4 842 aa9.21□□□□□ -0.94
LRRC28-211ENST00000558890 USP17L8P0C7I0 530 aa9.21□□□□□ -0.94
LRRC28-211ENST00000558890 TTC39AQ5SRH9 613 aa9.21□□□□□ -0.94
LRRC28-211ENST00000558890 L1TD1Q5T7N2 865 aaKnown RBP9.21□□□□□ -0.94
LRRC28-211ENST00000558890 CHADLQ6NUI6 762 aa9.21□□□□□ -0.94
LRRC28-211ENST00000558890 LDHDQ86WU2 507 aa9.21□□□□□ -0.94
LRRC28-211ENST00000558890 VPS37DQ86XT2 251 aa9.21□□□□□ -0.94
LRRC28-211ENST00000558890 CERS3Q8IU89 383 aa9.21□□□□□ -0.94
LRRC28-211ENST00000558890 MTMR14Q8NCE2 650 aa9.21□□□□□ -0.94
LRRC28-211ENST00000558890 ZC3H15Q8WU90 426 aaKnown RBP9.21□□□□□ -0.94
LRRC28-211ENST00000558890 NEUROD6Q96NK8 337 aa9.21□□□□□ -0.94
LRRC28-211ENST00000558890 MRIQ9BWK5 157 aa9.21□□□□□ -0.94
LRRC28-211ENST00000558890 IQSEC3Q9UPP2 1182 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-211ENST00000558890 MAST3O60307 1309 aa9.21□□□□□ -0.94
LRRC28-211ENST00000558890 ASTN2O75129 1339 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-211ENST00000558890 ECM29Q5VYK3 1845 aa9.21□□□□□ -0.94
LRRC28-211ENST00000558890 COL1A1P02452 1464 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-211ENST00000558890 GOLGA6L22H0YM25 854 aa9.2□□□□□ -0.94
LRRC28-211ENST00000558890 H7C1D1 291 aa9.2□□□□□ -0.94
LRRC28-211ENST00000558890 DDIT3P35638 169 aa9.2□□□□□ -0.94
LRRC28-211ENST00000558890 FMR1Q06787 632 aaKnown RBP eCLIP9.2□□□□□ -0.94
LRRC28-211ENST00000558890 SPTY2D1Q68D10 685 aaPredicted RBP9.2□□□□□ -0.94
LRRC28-211ENST00000558890 SPATA5Q8NB90 893 aa9.2□□□□□ -0.94
LRRC28-211ENST00000558890 SMC1BQ8NDV3 1235 aa9.2□□□□□ -0.94
LRRC28-211ENST00000558890 IL27Q8NEV9 243 aa9.2□□□□□ -0.94
LRRC28-211ENST00000558890 ZNF384Q8TF68 577 aa9.2□□□□□ -0.94
LRRC28-211ENST00000558890 EVI5LQ96CN4 794 aa9.2□□□□□ -0.94
LRRC28-211ENST00000558890 ESYT1Q9BSJ8 1104 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms