RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 CCL15-CCL14A0A0B4J2E2 113 aa20.2■□□□□ 0.82
CDC42BPB-203ENST00000558867 EN2P19622 333 aaPredicted RBP20.2■□□□□ 0.82
CDC42BPB-203ENST00000558867 CCL15Q16663 113 aa20.2■□□□□ 0.82
CDC42BPB-203ENST00000558867 SLC4A8Q2Y0W8 1093 aa20.2■□□□□ 0.82
CDC42BPB-203ENST00000558867 VPS37DQ86XT2 251 aa20.2■□□□□ 0.82
CDC42BPB-203ENST00000558867 HOOK2Q96ED9 719 aa20.2■□□□□ 0.82
CDC42BPB-203ENST00000558867 TDRD3Q9H7E2 651 aaKnown RBP20.2■□□□□ 0.82
CDC42BPB-203ENST00000558867 RBBP6Q7Z6E9 1792 aaKnown RBP20.2■□□□□ 0.82
CDC42BPB-203ENST00000558867 GRM8O00222 908 aa20.19■□□□□ 0.82
CDC42BPB-203ENST00000558867 BEND3Q5T5X7 828 aa20.19■□□□□ 0.82
CDC42BPB-203ENST00000558867 DZIP1LQ8IYY4 767 aaKnown RBP20.19■□□□□ 0.82
CDC42BPB-203ENST00000558867 TDRD7Q8NHU6 1098 aaKnown RBP20.19■□□□□ 0.82
CDC42BPB-203ENST00000558867 HTTP42858 3142 aa20.19■□□□□ 0.82
CDC42BPB-203ENST00000558867 TCP10L2B9ZVM9 353 aa20.18■□□□□ 0.82
CDC42BPB-203ENST00000558867 VAMP4O75379 141 aa20.18■□□□□ 0.82
CDC42BPB-203ENST00000558867 ZNF594Q96JF6 807 aaPredicted RBP20.18■□□□□ 0.82
CDC42BPB-203ENST00000558867 ZNF333Q96JL9 665 aa20.18■□□□□ 0.82
CDC42BPB-203ENST00000558867 MS4A4AQ96JQ5 239 aa20.18■□□□□ 0.82
CDC42BPB-203ENST00000558867 FANCIQ9NVI1 1328 aa20.18■□□□□ 0.82
CDC42BPB-203ENST00000558867 FRAT2O75474 233 aaPredicted RBP20.17■□□□□ 0.82
CDC42BPB-203ENST00000558867 CRKP46108 304 aa20.17■□□□□ 0.82
CDC42BPB-203ENST00000558867 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.17■□□□□ 0.82
CDC42BPB-203ENST00000558867 TBC1D22AQ8WUA7 517 aa20.17■□□□□ 0.82
CDC42BPB-203ENST00000558867 TMOD2Q9NZR1 351 aa20.17■□□□□ 0.82
CDC42BPB-203ENST00000558867 F6X3S4 739 aa20.16■□□□□ 0.82
CDC42BPB-203ENST00000558867 GNRH1P01148 92 aa20.16■□□□□ 0.82
CDC42BPB-203ENST00000558867 CETPP11597 493 aa20.16■□□□□ 0.82
CDC42BPB-203ENST00000558867 GYG1P46976 350 aa20.16■□□□□ 0.82
CDC42BPB-203ENST00000558867 HDLBPQ00341 1268 aaKnown RBP20.16■□□□□ 0.82
CDC42BPB-203ENST00000558867 VGLL4Q14135 290 aa20.16■□□□□ 0.82
CDC42BPB-203ENST00000558867 CAVIN4Q5BKX8 364 aa20.16■□□□□ 0.82
CDC42BPB-203ENST00000558867 WDR63Q8IWG1 891 aa20.16■□□□□ 0.82
CDC42BPB-203ENST00000558867 BRI3BPQ8WY22 251 aa20.16■□□□□ 0.82
CDC42BPB-203ENST00000558867 OTUD5Q96G74 571 aa20.16■□□□□ 0.82
CDC42BPB-203ENST00000558867 ZCCHC17Q9NP64 241 aaKnown RBP20.16■□□□□ 0.82
CDC42BPB-203ENST00000558867 CENPFP49454 3210 aa20.15■□□□□ 0.82
CDC42BPB-203ENST00000558867 ALDH1L1O75891 902 aa20.15■□□□□ 0.82
CDC42BPB-203ENST00000558867 PRMT2P55345 433 aa20.15■□□□□ 0.82
CDC42BPB-203ENST00000558867 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.15■□□□□ 0.82
CDC42BPB-203ENST00000558867 FAM84BQ96KN1 310 aaPredicted RBP20.15■□□□□ 0.82
CDC42BPB-203ENST00000558867 TEPSINQ96N21 525 aa20.15■□□□□ 0.82
CDC42BPB-203ENST00000558867 TMEM39BQ9GZU3 492 aa20.15■□□□□ 0.82
CDC42BPB-203ENST00000558867 PTCH2Q9Y6C5 1203 aa20.15■□□□□ 0.82
CDC42BPB-203ENST00000558867 AOX1Q06278 1338 aa20.15■□□□□ 0.82
CDC42BPB-203ENST00000558867 MROH5Q6ZUA9 1318 aa20.15■□□□□ 0.82
CDC42BPB-203ENST00000558867 A0A1B0GUL6 1792 aa20.15■□□□□ 0.82
CDC42BPB-203ENST00000558867 MKI67P46013 3256 aaKnown RBP20.14■□□□□ 0.82
CDC42BPB-203ENST00000558867 EXOSC9Q06265 439 aaKnown RBP20.14■□□□□ 0.81
CDC42BPB-203ENST00000558867 ERO1BQ86YB8 467 aa20.14■□□□□ 0.81
CDC42BPB-203ENST00000558867 TEKT1Q969V4 418 aa20.14■□□□□ 0.81
CDC42BPB-203ENST00000558867 GTF3C3Q9Y5Q9 886 aa20.14■□□□□ 0.81
CDC42BPB-203ENST00000558867 SPDYE5A6NIY4 337 aa20.13■□□□□ 0.81
CDC42BPB-203ENST00000558867 TLR2O60603 784 aa20.13■□□□□ 0.81
CDC42BPB-203ENST00000558867 SNAPC2Q13487 334 aa20.13■□□□□ 0.81
CDC42BPB-203ENST00000558867 EPHA10Q5JZY3 1008 aa20.13■□□□□ 0.81
CDC42BPB-203ENST00000558867 SRCIN1Q9C0H9 1055 aa20.13■□□□□ 0.81
CDC42BPB-203ENST00000558867 MAST3O60307 1309 aa20.12■□□□□ 0.81
CDC42BPB-203ENST00000558867 DCAF15Q66K64 600 aa20.12■□□□□ 0.81
CDC42BPB-203ENST00000558867 SLC4A10Q6U841 1118 aa20.12■□□□□ 0.81
CDC42BPB-203ENST00000558867 FAM43AQ8N2R8 423 aa20.12■□□□□ 0.81
CDC42BPB-203ENST00000558867 CNKSR2Q8WXI2 1034 aa20.12■□□□□ 0.81
CDC42BPB-203ENST00000558867 OTOFQ9HC10 1997 aa20.12■□□□□ 0.81
CDC42BPB-203ENST00000558867 CHAF1AQ13111 956 aaPredicted RBP20.11■□□□□ 0.81
CDC42BPB-203ENST00000558867 FAM83AQ86UY5 434 aa20.11■□□□□ 0.81
CDC42BPB-203ENST00000558867 WRNIP1Q96S55 665 aa20.11■□□□□ 0.81
CDC42BPB-203ENST00000558867 MRIQ9BWK5 157 aa20.11■□□□□ 0.81
CDC42BPB-203ENST00000558867 HOXD10P28358 340 aa20.1■□□□□ 0.81
CDC42BPB-203ENST00000558867 LACTBP83111 547 aaPredicted RBP20.1■□□□□ 0.81
CDC42BPB-203ENST00000558867 FKBP1CQ5VVH2 108 aa20.1■□□□□ 0.81
CDC42BPB-203ENST00000558867 SUGT1Q9Y2Z0 365 aa20.1■□□□□ 0.81
CDC42BPB-203ENST00000558867 FXR1P51114 621 aaKnown RBP eCLIP20.09■□□□□ 0.81
CDC42BPB-203ENST00000558867 PPIL2Q13356 520 aa20.09■□□□□ 0.81
CDC42BPB-203ENST00000558867 METTL24Q5JXM2 366 aa20.09■□□□□ 0.81
CDC42BPB-203ENST00000558867 FBXO33Q7Z6M2 555 aa20.09■□□□□ 0.81
CDC42BPB-203ENST00000558867 CDAN1Q8IWY9 1227 aa20.09■□□□□ 0.81
CDC42BPB-203ENST00000558867 SALL2Q9Y467 1007 aaPredicted RBP20.09■□□□□ 0.81
CDC42BPB-203ENST00000558867 RIPOR2Q9Y4F9 1068 aa20.09■□□□□ 0.81
CDC42BPB-203ENST00000558867 ARAP2Q8WZ64 1704 aa20.08■□□□□ 0.81
CDC42BPB-203ENST00000558867 MYCP01106 439 aaPredicted RBP20.08■□□□□ 0.81
CDC42BPB-203ENST00000558867 NKX2-3Q8TAU0 364 aa20.08■□□□□ 0.81
CDC42BPB-203ENST00000558867 ZDHHC15Q96MV8 337 aa20.08■□□□□ 0.81
CDC42BPB-203ENST00000558867 PUS3Q9BZE2 481 aaKnown RBP20.08■□□□□ 0.81
CDC42BPB-203ENST00000558867 COLQQ9Y215 455 aaPredicted RBP20.08■□□□□ 0.81
CDC42BPB-203ENST00000558867 BTBD19C9JJ37 291 aa20.07■□□□□ 0.8
CDC42BPB-203ENST00000558867 CAP1Q01518 475 aa20.07■□□□□ 0.8
CDC42BPB-203ENST00000558867 PPATQ06203 517 aa20.07■□□□□ 0.8
CDC42BPB-203ENST00000558867 SH3TC2Q8TF17 1288 aa20.07■□□□□ 0.8
CDC42BPB-203ENST00000558867 ZNF341Q9BYN7 854 aa20.07■□□□□ 0.8
CDC42BPB-203ENST00000558867 IQSEC3Q9UPP2 1182 aaPredicted RBP20.07■□□□□ 0.8
CDC42BPB-203ENST00000558867 SNCAIPQ9Y6H5 919 aa20.07■□□□□ 0.8
CDC42BPB-203ENST00000558867 IRF6O14896 467 aa20.06■□□□□ 0.8
CDC42BPB-203ENST00000558867 ZKSCAN4Q969J2 545 aaPredicted RBP20.06■□□□□ 0.8
CDC42BPB-203ENST00000558867 SUCLG2Q96I99 432 aa20.06■□□□□ 0.8
CDC42BPB-203ENST00000558867 PDE8BO95263 885 aa20.05■□□□□ 0.8
CDC42BPB-203ENST00000558867 CACNB3P54284 484 aa20.05■□□□□ 0.8
CDC42BPB-203ENST00000558867 CEP290O15078 2479 aa20.04■□□□□ 0.8
CDC42BPB-203ENST00000558867 IFIT1P09914 478 aaKnown RBP20.04■□□□□ 0.8
CDC42BPB-203ENST00000558867 HHIPL2Q6UWX4 724 aa20.04■□□□□ 0.8
CDC42BPB-203ENST00000558867 ANKRD23Q86SG2 305 aa20.04■□□□□ 0.8
CDC42BPB-203ENST00000558867 RAET1EQ8TD07 263 aa20.04■□□□□ 0.8
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