RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, human

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPM1-208	ENST00000558768	GLRX3	O76003	335 aa	Known RBP	10.89	□□□□□ -0.67
TRPM1-208	ENST00000558768	RPSA	P08865	295 aa	Known RBP	10.89	□□□□□ -0.67
TRPM1-208	ENST00000558768	DYNC1I2	Q13409	638 aa	Known RBP	10.89	□□□□□ -0.67
TRPM1-208	ENST00000558768	IFT81	Q8WYA0	676 aa		10.89	□□□□□ -0.67
TRPM1-208	ENST00000558768	SPAG5	Q96R06	1193 aa		10.89	□□□□□ -0.67
TRPM1-208	ENST00000558768	YY1AP1	Q9H869	796 aa		10.89	□□□□□ -0.67
TRPM1-208	ENST00000558768	GRIN2A	Q12879	1464 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	CHUK	O15111	745 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	ZBTB22	O15209	634 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	GKAP1	Q5VSY0	366 aa	Predicted RBP	10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	FYB2	Q5VWT5	728 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	KIF1BP	Q96EK5	621 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768		Q9H521	79 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	PAIP2B	Q9ULR5	123 aa	Known RBP	10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	SCIN	Q9Y6U3	715 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	MAP3K21	Q5TCX8	1036 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	CCDC62	Q6P9F0	684 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	LOC102724159	A0A0B4J2E5	919 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	TTC36	A6NLP5	189 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	MYO1C	O00159	1063 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	CHMP2A	O43633	222 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	POLE2	P56282	527 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	PWP2	Q15269	919 aa	Known RBP	10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	TSHZ3	Q63HK5	1081 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	HAUS1	Q96CS2	278 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	SLC24A3	Q9HC58	644 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	BCAP29	Q9UHQ4	241 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	RGS12	O14924	1447 aa		10.88	□□□□□ -0.67
TRPM1-208	ENST00000558768	LMBR1	Q8WVP7	490 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	CLSTN2	Q9H4D0	955 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	AKAP2	Q9Y2D5	859 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	SSH2	Q76I76	1423 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	VPS41	P49754	854 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	C1orf141	Q5JVX7	400 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	NAA16	Q6N069	864 aa	Predicted RBP	10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	C8orf58	Q8NAV2	365 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	SIL1	Q9H173	461 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	ADGRL1	O94910	1474 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	RANBP1	P43487	201 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	AOPEP	Q8N6M6	819 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	SCOC	Q9UIL1	159 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	KDM5A	P29375	1690 aa	Known RBP	10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768		E7EVH7	732 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	PSMD7	P51665	324 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	MAP3K7CL	P57077	242 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	AFAP1	Q8N556	730 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	JAKMIP2	Q96AA8	810 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	NACAP1	Q9BZK3	213 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	LZTFL1	Q9NQ48	299 aa		10.87	□□□□□ -0.67
TRPM1-208	ENST00000558768	PTPRT	O14522	1441 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	KARS	Q15046	597 aa	Known RBP	10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	LRRC8A	Q8IWT6	810 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	C14orf93	Q9H972	538 aa	Known RBP	10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	DUOX2	Q9NRD8	1548 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	PCYT1A	P49585	367 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	TRPC3	Q13507	836 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	PDCD2	Q16342	344 aa	Predicted RBP	10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	RBM26	Q5T8P6	1007 aa	Known RBP	10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	FBXO38	Q6PIJ6	1188 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	ARMC9	Q7Z3E5	817 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	TDRD7	Q8NHU6	1098 aa	Known RBP	10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	RABEP2	Q9H5N1	569 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	IMPACT	Q9P2X3	320 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	BICDL2	A1A5D9	508 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	GNGT1	P63211	74 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	FAM71B	Q8TC56	605 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	ANKRD24	Q8TF21	1146 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	NECTIN2	Q92692	538 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	EXOC4	Q96A65	974 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	ZNF518A	Q6AHZ1	1483 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	KIAA0556	O60303	1618 aa		10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	VIRMA	Q69YN4	1812 aa	Known RBP	10.86	□□□□□ -0.67
TRPM1-208	ENST00000558768	RNF40	O75150	1001 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	CLTA	P09496	248 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	CDC25B	P30305	580 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	ZNF131	P52739	623 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	SLC20A2	Q08357	652 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	CETN1	Q12798	172 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	TMED1	Q13445	227 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	CACTIN	Q8WUQ7	758 aa	Known RBP	10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	UTP14A	Q9BVJ6	771 aa	Known RBP	10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	SIRT2	Q8IXJ6	389 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	CAPZA3	Q96KX2	299 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	NAPG	Q99747	312 aa	Predicted RBP	10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	EIF2A	Q9BY44	585 aa	Known RBP	10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	SBNO2	Q9Y2G9	1366 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	ZFX	P17010	805 aa	Predicted RBP	10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	KMT5B	Q4FZB7	885 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	TAOK1	Q7L7X3	1001 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	CCDC42	Q96M95	316 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	GUCA1B	Q9UMX6	200 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	E2F5	Q15329	346 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	TMEM132A	Q24JP5	1023 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	OSBPL3	Q9H4L5	887 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	SPG7	Q9UQ90	795 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	LAMC1	P11047	1609 aa		10.85	□□□□□ -0.67
TRPM1-208	ENST00000558768	SPECC1L-ADORA2A	F8WAN1	911 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms