RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 NOB1Q9ULX3 412 aaKnown RBP14.46□□□□□ -0.09
CASC4-205ENST00000558735 ANGEL1Q9UNK9 670 aaKnown RBP14.46□□□□□ -0.09
CASC4-205ENST00000558735 TTF2Q9UNY4 1162 aaKnown RBP14.46□□□□□ -0.09
CASC4-205ENST00000558735 IQSEC3Q9UPP2 1182 aaPredicted RBP14.46□□□□□ -0.09
CASC4-205ENST00000558735 PTPN22Q9Y2R2 807 aa14.46□□□□□ -0.09
CASC4-205ENST00000558735 IGF2BP3O00425 579 aaKnown RBP eCLIP14.45□□□□□ -0.1
CASC4-205ENST00000558735 MYO1BO43795 1136 aa14.45□□□□□ -0.1
CASC4-205ENST00000558735 CT47B1P0C2W7 299 aaPredicted RBP14.45□□□□□ -0.1
CASC4-205ENST00000558735 BCAMP50895 628 aa14.45□□□□□ -0.1
CASC4-205ENST00000558735 RASA3Q14644 834 aa14.45□□□□□ -0.1
CASC4-205ENST00000558735 NBPF12Q5TAG4 269 aaPredicted RBP14.45□□□□□ -0.1
CASC4-205ENST00000558735 ERO1AQ96HE7 468 aa14.45□□□□□ -0.1
CASC4-205ENST00000558735 WNK4Q96J92 1243 aa14.45□□□□□ -0.1
CASC4-205ENST00000558735 VEZTQ9HBM0 779 aa14.45□□□□□ -0.1
CASC4-205ENST00000558735 SSC5DA1L4H1 1573 aa14.44□□□□□ -0.1
CASC4-205ENST00000558735 TESPA1A2RU30 521 aaPredicted RBP14.44□□□□□ -0.1
CASC4-205ENST00000558735 PPP1R12BO60237 982 aaPredicted RBP14.44□□□□□ -0.1
CASC4-205ENST00000558735 USP2O75604 605 aaPredicted RBP14.44□□□□□ -0.1
CASC4-205ENST00000558735 FGFR2P21802 821 aa14.44□□□□□ -0.1
CASC4-205ENST00000558735 FXR1P51114 621 aaKnown RBP eCLIP14.44□□□□□ -0.1
CASC4-205ENST00000558735 CAVIN4Q5BKX8 364 aa14.44□□□□□ -0.1
CASC4-205ENST00000558735 VPS37DQ86XT2 251 aa14.44□□□□□ -0.1
CASC4-205ENST00000558735 DZIP1LQ8IYY4 767 aaKnown RBP14.44□□□□□ -0.1
CASC4-205ENST00000558735 TDRD3Q9H7E2 651 aaKnown RBP14.44□□□□□ -0.1
CASC4-205ENST00000558735 ZNF70Q9UC06 446 aaPredicted RBP14.44□□□□□ -0.1
CASC4-205ENST00000558735 SERPINA10Q9UK55 444 aa14.44□□□□□ -0.1
CASC4-205ENST00000558735 A0A1B0GUL6 1792 aa14.44□□□□□ -0.1
CASC4-205ENST00000558735 EYA2O00167 538 aa14.43□□□□□ -0.1
CASC4-205ENST00000558735 SUPT20HL1Q3ZLR7 823 aa14.43□□□□□ -0.1
CASC4-205ENST00000558735 SPDYE2Q495Y8 402 aa14.43□□□□□ -0.1
CASC4-205ENST00000558735 ATG9AQ7Z3C6 839 aa14.43□□□□□ -0.1
CASC4-205ENST00000558735 CLMNQ96JQ2 1002 aa14.43□□□□□ -0.1
CASC4-205ENST00000558735 CRKP46108 304 aa14.42□□□□□ -0.1
CASC4-205ENST00000558735 RARSP54136 660 aaKnown RBP14.42□□□□□ -0.1
CASC4-205ENST00000558735 CHAF1AQ13111 956 aaPredicted RBP14.42□□□□□ -0.1
CASC4-205ENST00000558735 OTUD7BQ6GQQ9 843 aa14.42□□□□□ -0.1
CASC4-205ENST00000558735 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.42□□□□□ -0.1
CASC4-205ENST00000558735 KIAA0100Q14667 2235 aaKnown RBP14.42□□□□□ -0.1
CASC4-205ENST00000558735 FRAT2O75474 233 aaPredicted RBP14.41□□□□□ -0.1
CASC4-205ENST00000558735 IFIT1P09914 478 aaKnown RBP14.41□□□□□ -0.1
CASC4-205ENST00000558735 UBTFL1P0CB47 393 aaPredicted RBP14.41□□□□□ -0.1
CASC4-205ENST00000558735 HDLBPQ00341 1268 aaKnown RBP14.41□□□□□ -0.1
CASC4-205ENST00000558735 CRHR2Q13324 411 aa14.41□□□□□ -0.1
CASC4-205ENST00000558735 CD99L2Q8TCZ2 262 aa14.41□□□□□ -0.1
CASC4-205ENST00000558735 TEPSINQ96N21 525 aa14.41□□□□□ -0.1
CASC4-205ENST00000558735 MRIQ9BWK5 157 aa14.41□□□□□ -0.1
CASC4-205ENST00000558735 EFCC1Q9HA90 598 aa14.41□□□□□ -0.1
CASC4-205ENST00000558735 TCP10L2B9ZVM9 353 aa14.4□□□□□ -0.1
CASC4-205ENST00000558735 EN2P19622 333 aaPredicted RBP14.4□□□□□ -0.1
CASC4-205ENST00000558735 GJA5P36382 358 aa14.4□□□□□ -0.1
CASC4-205ENST00000558735 SP3Q02447 781 aa14.4□□□□□ -0.1
CASC4-205ENST00000558735 PUM3Q15397 648 aaKnown RBP14.4□□□□□ -0.1
CASC4-205ENST00000558735 CDAN1Q8IWY9 1227 aa14.4□□□□□ -0.1
CASC4-205ENST00000558735 TBC1D22AQ8WUA7 517 aa14.4□□□□□ -0.1
CASC4-205ENST00000558735 ZNF333Q96JL9 665 aa14.4□□□□□ -0.1
CASC4-205ENST00000558735 PTPN18Q99952 460 aa14.4□□□□□ -0.1
CASC4-205ENST00000558735 API5Q9BZZ5 524 aaKnown RBP14.4□□□□□ -0.1
CASC4-205ENST00000558735 IREB2P48200 963 aaKnown RBP14.39□□□□□ -0.11
CASC4-205ENST00000558735 CAP1Q01518 475 aa14.39□□□□□ -0.11
CASC4-205ENST00000558735 TNFAIP1Q13829 316 aa14.39□□□□□ -0.11
CASC4-205ENST00000558735 ANKRD13AQ8IZ07 590 aa14.39□□□□□ -0.11
CASC4-205ENST00000558735 LPIN2Q92539 896 aa14.39□□□□□ -0.11
CASC4-205ENST00000558735 SIL1Q9H173 461 aa14.39□□□□□ -0.11
CASC4-205ENST00000558735 FBXO3Q9UK99 471 aa14.39□□□□□ -0.11
CASC4-205ENST00000558735 LRRFIP2Q9Y608 721 aaKnown RBP14.39□□□□□ -0.11
CASC4-205ENST00000558735 KIF16BQ96L93 1317 aa14.39□□□□□ -0.11
CASC4-205ENST00000558735 APOBEC3HQ6NTF7 200 aaKnown RBP14.38□□□□□ -0.11
CASC4-205ENST00000558735 ARHGAP45Q92619 1136 aa14.38□□□□□ -0.11
CASC4-205ENST00000558735 MS4A4AQ96JQ5 239 aa14.38□□□□□ -0.11
CASC4-205ENST00000558735 MEIS3Q99687 375 aa14.38□□□□□ -0.11
CASC4-205ENST00000558735 TMEM39BQ9GZU3 492 aa14.38□□□□□ -0.11
CASC4-205ENST00000558735 PA2G4Q9UQ80 394 aaKnown RBP14.38□□□□□ -0.11
CASC4-205ENST00000558735 SUGT1Q9Y2Z0 365 aa14.38□□□□□ -0.11
CASC4-205ENST00000558735 RANBP2P49792 3224 aaKnown RBP14.37□□□□□ -0.11
CASC4-205ENST00000558735 CIAO1O76071 339 aa14.37□□□□□ -0.11
CASC4-205ENST00000558735 SLC5A1P13866 664 aa14.37□□□□□ -0.11
CASC4-205ENST00000558735 CACNB3P54284 484 aa14.37□□□□□ -0.11
CASC4-205ENST00000558735 ARHGEF6Q15052 776 aa14.37□□□□□ -0.11
CASC4-205ENST00000558735 TEKT1Q969V4 418 aa14.37□□□□□ -0.11
CASC4-205ENST00000558735 ZDHHC15Q96MV8 337 aa14.37□□□□□ -0.11
CASC4-205ENST00000558735 CEP126Q9P2H0 1117 aa14.37□□□□□ -0.11
CASC4-205ENST00000558735 ECM29Q5VYK3 1845 aa14.36□□□□□ -0.11
CASC4-205ENST00000558735 HHIPL2Q6UWX4 724 aa14.36□□□□□ -0.11
CASC4-205ENST00000558735 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.36□□□□□ -0.11
CASC4-205ENST00000558735 NBPF11Q86T75 865 aa14.36□□□□□ -0.11
CASC4-205ENST00000558735 WDR66Q8TBY9 1149 aa14.36□□□□□ -0.11
CASC4-205ENST00000558735 TMEM106CQ9BVX2 250 aa14.36□□□□□ -0.11
CASC4-205ENST00000558735 COPRSQ9NQ92 184 aa14.36□□□□□ -0.11
CASC4-205ENST00000558735 HDAC5Q9UQL6 1122 aa14.36□□□□□ -0.11
CASC4-205ENST00000558735 COLQQ9Y215 455 aaPredicted RBP14.36□□□□□ -0.11
CASC4-205ENST00000558735 SZT2Q5T011 3432 aa14.36□□□□□ -0.11
CASC4-205ENST00000558735 IL15P40933 162 aaPredicted RBP14.35□□□□□ -0.11
CASC4-205ENST00000558735 TNNI2P48788 182 aa14.35□□□□□ -0.11
CASC4-205ENST00000558735 MAP3K9P80192 1104 aa14.35□□□□□ -0.11
CASC4-205ENST00000558735 ATP2B3Q16720 1220 aa14.35□□□□□ -0.11
CASC4-205ENST00000558735 TNNQ9UQP3 1299 aa14.35□□□□□ -0.11
CASC4-205ENST00000558735 BCAR3O75815 825 aa14.34□□□□□ -0.11
CASC4-205ENST00000558735 FKBP1CQ5VVH2 108 aa14.34□□□□□ -0.11
CASC4-205ENST00000558735 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
CASC4-205ENST00000558735 BRI3BPQ8WY22 251 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms