RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 CEBPZQ03701 1054 aaKnown RBP18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 SCRN1Q12765 414 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 STK38Q15208 465 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 NUTM2DQ5VT03 806 aaPredicted RBP18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 SPECC1LQ69YQ0 1117 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 CNPY4Q8N129 248 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 EPC1Q9H2F5 836 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 SUFUQ9UMX1 484 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 FAM237AA0A1B0GTK4 181 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 PTPDC1A2A3K4 754 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 CTAGE15A4D2H0 777 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 CTAGE8P0CG41 777 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 AMPHP49418 695 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 SART3Q15020 963 aaKnown RBP18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 FOXR1Q6PIV2 292 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 CTAGE6Q86UF2 777 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 CTAGE4Q8IX94 777 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 FBXL16Q8N461 479 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 ZNF274Q96GC6 653 aaPredicted RBP18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 FAM227BQ96M60 508 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 CARD10Q9BWT7 1032 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 C19orf44Q9H6X5 657 aa18.53■□□□□ 0.56
HMBOX1-212ENST00000558662 MAP3K15Q6ZN16 1313 aa18.52■□□□□ 0.56
HMBOX1-212ENST00000558662 PEAK1Q9H792 1746 aa18.52■□□□□ 0.56
HMBOX1-212ENST00000558662 CTAGE9A4FU28 777 aa18.52■□□□□ 0.55
HMBOX1-212ENST00000558662 SPTLC2O15270 562 aa18.52■□□□□ 0.55
HMBOX1-212ENST00000558662 MNAT1P51948 309 aa18.52■□□□□ 0.55
HMBOX1-212ENST00000558662 BICC1Q9H694 974 aaKnown RBP18.52■□□□□ 0.55
HMBOX1-212ENST00000558662 DACH1Q9UI36 760 aa18.52■□□□□ 0.55
HMBOX1-212ENST00000558662 MTHFSDQ2M296 383 aaKnown RBP18.51■□□□□ 0.55
HMBOX1-212ENST00000558662 JMYQ8N9B5 988 aa18.51■□□□□ 0.55
HMBOX1-212ENST00000558662 ANKRD24Q8TF21 1146 aa18.51■□□□□ 0.55
HMBOX1-212ENST00000558662 RPGRIP1Q96KN7 1286 aa18.51■□□□□ 0.55
HMBOX1-212ENST00000558662 FSD1Q9BTV5 496 aa18.51■□□□□ 0.55
HMBOX1-212ENST00000558662 RBM28Q9NW13 759 aaKnown RBP18.51■□□□□ 0.55
HMBOX1-212ENST00000558662 A2ML1A8K2U0 1454 aa18.51■□□□□ 0.55
HMBOX1-212ENST00000558662 MRC1P22897 1456 aa18.51■□□□□ 0.55
HMBOX1-212ENST00000558662 A0A1B0GVL5 298 aa18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 KIF3CO14782 793 aa18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 RNF40O75150 1001 aa18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 PRPF6O94906 941 aaKnown RBP18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 HNRNPH1P31943 449 aaKnown RBP18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 BEND3Q5T5X7 828 aa18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 DHX32Q7L7V1 743 aaKnown RBP18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 TC2NQ8N9U0 490 aa18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 HOOK1Q9UJC3 728 aaKnown RBP18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 TTF2Q9UNY4 1162 aaKnown RBP18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 KDM6AO15550 1401 aaPredicted RBP18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 LAMA4Q16363 1823 aa18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 A0A0D9SFI3 127 aa18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 TARSL2A2RTX5 802 aaKnown RBP18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 TDO2P48775 406 aa18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 MLECQ14165 292 aa18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 PRPF38AQ8NAV1 312 aaKnown RBP18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 RUBCNQ92622 972 aa18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 CCDC51Q96ER9 411 aa18.5■□□□□ 0.55
HMBOX1-212ENST00000558662 SHTN1A0MZ66 631 aa18.49■□□□□ 0.55
HMBOX1-212ENST00000558662 ERCC3P19447 782 aa18.49■□□□□ 0.55
HMBOX1-212ENST00000558662 NBPF6Q5VWK0 638 aa18.49■□□□□ 0.55
HMBOX1-212ENST00000558662 B4GALNT4Q76KP1 1039 aa18.49■□□□□ 0.55
HMBOX1-212ENST00000558662 AACSQ86V21 672 aa18.49■□□□□ 0.55
HMBOX1-212ENST00000558662 DDX54Q8TDD1 881 aaKnown RBP18.49■□□□□ 0.55
HMBOX1-212ENST00000558662 SMARCC1Q92922 1105 aaPredicted RBP18.49■□□□□ 0.55
HMBOX1-212ENST00000558662 NBPF4Q96M43 638 aa18.49■□□□□ 0.55
HMBOX1-212ENST00000558662 PNKPQ96T60 521 aa18.49■□□□□ 0.55
HMBOX1-212ENST00000558662 MIS18AQ9NYP9 233 aa18.49■□□□□ 0.55
HMBOX1-212ENST00000558662 ANKARQ7Z5J8 1434 aa18.48■□□□□ 0.55
HMBOX1-212ENST00000558662 ATP1A3P13637 1013 aa18.48■□□□□ 0.55
HMBOX1-212ENST00000558662 TAF7Q15545 349 aaPredicted RBP18.48■□□□□ 0.55
HMBOX1-212ENST00000558662 E2F4Q16254 413 aa18.48■□□□□ 0.55
HMBOX1-212ENST00000558662 FAM177A1Q8N128 213 aaPredicted RBP18.48■□□□□ 0.55
HMBOX1-212ENST00000558662 CCDC148Q8NFR7 591 aa18.48■□□□□ 0.55
HMBOX1-212ENST00000558662 CABS1Q96KC9 395 aa18.48■□□□□ 0.55
HMBOX1-212ENST00000558662 FMNL2Q96PY5 1086 aa18.48■□□□□ 0.55
HMBOX1-212ENST00000558662 GNAT3A8MTJ3 354 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 EXOC5O00471 708 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 N4BP1O75113 896 aaKnown RBP18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 PPFIA1Q13136 1202 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 HDGFL1Q5TGJ6 251 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 ILDR1Q86SU0 546 aaPredicted RBP18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 AMOTL1Q8IY63 956 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 NUDT16Q96DE0 195 aaKnown RBP18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 TCEANC2Q96MN5 208 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 CARMIL3Q8ND23 1372 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 CDHR2Q9BYE9 1310 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 CTDNEP1O95476 244 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 INPP5BP32019 993 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 NEDD9Q14511 834 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 TOGARAM2Q6ZUX3 1019 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 FAM76AQ8TAV0 307 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 DPF2Q92785 391 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 NAPGQ99747 312 aaPredicted RBP18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 GNL3LQ9NVN8 582 aaKnown RBP18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 ZRANB1Q9UGI0 708 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 FAM169AQ9Y6X4 670 aa18.47■□□□□ 0.55
HMBOX1-212ENST00000558662 IGSF1Q8N6C5 1336 aa18.46■□□□□ 0.55
HMBOX1-212ENST00000558662 AKR1B15C9JRZ8 316 aaPredicted RBP18.46■□□□□ 0.55
HMBOX1-212ENST00000558662 DTNBO60941 627 aa18.46■□□□□ 0.55
HMBOX1-212ENST00000558662 PPP6R2O75170 966 aa18.46■□□□□ 0.55
HMBOX1-212ENST00000558662 MYCNP04198 464 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms