RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ZNF280AP59817 542 aaPredicted RBP19.21■□□□□ 0.67
LINC01220-201ENST00000558575 TFCP2Q12800 502 aa19.21■□□□□ 0.67
LINC01220-201ENST00000558575 G3BP1Q13283 466 aaKnown RBP eCLIP19.21■□□□□ 0.67
LINC01220-201ENST00000558575 FAM84BQ96KN1 310 aaPredicted RBP19.21■□□□□ 0.67
LINC01220-201ENST00000558575 CEP126Q9P2H0 1117 aa19.21■□□□□ 0.67
LINC01220-201ENST00000558575 PRAMEF18Q5VWM3 479 aa19.2■□□□□ 0.66
LINC01220-201ENST00000558575 IRX6P78412 446 aaPredicted RBP19.19■□□□□ 0.66
LINC01220-201ENST00000558575 EN2P19622 333 aaPredicted RBP19.18■□□□□ 0.66
LINC01220-201ENST00000558575 GYG1P46976 350 aa19.18■□□□□ 0.66
LINC01220-201ENST00000558575 PUM3Q15397 648 aaKnown RBP19.18■□□□□ 0.66
LINC01220-201ENST00000558575 PODNQ7Z5L7 613 aa19.18■□□□□ 0.66
LINC01220-201ENST00000558575 FBXO33Q7Z6M2 555 aa19.18■□□□□ 0.66
LINC01220-201ENST00000558575 COA1Q9GZY4 146 aa19.18■□□□□ 0.66
LINC01220-201ENST00000558575 CD209Q9NNX6 404 aa19.18■□□□□ 0.66
LINC01220-201ENST00000558575 EXOC6BQ9Y2D4 811 aa19.18■□□□□ 0.66
LINC01220-201ENST00000558575 A0A1B0GUL6 1792 aa19.18■□□□□ 0.66
LINC01220-201ENST00000558575 PITPNM2Q9BZ72 1349 aa19.18■□□□□ 0.66
LINC01220-201ENST00000558575 TIMM10P62072 90 aa19.17■□□□□ 0.66
LINC01220-201ENST00000558575 OTOP1Q7RTM1 612 aa19.17■□□□□ 0.66
LINC01220-201ENST00000558575 LPIN2Q92539 896 aa19.17■□□□□ 0.66
LINC01220-201ENST00000558575 TRIM17Q9Y577 477 aa19.17■□□□□ 0.66
LINC01220-201ENST00000558575 HMMRO75330 724 aa19.16■□□□□ 0.66
LINC01220-201ENST00000558575 BCAMP50895 628 aa19.16■□□□□ 0.66
LINC01220-201ENST00000558575 ATP2B3Q16720 1220 aa19.16■□□□□ 0.66
LINC01220-201ENST00000558575 G3V3G9 751 aa19.15■□□□□ 0.66
LINC01220-201ENST00000558575 IL1R1P14778 569 aa19.15■□□□□ 0.66
LINC01220-201ENST00000558575 ADORA1P30542 326 aa19.15■□□□□ 0.66
LINC01220-201ENST00000558575 HIBADHP31937 336 aaKnown RBP19.15■□□□□ 0.66
LINC01220-201ENST00000558575 SREBF2Q12772 1141 aa19.15■□□□□ 0.66
LINC01220-201ENST00000558575 DCAF8Q5TAQ9 597 aa19.15■□□□□ 0.66
LINC01220-201ENST00000558575 TDRD7Q8NHU6 1098 aaKnown RBP19.15■□□□□ 0.66
LINC01220-201ENST00000558575 MYOZ2Q9NPC6 264 aa19.15■□□□□ 0.66
LINC01220-201ENST00000558575 RANBP2P49792 3224 aaKnown RBP19.14■□□□□ 0.66
LINC01220-201ENST00000558575 ECM29Q5VYK3 1845 aa19.14■□□□□ 0.65
LINC01220-201ENST00000558575 A0A1B0GUL7 405 aa19.14■□□□□ 0.65
LINC01220-201ENST00000558575 DLL1O00548 723 aa19.14■□□□□ 0.65
LINC01220-201ENST00000558575 IFIT1P09914 478 aaKnown RBP19.14■□□□□ 0.65
LINC01220-201ENST00000558575 OS9Q13438 667 aaPredicted RBP19.14■□□□□ 0.65
LINC01220-201ENST00000558575 TTLL12Q14166 644 aaPredicted RBP19.14■□□□□ 0.65
LINC01220-201ENST00000558575 RSBN1LQ6PCB5 846 aaPredicted RBP19.14■□□□□ 0.65
LINC01220-201ENST00000558575 GMLQ99445 158 aa19.14■□□□□ 0.65
LINC01220-201ENST00000558575 SLC5A1P13866 664 aa19.13■□□□□ 0.65
LINC01220-201ENST00000558575 ZNF804AQ7Z570 1209 aa19.13■□□□□ 0.65
LINC01220-201ENST00000558575 AGBL3Q8NEM8 1001 aa19.13■□□□□ 0.65
LINC01220-201ENST00000558575 MXD3Q9BW11 206 aa19.13■□□□□ 0.65
LINC01220-201ENST00000558575 DCTPP1Q9H773 170 aa19.13■□□□□ 0.65
LINC01220-201ENST00000558575 GPR108Q9NPR9 543 aa19.13■□□□□ 0.65
LINC01220-201ENST00000558575 AAMPQ13685 434 aa19.12■□□□□ 0.65
LINC01220-201ENST00000558575 TNNI3KQ59H18 835 aa19.12■□□□□ 0.65
LINC01220-201ENST00000558575 DACT2Q5SW24 774 aa19.12■□□□□ 0.65
LINC01220-201ENST00000558575 ARMC5Q96C12 935 aa19.12■□□□□ 0.65
LINC01220-201ENST00000558575 EAF2Q96CJ1 260 aaPredicted RBP19.12■□□□□ 0.65
LINC01220-201ENST00000558575 XAGE2Q96GT9 111 aa19.12■□□□□ 0.65
LINC01220-201ENST00000558575 AKAP2Q9Y2D5 859 aa19.12■□□□□ 0.65
LINC01220-201ENST00000558575 FPGT-TNNI3KV9GXZ4 949 aa19.12■□□□□ 0.65
LINC01220-201ENST00000558575 ZSWIM8A7E2V4 1837 aa19.11■□□□□ 0.65
LINC01220-201ENST00000558575 USP17L3A6NCW0 530 aa19.11■□□□□ 0.65
LINC01220-201ENST00000558575 USP17L4A6NCW7 530 aa19.11■□□□□ 0.65
LINC01220-201ENST00000558575 USP17L8P0C7I0 530 aa19.11■□□□□ 0.65
LINC01220-201ENST00000558575 PHKA1P46020 1223 aa19.11■□□□□ 0.65
LINC01220-201ENST00000558575 GTF2IP78347 998 aa19.11■□□□□ 0.65
LINC01220-201ENST00000558575 NBPF9Q3BBW0 867 aa19.11■□□□□ 0.65
LINC01220-201ENST00000558575 TTLL5Q6EMB2 1281 aa19.11■□□□□ 0.65
LINC01220-201ENST00000558575 USP17L1Q7RTZ2 530 aa19.11■□□□□ 0.65
LINC01220-201ENST00000558575 RHPN1Q8TCX5 695 aa19.11■□□□□ 0.65
LINC01220-201ENST00000558575 IQSEC3Q9UPP2 1182 aaPredicted RBP19.11■□□□□ 0.65
LINC01220-201ENST00000558575 PTPN22Q9Y2R2 807 aa19.11■□□□□ 0.65
LINC01220-201ENST00000558575 OTOFQ9HC10 1997 aa19.1■□□□□ 0.65
LINC01220-201ENST00000558575 APBB1O00213 710 aa19.1■□□□□ 0.65
LINC01220-201ENST00000558575 CAP1Q01518 475 aa19.1■□□□□ 0.65
LINC01220-201ENST00000558575 HSP90AB4PQ58FF6 505 aa19.1■□□□□ 0.65
LINC01220-201ENST00000558575 CAVIN4Q5BKX8 364 aa19.1■□□□□ 0.65
LINC01220-201ENST00000558575 STRIP1Q5VSL9 837 aa19.1■□□□□ 0.65
LINC01220-201ENST00000558575 SPRYD7Q5W111 196 aa19.1■□□□□ 0.65
LINC01220-201ENST00000558575 OTUD5Q96G74 571 aa19.1■□□□□ 0.65
LINC01220-201ENST00000558575 NEUROD6Q96NK8 337 aa19.1■□□□□ 0.65
LINC01220-201ENST00000558575 JAG2Q9Y219 1238 aa19.1■□□□□ 0.65
LINC01220-201ENST00000558575 FAM205AQ6ZU69 1335 aa19.09■□□□□ 0.65
LINC01220-201ENST00000558575 RAB11FIP3O75154 756 aa19.09■□□□□ 0.65
LINC01220-201ENST00000558575 CCDC102BQ68D86 513 aa19.09■□□□□ 0.65
LINC01220-201ENST00000558575 ERC1Q8IUD2 1116 aa19.09■□□□□ 0.65
LINC01220-201ENST00000558575 CERS5Q8N5B7 392 aa19.09■□□□□ 0.65
LINC01220-201ENST00000558575 IL1RAPL2Q9NP60 686 aa19.09■□□□□ 0.65
LINC01220-201ENST00000558575 COL6A3P12111 3177 aa19.08■□□□□ 0.65
LINC01220-201ENST00000558575 H0YGN5 161 aa19.08■□□□□ 0.64
LINC01220-201ENST00000558575 ALDH1A1P00352 501 aa19.08■□□□□ 0.64
LINC01220-201ENST00000558575 HDAC1Q13547 482 aaPredicted RBP19.08■□□□□ 0.64
LINC01220-201ENST00000558575 PRKG1Q13976 671 aa19.08■□□□□ 0.64
LINC01220-201ENST00000558575 VPS37DQ86XT2 251 aa19.08■□□□□ 0.64
LINC01220-201ENST00000558575 IFNL1Q8IU54 200 aa19.08■□□□□ 0.64
LINC01220-201ENST00000558575 CD99L2Q8TCZ2 262 aa19.08■□□□□ 0.64
LINC01220-201ENST00000558575 KIF1BPQ96EK5 621 aa19.08■□□□□ 0.64
LINC01220-201ENST00000558575 DBNDD2Q9BQY9 259 aa19.08■□□□□ 0.64
LINC01220-201ENST00000558575 CCDC8Q9H0W5 538 aaPredicted RBP19.08■□□□□ 0.64
LINC01220-201ENST00000558575 TLR7Q9NYK1 1049 aaKnown RBP19.08■□□□□ 0.64
LINC01220-201ENST00000558575 IGF2BP3O00425 579 aaKnown RBP eCLIP19.07■□□□□ 0.64
LINC01220-201ENST00000558575 IGHDP01880 384 aa19.07■□□□□ 0.64
LINC01220-201ENST00000558575 LDLRAD1Q5T700 205 aa19.07■□□□□ 0.64
LINC01220-201ENST00000558575 DBNLQ9UJU6 430 aaKnown RBP19.07■□□□□ 0.64
LINC01220-201ENST00000558575 FZD1Q9UP38 647 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms