RNA–Protein interactions for RNA: ENST00000558560.1

RMDN3-206, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-206ENST00000558560 TESPA1A2RU30 521 aaPredicted RBP23.33■■□□□ 1.33
RMDN3-206ENST00000558560 SLC34A2O95436 690 aa23.33■■□□□ 1.33
RMDN3-206ENST00000558560 CRKP46108 304 aa23.33■■□□□ 1.33
RMDN3-206ENST00000558560 SOX10P56693 466 aa23.33■■□□□ 1.33
RMDN3-206ENST00000558560 METTL24Q5JXM2 366 aa23.33■■□□□ 1.33
RMDN3-206ENST00000558560 OTOFQ9HC10 1997 aa23.32■■□□□ 1.32
RMDN3-206ENST00000558560 USP44Q9H0E7 712 aa23.32■■□□□ 1.32
RMDN3-206ENST00000558560 TDRD3Q9H7E2 651 aaKnown RBP23.32■■□□□ 1.32
RMDN3-206ENST00000558560 FZD1Q9UP38 647 aa23.32■■□□□ 1.32
RMDN3-206ENST00000558560 AOX1Q06278 1338 aa23.32■■□□□ 1.32
RMDN3-206ENST00000558560 SLFN5Q08AF3 891 aa23.31■■□□□ 1.32
RMDN3-206ENST00000558560 LRRC24Q50LG9 513 aa23.31■■□□□ 1.32
RMDN3-206ENST00000558560 FKBP1CQ5VVH2 108 aa23.31■■□□□ 1.32
RMDN3-206ENST00000558560 SSH1Q8WYL5 1049 aa23.31■■□□□ 1.32
RMDN3-206ENST00000558560 TEPSINQ96N21 525 aa23.31■■□□□ 1.32
RMDN3-206ENST00000558560 R3HDMLQ9H3Y0 253 aa23.31■■□□□ 1.32
RMDN3-206ENST00000558560 MYH13Q9UKX3 1938 aa23.31■■□□□ 1.32
RMDN3-206ENST00000558560 MAST3O60307 1309 aa23.31■■□□□ 1.32
RMDN3-206ENST00000558560 IGF2BP3O00425 579 aaKnown RBP eCLIP23.3■■□□□ 1.32
RMDN3-206ENST00000558560 FBXO3Q9UK99 471 aa23.3■■□□□ 1.32
RMDN3-206ENST00000558560 FRAT2O75474 233 aaPredicted RBP23.29■■□□□ 1.32
RMDN3-206ENST00000558560 IFIT1P09914 478 aaKnown RBP23.29■■□□□ 1.32
RMDN3-206ENST00000558560 CT47B1P0C2W7 299 aaPredicted RBP23.29■■□□□ 1.32
RMDN3-206ENST00000558560 PUM3Q15397 648 aaKnown RBP23.29■■□□□ 1.32
RMDN3-206ENST00000558560 TEKT1Q969V4 418 aa23.29■■□□□ 1.32
RMDN3-206ENST00000558560 HOOK2Q96ED9 719 aa23.29■■□□□ 1.32
RMDN3-206ENST00000558560 ZDHHC15Q96MV8 337 aa23.29■■□□□ 1.32
RMDN3-206ENST00000558560 FGFR2P21802 821 aa23.28■■□□□ 1.32
RMDN3-206ENST00000558560 FAM83AQ86UY5 434 aa23.28■■□□□ 1.32
RMDN3-206ENST00000558560 ERO1AQ96HE7 468 aa23.28■■□□□ 1.32
RMDN3-206ENST00000558560 HDAC5Q9UQL6 1122 aa23.28■■□□□ 1.32
RMDN3-206ENST00000558560 MAP3K9P80192 1104 aa23.27■■□□□ 1.32
RMDN3-206ENST00000558560 EYA2O00167 538 aa23.26■■□□□ 1.31
RMDN3-206ENST00000558560 GJA5P36382 358 aa23.26■■□□□ 1.31
RMDN3-206ENST00000558560 INTS3Q68E01 1043 aaKnown RBP23.26■■□□□ 1.31
RMDN3-206ENST00000558560 HHIPL2Q6UWX4 724 aa23.26■■□□□ 1.31
RMDN3-206ENST00000558560 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.26■■□□□ 1.31
RMDN3-206ENST00000558560 OPTNQ96CV9 577 aa23.26■■□□□ 1.31
RMDN3-206ENST00000558560 TMOD2Q9NZR1 351 aa23.26■■□□□ 1.31
RMDN3-206ENST00000558560 TCP10L2B9ZVM9 353 aa23.25■■□□□ 1.31
RMDN3-206ENST00000558560 ZBTB22O15209 634 aa23.25■■□□□ 1.31
RMDN3-206ENST00000558560 RFX5P48382 616 aaPredicted RBP23.25■■□□□ 1.31
RMDN3-206ENST00000558560 CHAF1AQ13111 956 aaPredicted RBP23.25■■□□□ 1.31
RMDN3-206ENST00000558560 TRMT2AQ8IZ69 625 aaKnown RBP23.25■■□□□ 1.31
RMDN3-206ENST00000558560 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.25■■□□□ 1.31
RMDN3-206ENST00000558560 WDR66Q8TBY9 1149 aa23.25■■□□□ 1.31
RMDN3-206ENST00000558560 LPIN2Q92539 896 aa23.25■■□□□ 1.31
RMDN3-206ENST00000558560 MS4A4AQ96JQ5 239 aa23.25■■□□□ 1.31
RMDN3-206ENST00000558560 TMEM39BQ9GZU3 492 aa23.25■■□□□ 1.31
RMDN3-206ENST00000558560 CSADQ9Y600 493 aa23.25■■□□□ 1.31
RMDN3-206ENST00000558560 SLC5A1P13866 664 aa23.24■■□□□ 1.31
RMDN3-206ENST00000558560 BCAMP50895 628 aa23.24■■□□□ 1.31
RMDN3-206ENST00000558560 GTF2A2P52657 109 aa23.24■■□□□ 1.31
RMDN3-206ENST00000558560 CRHR2Q13324 411 aa23.24■■□□□ 1.31
RMDN3-206ENST00000558560 OTOP1Q7RTM1 612 aa23.24■■□□□ 1.31
RMDN3-206ENST00000558560 PTPN18Q99952 460 aa23.24■■□□□ 1.31
RMDN3-206ENST00000558560 IQSEC3Q9UPP2 1182 aaPredicted RBP23.24■■□□□ 1.31
RMDN3-206ENST00000558560 TRIM17Q9Y577 477 aa23.24■■□□□ 1.31
RMDN3-206ENST00000558560 RPAP1Q9BWH6 1393 aaPredicted RBP23.24■■□□□ 1.31
RMDN3-206ENST00000558560 KIAA0100Q14667 2235 aaKnown RBP23.23■■□□□ 1.31
RMDN3-206ENST00000558560 ARHGEF6Q15052 776 aa23.23■■□□□ 1.31
RMDN3-206ENST00000558560 GRIK5Q16478 980 aa23.23■■□□□ 1.31
RMDN3-206ENST00000558560 ELP3Q9H9T3 547 aa23.23■■□□□ 1.31
RMDN3-206ENST00000558560 ZCCHC17Q9NP64 241 aaKnown RBP23.23■■□□□ 1.31
RMDN3-206ENST00000558560 RBBP6Q7Z6E9 1792 aaKnown RBP23.22■■□□□ 1.31
RMDN3-206ENST00000558560 CIAO1O76071 339 aa23.22■■□□□ 1.31
RMDN3-206ENST00000558560 SP3Q02447 781 aa23.22■■□□□ 1.31
RMDN3-206ENST00000558560 VGLL4Q14135 290 aa23.22■■□□□ 1.31
RMDN3-206ENST00000558560 APOBEC3HQ6NTF7 200 aaKnown RBP23.22■■□□□ 1.31
RMDN3-206ENST00000558560 KLHDC4Q8TBB5 520 aa23.22■■□□□ 1.31
RMDN3-206ENST00000558560 SMC4Q9NTJ3 1288 aa23.22■■□□□ 1.31
RMDN3-206ENST00000558560 PRPF38BQ5VTL8 546 aaKnown RBP23.21■■□□□ 1.31
RMDN3-206ENST00000558560 SPDYE5A6NIY4 337 aa23.2■■□□□ 1.3
RMDN3-206ENST00000558560 WDHD1O75717 1129 aaPredicted RBP23.2■■□□□ 1.3
RMDN3-206ENST00000558560 UBTFL1P0CB47 393 aaPredicted RBP23.2■■□□□ 1.3
RMDN3-206ENST00000558560 DCAF15Q66K64 600 aa23.2■■□□□ 1.3
RMDN3-206ENST00000558560 ERO1BQ86YB8 467 aa23.2■■□□□ 1.3
RMDN3-206ENST00000558560 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.2■■□□□ 1.3
RMDN3-206ENST00000558560 PTPN22Q9Y2R2 807 aa23.2■■□□□ 1.3
RMDN3-206ENST00000558560 ATG9AQ7Z3C6 839 aa23.19■■□□□ 1.3
RMDN3-206ENST00000558560 CDAN1Q8IWY9 1227 aa23.19■■□□□ 1.3
RMDN3-206ENST00000558560 BRI3BPQ8WY22 251 aa23.19■■□□□ 1.3
RMDN3-206ENST00000558560 EFCC1Q9HA90 598 aa23.19■■□□□ 1.3
RMDN3-206ENST00000558560 ZFYVE28Q9HCC9 887 aa23.19■■□□□ 1.3
RMDN3-206ENST00000558560 GNL3LQ9NVN8 582 aaKnown RBP23.19■■□□□ 1.3
RMDN3-206ENST00000558560 AK9Q5TCS8 1911 aa23.19■■□□□ 1.3
RMDN3-206ENST00000558560 SEMA3EO15041 775 aa23.18■■□□□ 1.3
RMDN3-206ENST00000558560 API5Q9BZZ5 524 aaKnown RBP23.18■■□□□ 1.3
RMDN3-206ENST00000558560 CEP126Q9P2H0 1117 aa23.18■■□□□ 1.3
RMDN3-206ENST00000558560 SALL1Q9NSC2 1324 aa23.17■■□□□ 1.3
RMDN3-206ENST00000558560 CCL15-CCL14A0A0B4J2E2 113 aa23.17■■□□□ 1.3
RMDN3-206ENST00000558560 CETPP11597 493 aa23.17■■□□□ 1.3
RMDN3-206ENST00000558560 CCL15Q16663 113 aa23.17■■□□□ 1.3
RMDN3-206ENST00000558560 CD99L2Q8TCZ2 262 aa23.17■■□□□ 1.3
RMDN3-206ENST00000558560 FAM151AQ8WW52 585 aa23.17■■□□□ 1.3
RMDN3-206ENST00000558560 ARMC5Q96C12 935 aa23.17■■□□□ 1.3
RMDN3-206ENST00000558560 HTTP42858 3142 aa23.17■■□□□ 1.3
RMDN3-206ENST00000558560 TAF1CQ15572 869 aaPredicted RBP23.16■■□□□ 1.3
RMDN3-206ENST00000558560 OTUD5Q96G74 571 aa23.16■■□□□ 1.3
RMDN3-206ENST00000558560 CDCA7LQ96GN5 454 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms