RNA–Protein interactions for RNA: ENST00000558509.5

IDH3A-205, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-205ENST00000558509 E9PSI1 815 aa18.72■□□□□ 0.59
IDH3A-205ENST00000558509 CACNB3P54284 484 aa18.72■□□□□ 0.59
IDH3A-205ENST00000558509 METTL24Q5JXM2 366 aa18.72■□□□□ 0.59
IDH3A-205ENST00000558509 DZIP1LQ8IYY4 767 aaKnown RBP18.72■□□□□ 0.59
IDH3A-205ENST00000558509 SLC10A4Q96EP9 437 aa18.72■□□□□ 0.59
IDH3A-205ENST00000558509 TMEM39BQ9GZU3 492 aa18.72■□□□□ 0.59
IDH3A-205ENST00000558509 SERPINA10Q9UK55 444 aa18.72■□□□□ 0.59
IDH3A-205ENST00000558509 TCP10L2B9ZVM9 353 aa18.71■□□□□ 0.59
IDH3A-205ENST00000558509 MYO1BO43795 1136 aa18.71■□□□□ 0.59
IDH3A-205ENST00000558509 FGFR2P21802 821 aa18.71■□□□□ 0.59
IDH3A-205ENST00000558509 BCAMP50895 628 aa18.71■□□□□ 0.59
IDH3A-205ENST00000558509 IFNL1Q8IU54 200 aa18.71■□□□□ 0.59
IDH3A-205ENST00000558509 PPP1R12BO60237 982 aaPredicted RBP18.7■□□□□ 0.58
IDH3A-205ENST00000558509 PDE8BO95263 885 aa18.7■□□□□ 0.58
IDH3A-205ENST00000558509 NOM1Q5C9Z4 860 aaKnown RBP18.7■□□□□ 0.58
IDH3A-205ENST00000558509 PTPN18Q99952 460 aa18.7■□□□□ 0.58
IDH3A-205ENST00000558509 MANSC4A6NHS7 340 aaPredicted RBP18.69■□□□□ 0.58
IDH3A-205ENST00000558509 FKTNO75072 461 aa18.69■□□□□ 0.58
IDH3A-205ENST00000558509 ZBTB48P10074 688 aaPredicted RBP18.69■□□□□ 0.58
IDH3A-205ENST00000558509 SUPT20HL1Q3ZLR7 823 aa18.69■□□□□ 0.58
IDH3A-205ENST00000558509 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.69■□□□□ 0.58
IDH3A-205ENST00000558509 TRMT2AQ8IZ69 625 aaKnown RBP18.69■□□□□ 0.58
IDH3A-205ENST00000558509 ELP3Q9H9T3 547 aa18.69■□□□□ 0.58
IDH3A-205ENST00000558509 CENPFP49454 3210 aa18.68■□□□□ 0.58
IDH3A-205ENST00000558509 ATG9AQ7Z3C6 839 aa18.68■□□□□ 0.58
IDH3A-205ENST00000558509 IREB2P48200 963 aaKnown RBP18.67■□□□□ 0.58
IDH3A-205ENST00000558509 ANKRD13AQ8IZ07 590 aa18.67■□□□□ 0.58
IDH3A-205ENST00000558509 SMC4Q9NTJ3 1288 aa18.67■□□□□ 0.58
IDH3A-205ENST00000558509 RBBP6Q7Z6E9 1792 aaKnown RBP18.67■□□□□ 0.58
IDH3A-205ENST00000558509 EYA2O00167 538 aa18.66■□□□□ 0.58
IDH3A-205ENST00000558509 CRHR2Q13324 411 aa18.66■□□□□ 0.58
IDH3A-205ENST00000558509 VGLL4Q14135 290 aa18.66■□□□□ 0.58
IDH3A-205ENST00000558509 FBXO46Q6PJ61 603 aaPredicted RBP18.66■□□□□ 0.58
IDH3A-205ENST00000558509 VPS37DQ86XT2 251 aa18.66■□□□□ 0.58
IDH3A-205ENST00000558509 OPTNQ96CV9 577 aa18.66■□□□□ 0.58
IDH3A-205ENST00000558509 MS4A4AQ96JQ5 239 aa18.66■□□□□ 0.58
IDH3A-205ENST00000558509 BRCA2P51587 3418 aa18.65■□□□□ 0.58
IDH3A-205ENST00000558509 PUM3Q15397 648 aaKnown RBP18.65■□□□□ 0.58
IDH3A-205ENST00000558509 ALDH1L2Q3SY69 923 aa18.65■□□□□ 0.58
IDH3A-205ENST00000558509 APOBEC3HQ6NTF7 200 aaKnown RBP18.65■□□□□ 0.58
IDH3A-205ENST00000558509 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.65■□□□□ 0.58
IDH3A-205ENST00000558509 BRI3BPQ8WY22 251 aa18.65■□□□□ 0.58
IDH3A-205ENST00000558509 TESPA1A2RU30 521 aaPredicted RBP18.64■□□□□ 0.57
IDH3A-205ENST00000558509 TNFAIP1Q13829 316 aa18.64■□□□□ 0.57
IDH3A-205ENST00000558509 PKN2Q16513 984 aaKnown RBP18.64■□□□□ 0.57
IDH3A-205ENST00000558509 OTOP1Q7RTM1 612 aa18.64■□□□□ 0.57
IDH3A-205ENST00000558509 CD99L2Q8TCZ2 262 aa18.64■□□□□ 0.57
IDH3A-205ENST00000558509 SIL1Q9H173 461 aa18.64■□□□□ 0.57
IDH3A-205ENST00000558509 KIF16BQ96L93 1317 aa18.64■□□□□ 0.57
IDH3A-205ENST00000558509 MYH2Q9UKX2 1941 aa18.64■□□□□ 0.57
IDH3A-205ENST00000558509 DOCK2Q92608 1830 aa18.63■□□□□ 0.57
IDH3A-205ENST00000558509 AK9Q5TCS8 1911 aa18.63■□□□□ 0.57
IDH3A-205ENST00000558509 UNCXA6NJT0 531 aa18.63■□□□□ 0.57
IDH3A-205ENST00000558509 SLC34A2O95436 690 aa18.63■□□□□ 0.57
IDH3A-205ENST00000558509 ALDH1A1P00352 501 aa18.63■□□□□ 0.57
IDH3A-205ENST00000558509 HDLBPQ00341 1268 aaKnown RBP18.63■□□□□ 0.57
IDH3A-205ENST00000558509 CAVIN4Q5BKX8 364 aa18.63■□□□□ 0.57
IDH3A-205ENST00000558509 TBC1D22AQ8WUA7 517 aa18.63■□□□□ 0.57
IDH3A-205ENST00000558509 TEKT1Q969V4 418 aa18.63■□□□□ 0.57
IDH3A-205ENST00000558509 ZDHHC15Q96MV8 337 aa18.63■□□□□ 0.57
IDH3A-205ENST00000558509 NOB1Q9ULX3 412 aaKnown RBP18.63■□□□□ 0.57
IDH3A-205ENST00000558509 PA2G4Q9UQ80 394 aaKnown RBP18.63■□□□□ 0.57
IDH3A-205ENST00000558509 SNCAIPQ9Y6H5 919 aa18.63■□□□□ 0.57
IDH3A-205ENST00000558509 FRAT2O75474 233 aaPredicted RBP18.62■□□□□ 0.57
IDH3A-205ENST00000558509 INHBEP58166 350 aa18.62■□□□□ 0.57
IDH3A-205ENST00000558509 TRIM17Q9Y577 477 aa18.62■□□□□ 0.57
IDH3A-205ENST00000558509 LRRFIP2Q9Y608 721 aaKnown RBP18.62■□□□□ 0.57
IDH3A-205ENST00000558509 MKI67P46013 3256 aaKnown RBP18.61■□□□□ 0.57
IDH3A-205ENST00000558509 DIXDC1Q155Q3 683 aa18.61■□□□□ 0.57
IDH3A-205ENST00000558509 OTUD5Q96G74 571 aa18.61■□□□□ 0.57
IDH3A-205ENST00000558509 MEIS3Q99687 375 aa18.61■□□□□ 0.57
IDH3A-205ENST00000558509 TNNQ9UQP3 1299 aa18.61■□□□□ 0.57
IDH3A-205ENST00000558509 IFIT1P09914 478 aaKnown RBP18.6■□□□□ 0.57
IDH3A-205ENST00000558509 SLC5A1P13866 664 aa18.6■□□□□ 0.57
IDH3A-205ENST00000558509 PRDX5P30044 214 aa18.6■□□□□ 0.57
IDH3A-205ENST00000558509 ADORA1P30542 326 aa18.6■□□□□ 0.57
IDH3A-205ENST00000558509 MAP3K9P80192 1104 aa18.6■□□□□ 0.57
IDH3A-205ENST00000558509 FAM43AQ8N2R8 423 aa18.6■□□□□ 0.57
IDH3A-205ENST00000558509 LPIN2Q92539 896 aa18.6■□□□□ 0.57
IDH3A-205ENST00000558509 ZKSCAN4Q969J2 545 aaPredicted RBP18.6■□□□□ 0.57
IDH3A-205ENST00000558509 DAGLAQ9Y4D2 1042 aa18.6■□□□□ 0.57
IDH3A-205ENST00000558509 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.6■□□□□ 0.57
IDH3A-205ENST00000558509 RPAP1Q9BWH6 1393 aaPredicted RBP18.59■□□□□ 0.57
IDH3A-205ENST00000558509 CCL15-CCL14A0A0B4J2E2 113 aa18.59■□□□□ 0.57
IDH3A-205ENST00000558509 UBTFL1P0CB47 393 aaPredicted RBP18.59■□□□□ 0.57
IDH3A-205ENST00000558509 PHKA1P46020 1223 aa18.59■□□□□ 0.57
IDH3A-205ENST00000558509 TNNI2P48788 182 aa18.59■□□□□ 0.57
IDH3A-205ENST00000558509 NFIAQ12857 509 aa18.59■□□□□ 0.57
IDH3A-205ENST00000558509 CCL15Q16663 113 aa18.59■□□□□ 0.57
IDH3A-205ENST00000558509 ATP2B3Q16720 1220 aa18.59■□□□□ 0.57
IDH3A-205ENST00000558509 KIAA0100Q14667 2235 aaKnown RBP18.59■□□□□ 0.57
IDH3A-205ENST00000558509 POTEFA5A3E0 1075 aa18.58■□□□□ 0.56
IDH3A-205ENST00000558509 SPDYE5A6NIY4 337 aa18.58■□□□□ 0.56
IDH3A-205ENST00000558509 WRNIP1Q96S55 665 aa18.58■□□□□ 0.56
IDH3A-205ENST00000558509 PTPRFP10586 1907 aa18.57■□□□□ 0.56
IDH3A-205ENST00000558509 CIAO1O76071 339 aa18.57■□□□□ 0.56
IDH3A-205ENST00000558509 INPP5BP32019 993 aa18.57■□□□□ 0.56
IDH3A-205ENST00000558509 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
IDH3A-205ENST00000558509 HHIPL2Q6UWX4 724 aa18.57■□□□□ 0.56
IDH3A-205ENST00000558509 FAM83AQ86UY5 434 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms