RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 DONSONQ9NYP3 566 aa12.86□□□□□ -0.35
PCAT29-201ENST00000558411 FLT4P35916 1363 aa12.86□□□□□ -0.35
PCAT29-201ENST00000558411 CCDC196A0A1B0GTZ2 297 aa12.86□□□□□ -0.35
PCAT29-201ENST00000558411 N4BP1O75113 896 aaKnown RBP12.86□□□□□ -0.35
PCAT29-201ENST00000558411 WDHD1O75717 1129 aaPredicted RBP12.86□□□□□ -0.35
PCAT29-201ENST00000558411 SART3Q15020 963 aaKnown RBP12.86□□□□□ -0.35
PCAT29-201ENST00000558411 TOGARAM2Q6ZUX3 1019 aa12.86□□□□□ -0.35
PCAT29-201ENST00000558411 DHX32Q7L7V1 743 aaKnown RBP12.86□□□□□ -0.35
PCAT29-201ENST00000558411 BRAPQ7Z569 592 aa12.86□□□□□ -0.35
PCAT29-201ENST00000558411 GPATCH11Q8N954 259 aa12.86□□□□□ -0.35
PCAT29-201ENST00000558411 TC2NQ8N9U0 490 aa12.86□□□□□ -0.35
PCAT29-201ENST00000558411 EAF2Q96CJ1 260 aaPredicted RBP12.86□□□□□ -0.35
PCAT29-201ENST00000558411 SIL1Q9H173 461 aa12.86□□□□□ -0.35
PCAT29-201ENST00000558411 TECPR2O15040 1411 aa12.86□□□□□ -0.35
PCAT29-201ENST00000558411 APPP05067 770 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 CCDC175P0C221 793 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 DIP2AQ14689 1571 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 CARMIL3Q8ND23 1372 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 CCDC102AQ96A19 550 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 ZNF274Q96GC6 653 aaPredicted RBP12.85□□□□□ -0.35
PCAT29-201ENST00000558411 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
PCAT29-201ENST00000558411 A2ML1A8K2U0 1454 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 TMEM232C9JQI7 657 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 PFKFB1P16118 471 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 SPECC1LQ69YQ0 1117 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 OLFM4Q6UX06 510 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 AFAP1L1Q8TED9 768 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 TACO1Q9BSH4 297 aaKnown RBP12.85□□□□□ -0.35
PCAT29-201ENST00000558411 C19orf44Q9H6X5 657 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 FAM204AQ9H8W3 233 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 INTS13Q9NVM9 706 aa12.85□□□□□ -0.35
PCAT29-201ENST00000558411 NRXN3Q9Y4C0 1643 aa12.84□□□□□ -0.35
PCAT29-201ENST00000558411 COL15A1P39059 1388 aa12.84□□□□□ -0.35
PCAT29-201ENST00000558411 PI4KAP2A4QPH2 592 aa12.84□□□□□ -0.35
PCAT29-201ENST00000558411 SASH1O94885 1247 aa12.84□□□□□ -0.35
PCAT29-201ENST00000558411 CYP21A2P08686 494 aa12.84□□□□□ -0.35
PCAT29-201ENST00000558411 ATP6V1AP38606 617 aa12.84□□□□□ -0.35
PCAT29-201ENST00000558411 G3BP1Q13283 466 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCAT29-201ENST00000558411 CT47A1Q5JQC4 288 aaPredicted RBP12.84□□□□□ -0.35
PCAT29-201ENST00000558411 WDR93Q6P2C0 686 aa12.84□□□□□ -0.35
PCAT29-201ENST00000558411 ARHGEF25Q86VW2 580 aa12.84□□□□□ -0.35
PCAT29-201ENST00000558411 PI4KAP1Q8N8J0 262 aa12.84□□□□□ -0.35
PCAT29-201ENST00000558411 ANKRD20A12PQ8NF67 263 aa12.84□□□□□ -0.35
PCAT29-201ENST00000558411 NAA15Q9BXJ9 866 aaKnown RBP12.84□□□□□ -0.35
PCAT29-201ENST00000558411 BOLA2Q9H3K6 86 aa12.84□□□□□ -0.35
PCAT29-201ENST00000558411 CLIC4Q9Y696 253 aa12.84□□□□□ -0.35
PCAT29-201ENST00000558411 KDM3BQ7LBC6 1761 aa12.83□□□□□ -0.35
PCAT29-201ENST00000558411 NCKAP5LQ9HCH0 1330 aa12.83□□□□□ -0.35
PCAT29-201ENST00000558411 KIF5CO60282 957 aa12.83□□□□□ -0.35
PCAT29-201ENST00000558411 ERLIN2O94905 339 aa12.83□□□□□ -0.35
PCAT29-201ENST00000558411 MAP2K2P36507 400 aa12.83□□□□□ -0.35
PCAT29-201ENST00000558411 FOSBP53539 338 aa12.83□□□□□ -0.35
PCAT29-201ENST00000558411 PIP4K2BP78356 416 aa12.83□□□□□ -0.35
PCAT29-201ENST00000558411 EXOSC10Q01780 885 aaKnown RBP12.83□□□□□ -0.35
PCAT29-201ENST00000558411 GOLGA8FQ08AF8 430 aa12.83□□□□□ -0.35
PCAT29-201ENST00000558411 GOLGA8DPQ0D2H9 430 aa12.83□□□□□ -0.35
PCAT29-201ENST00000558411 WHAMMP3Q1A5X7 153 aa12.83□□□□□ -0.35
PCAT29-201ENST00000558411 IL17REQ8NFR9 667 aa12.83□□□□□ -0.35
PCAT29-201ENST00000558411 PANX2Q96RD6 677 aa12.83□□□□□ -0.35
PCAT29-201ENST00000558411 PA2G4Q9UQ80 394 aaKnown RBP12.83□□□□□ -0.35
PCAT29-201ENST00000558411 USP6P35125 1406 aa12.83□□□□□ -0.36
PCAT29-201ENST00000558411 FAM237AA0A1B0GTK4 181 aa12.83□□□□□ -0.36
PCAT29-201ENST00000558411 SHOX2O60902 331 aaPredicted RBP12.83□□□□□ -0.36
PCAT29-201ENST00000558411 MICALL1Q8N3F8 863 aa12.83□□□□□ -0.36
PCAT29-201ENST00000558411 EYA1Q99502 592 aa12.83□□□□□ -0.36
PCAT29-201ENST00000558411 PRR36Q9H6K5 1346 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 MCM3P25205 808 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 VSNL1P62760 191 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 E2F4Q16254 413 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 ELOA2Q8IYF1 753 aaPredicted RBP12.82□□□□□ -0.36
PCAT29-201ENST00000558411 FBXL16Q8N461 479 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
PCAT29-201ENST00000558411 MRPL44Q9H9J2 332 aaKnown RBP12.82□□□□□ -0.36
PCAT29-201ENST00000558411 FANCLQ9NW38 375 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 PUF60Q9UHX1 559 aaKnown RBP12.82□□□□□ -0.36
PCAT29-201ENST00000558411 HPSEQ9Y251 543 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 SLIT1O75093 1534 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 CEMIPQ8WUJ3 1361 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 RNF40O75150 1001 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 PRPF6O94906 941 aaKnown RBP12.82□□□□□ -0.36
PCAT29-201ENST00000558411 SYKP43405 635 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 KARSQ15046 597 aaKnown RBP12.82□□□□□ -0.36
PCAT29-201ENST00000558411 MYSM1Q5VVJ2 828 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 PDILTQ8N807 584 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 BANK1Q8NDB2 785 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 ZSWIM4Q9H7M6 989 aa12.82□□□□□ -0.36
PCAT29-201ENST00000558411 A1CFQ9NQ94 594 aaKnown RBP12.82□□□□□ -0.36
PCAT29-201ENST00000558411 C9orf78Q9NZ63 289 aaPredicted RBP12.82□□□□□ -0.36
PCAT29-201ENST00000558411 PLEKHG3A1L390 1219 aa12.81□□□□□ -0.36
PCAT29-201ENST00000558411 CTAGE15A4D2H0 777 aa12.81□□□□□ -0.36
PCAT29-201ENST00000558411 CTAGE9A4FU28 777 aa12.81□□□□□ -0.36
PCAT29-201ENST00000558411 CTAGE8P0CG41 777 aa12.81□□□□□ -0.36
PCAT29-201ENST00000558411 ATP5JP18859 108 aa12.81□□□□□ -0.36
PCAT29-201ENST00000558411 PDIA3P30101 505 aaKnown RBP12.81□□□□□ -0.36
PCAT29-201ENST00000558411 GUCY1B3Q02153 619 aa12.81□□□□□ -0.36
PCAT29-201ENST00000558411 MCMDC2Q4G0Z9 681 aa12.81□□□□□ -0.36
PCAT29-201ENST00000558411 ANO1Q5XXA6 986 aa12.81□□□□□ -0.36
PCAT29-201ENST00000558411 STOX1Q6ZVD7 989 aa12.81□□□□□ -0.36
PCAT29-201ENST00000558411 CTAGE6Q86UF2 777 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms