RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 VPS37DQ86XT2 251 aa12.67□□□□□ -0.38
TPM1-212ENST00000558347 TNS4Q8IZW8 715 aa12.67□□□□□ -0.38
TPM1-212ENST00000558347 BCL11AQ9H165 835 aa12.67□□□□□ -0.38
TPM1-212ENST00000558347 PRDM10Q9NQV6 1147 aa12.67□□□□□ -0.38
TPM1-212ENST00000558347 CLRN2A0PK11 232 aa12.67□□□□□ -0.38
TPM1-212ENST00000558347 GNAI3P08754 354 aa12.67□□□□□ -0.38
TPM1-212ENST00000558347 IFIT1P09914 478 aaKnown RBP12.67□□□□□ -0.38
TPM1-212ENST00000558347 CHAF1AQ13111 956 aaPredicted RBP12.67□□□□□ -0.38
TPM1-212ENST00000558347 NOGQ13253 232 aa12.67□□□□□ -0.38
TPM1-212ENST00000558347 APOBEC3FQ8IUX4 373 aaKnown RBP12.67□□□□□ -0.38
TPM1-212ENST00000558347 TSKSQ9UJT2 592 aa12.67□□□□□ -0.38
TPM1-212ENST00000558347 TTF2Q9UNY4 1162 aaKnown RBP12.67□□□□□ -0.38
TPM1-212ENST00000558347 MYH13Q9UKX3 1938 aa12.66□□□□□ -0.38
TPM1-212ENST00000558347 UBE2Q2LH0YL09 131 aa12.66□□□□□ -0.38
TPM1-212ENST00000558347 CIAO1O76071 339 aa12.66□□□□□ -0.38
TPM1-212ENST00000558347 SLC10A3P09131 477 aa12.66□□□□□ -0.38
TPM1-212ENST00000558347 RBM5P52756 815 aaKnown RBP eCLIP12.66□□□□□ -0.38
TPM1-212ENST00000558347 FKBP1BP68106 108 aa12.66□□□□□ -0.38
TPM1-212ENST00000558347 LPIN2Q92539 896 aa12.66□□□□□ -0.38
TPM1-212ENST00000558347 CCDC102AQ96A19 550 aa12.66□□□□□ -0.38
TPM1-212ENST00000558347 BEGAINQ9BUH8 593 aa12.66□□□□□ -0.38
TPM1-212ENST00000558347 COPRSQ9NQ92 184 aa12.66□□□□□ -0.38
TPM1-212ENST00000558347 FBXO3Q9UK99 471 aa12.66□□□□□ -0.38
TPM1-212ENST00000558347 HDAC5Q9UQL6 1122 aa12.66□□□□□ -0.38
TPM1-212ENST00000558347 PCDHB15Q9Y5E8 787 aa12.66□□□□□ -0.38
TPM1-212ENST00000558347 COL1A1P02452 1464 aaPredicted RBP12.65□□□□□ -0.38
TPM1-212ENST00000558347 FRAT2O75474 233 aaPredicted RBP12.65□□□□□ -0.38
TPM1-212ENST00000558347 SLC5A1P13866 664 aa12.65□□□□□ -0.38
TPM1-212ENST00000558347 RASAL3Q86YV0 1011 aa12.65□□□□□ -0.38
TPM1-212ENST00000558347 DEFB129Q9H1M3 183 aa12.65□□□□□ -0.38
TPM1-212ENST00000558347 VEZTQ9HBM0 779 aa12.65□□□□□ -0.38
TPM1-212ENST00000558347 SERPINA10Q9UK55 444 aa12.65□□□□□ -0.38
TPM1-212ENST00000558347 FZD1Q9UP38 647 aa12.65□□□□□ -0.38
TPM1-212ENST00000558347 SSC5DA1L4H1 1573 aa12.64□□□□□ -0.39
TPM1-212ENST00000558347 SRGAP3O43295 1099 aa12.64□□□□□ -0.39
TPM1-212ENST00000558347 MYO1BO43795 1136 aa12.64□□□□□ -0.39
TPM1-212ENST00000558347 IL15P40933 162 aaPredicted RBP12.64□□□□□ -0.39
TPM1-212ENST00000558347 KIF23Q02241 960 aaPredicted RBP12.64□□□□□ -0.39
TPM1-212ENST00000558347 MTX1Q13505 466 aa12.64□□□□□ -0.39
TPM1-212ENST00000558347 PRKG1Q13976 671 aa12.64□□□□□ -0.39
TPM1-212ENST00000558347 ATP2B3Q16720 1220 aa12.64□□□□□ -0.39
TPM1-212ENST00000558347 SKAP1Q86WV1 359 aa12.64□□□□□ -0.39
TPM1-212ENST00000558347 CEP126Q9P2H0 1117 aa12.64□□□□□ -0.39
TPM1-212ENST00000558347 IGHDP01880 384 aa12.63□□□□□ -0.39
TPM1-212ENST00000558347 NF2P35240 595 aa12.63□□□□□ -0.39
TPM1-212ENST00000558347 CRKP46108 304 aa12.63□□□□□ -0.39
TPM1-212ENST00000558347 HDAC1Q13547 482 aaPredicted RBP12.63□□□□□ -0.39
TPM1-212ENST00000558347 TTLL12Q14166 644 aaPredicted RBP12.63□□□□□ -0.39
TPM1-212ENST00000558347 TBC1D22AQ8WUA7 517 aa12.63□□□□□ -0.39
TPM1-212ENST00000558347 TDRD3Q9H7E2 651 aaKnown RBP12.63□□□□□ -0.39
TPM1-212ENST00000558347 GNAI2P04899 355 aa12.62□□□□□ -0.39
TPM1-212ENST00000558347 SPDYE2Q495Y8 402 aa12.62□□□□□ -0.39
TPM1-212ENST00000558347 RWDD1Q9H446 243 aaPredicted RBP12.62□□□□□ -0.39
TPM1-212ENST00000558347 ZNF70Q9UC06 446 aaPredicted RBP12.62□□□□□ -0.39
TPM1-212ENST00000558347 DAXXQ9UER7 740 aaPredicted RBP12.62□□□□□ -0.39
TPM1-212ENST00000558347 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.62□□□□□ -0.39
TPM1-212ENST00000558347 PNMA6EA0A0J9YXQ4 647 aa12.62□□□□□ -0.39
TPM1-212ENST00000558347 CA12O43570 354 aa12.62□□□□□ -0.39
TPM1-212ENST00000558347 ADORA1P30542 326 aa12.62□□□□□ -0.39
TPM1-212ENST00000558347 RASA3Q14644 834 aa12.62□□□□□ -0.39
TPM1-212ENST00000558347 NBPF12Q5TAG4 269 aaPredicted RBP12.62□□□□□ -0.39
TPM1-212ENST00000558347 RPAP2Q8IXW5 612 aaPredicted RBP12.62□□□□□ -0.39
TPM1-212ENST00000558347 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
TPM1-212ENST00000558347 ANGEL1Q9UNK9 670 aaKnown RBP12.62□□□□□ -0.39
TPM1-212ENST00000558347 PPP2R3BQ9Y5P8 575 aa12.62□□□□□ -0.39
TPM1-212ENST00000558347 PHKA1P46020 1223 aa12.61□□□□□ -0.39
TPM1-212ENST00000558347 RGS3P49796 1198 aa12.61□□□□□ -0.39
TPM1-212ENST00000558347 HDLBPQ00341 1268 aaKnown RBP12.61□□□□□ -0.39
TPM1-212ENST00000558347 TFCP2Q12800 502 aa12.61□□□□□ -0.39
TPM1-212ENST00000558347 ARMC9Q7Z3E5 817 aa12.61□□□□□ -0.39
TPM1-212ENST00000558347 AKAP11Q9UKA4 1901 aa12.6□□□□□ -0.39
TPM1-212ENST00000558347 TCP10L2B9ZVM9 353 aa12.6□□□□□ -0.39
TPM1-212ENST00000558347 CAPN15O75808 1086 aa12.6□□□□□ -0.39
TPM1-212ENST00000558347 TIMM10P62072 90 aa12.6□□□□□ -0.39
TPM1-212ENST00000558347 LDLRAD1Q5T700 205 aa12.6□□□□□ -0.39
TPM1-212ENST00000558347 CDAN1Q8IWY9 1227 aa12.6□□□□□ -0.39
TPM1-212ENST00000558347 WDR66Q8TBY9 1149 aa12.6□□□□□ -0.39
TPM1-212ENST00000558347 TEKT1Q969V4 418 aa12.6□□□□□ -0.39
TPM1-212ENST00000558347 CASP8AP2Q9UKL3 1982 aa12.59□□□□□ -0.39
TPM1-212ENST00000558347 CACNB3P54284 484 aa12.59□□□□□ -0.39
TPM1-212ENST00000558347 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
TPM1-212ENST00000558347 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
TPM1-212ENST00000558347 CCDC102BQ68D86 513 aa12.59□□□□□ -0.39
TPM1-212ENST00000558347 APOBEC3HQ6NTF7 200 aaKnown RBP12.59□□□□□ -0.39
TPM1-212ENST00000558347 ZDHHC15Q96MV8 337 aa12.59□□□□□ -0.39
TPM1-212ENST00000558347 TEPSINQ96N21 525 aa12.59□□□□□ -0.39
TPM1-212ENST00000558347 MRIQ9BWK5 157 aa12.59□□□□□ -0.39
TPM1-212ENST00000558347 TMEM39BQ9GZU3 492 aa12.59□□□□□ -0.39
TPM1-212ENST00000558347 C1orf115Q9H7X2 142 aa12.59□□□□□ -0.39
TPM1-212ENST00000558347 RNF186Q9NXI6 227 aa12.59□□□□□ -0.39
TPM1-212ENST00000558347 SUGT1Q9Y2Z0 365 aa12.59□□□□□ -0.39
TPM1-212ENST00000558347 OTOFQ9HC10 1997 aa12.59□□□□□ -0.39
TPM1-212ENST00000558347 A0A1B0GUL7 405 aa12.58□□□□□ -0.4
TPM1-212ENST00000558347 TRPA1O75762 1119 aa12.58□□□□□ -0.4
TPM1-212ENST00000558347 PRDX5P30044 214 aa12.58□□□□□ -0.4
TPM1-212ENST00000558347 TNFAIP1Q13829 316 aa12.58□□□□□ -0.4
TPM1-212ENST00000558347 SUPT20HL1Q3ZLR7 823 aa12.58□□□□□ -0.4
TPM1-212ENST00000558347 CEP85Q6P2H3 762 aa12.58□□□□□ -0.4
TPM1-212ENST00000558347 SIRT2Q8IXJ6 389 aa12.58□□□□□ -0.4
TPM1-212ENST00000558347 GNL3LQ9NVN8 582 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms