RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 DCTPP1Q9H773 170 aa13.21□□□□□ -0.3
CSPG4P12-201ENST00000558282 ZNF131P52739 623 aa13.21□□□□□ -0.3
CSPG4P12-201ENST00000558282 PDE1CQ14123 709 aaPredicted RBP13.21□□□□□ -0.3
CSPG4P12-201ENST00000558282 VWA3BQ502W6 1294 aa13.21□□□□□ -0.3
CSPG4P12-201ENST00000558282 FCHSD1Q86WN1 690 aa13.21□□□□□ -0.3
CSPG4P12-201ENST00000558282 CFAP221Q4G0U5 840 aa13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 MLKLQ8NB16 471 aa13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 N4BP2L2Q92802 583 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 NLRP2Q9NX02 1062 aa13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 CAMSAP2Q08AD1 1489 aa13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 CCT5P48643 541 aa13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 RHPN1Q8TCX5 695 aa13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 IQCDQ96DY2 449 aa13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 GNAT3A8MTJ3 354 aa13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 CCDC63Q8NA47 563 aa13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 NOX5Q96PH1 765 aa13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 TRIM6Q9C030 488 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 KLHL14Q9P2G3 628 aa13.2□□□□□ -0.3
CSPG4P12-201ENST00000558282 TRIM75PA6NK02 468 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 MARCKSP29966 332 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 ZNF530Q6P9A1 599 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 NLRP12P59046 1061 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 AMOTQ4VCS5 1084 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 SAAL1Q96ER3 474 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 RABEP2Q9H5N1 569 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 PSMC4P43686 418 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 ATP2B2Q01814 1243 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 TTF1Q15361 905 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 CFAP157Q5JU67 520 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 TRIM68Q6AZZ1 485 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 GSTA5Q7RTV2 222 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 USP37Q86T82 979 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 CCHCR1Q8TD31 782 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 HOMER3Q9NSC5 361 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 CHUKO15111 745 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 COG7P83436 770 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 SEL1L2Q5TEA6 688 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 Q6ZUG5 572 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 MICU3Q86XE3 530 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 FBXO18Q8NFZ0 1043 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 JPH2Q9BR39 696 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 CSRNP2Q9H175 543 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
CSPG4P12-201ENST00000558282 RALGAPBQ86X10 1494 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 ZBTB43O43298 467 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 ZWINTO95229 277 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 BRD1O95696 1058 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 RUFY3Q7L099 469 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 CCDC25Q86WR0 208 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 NUCKS1Q9H1E3 243 aaKnown RBP13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 PPANQ9NQ55 473 aaKnown RBP13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 SAR1BQ9Y6B6 198 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 TCOF1Q13428 1488 aaKnown RBP13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 TTC41PQ6P2S7 1318 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 USP5P45974 858 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 FLIIQ13045 1269 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 PDE11AQ9HCR9 933 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 BTBD11A6QL63 1104 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 EVI5O60447 810 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 RAPGEF6Q8TEU7 1601 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 CDC25BP30305 580 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 E2F4Q16254 413 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 KRT71Q3SY84 523 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 CCDC82Q8N4S0 544 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 KRI1Q8N9T8 703 aaKnown RBP13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 IQUBQ8NA54 791 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 DHX58Q96C10 678 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 NCAPGQ9BPX3 1015 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 FAM204AQ9H8W3 233 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 CABP1Q9NZU7 370 aa13.18□□□□□ -0.3
CSPG4P12-201ENST00000558282 LRRC8AQ8IWT6 810 aa13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 PUS7Q96PZ0 661 aaKnown RBP13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 DDX21Q9NR30 783 aaKnown RBP eCLIP13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 CCDC151A5D8V7 595 aa13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 ANKRD20A3Q5VUR7 823 aa13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 SDCCAG8Q86SQ7 713 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 FERMT2Q96AC1 680 aa13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 LLPHQ9BRT6 129 aaKnown RBP13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 TXNDC9O14530 226 aa13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 TAF7Q15545 349 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 PLEKHM2Q8IWE5 1019 aa13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 BICD1Q96G01 975 aa13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 NDC80O14777 642 aa13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 TADA2BQ86TJ2 420 aa13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 CDK19Q9BWU1 502 aa13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 PARP2Q9UGN5 583 aa13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 STK38LQ9Y2H1 464 aa13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 ATP6V0A2Q9Y487 856 aa13.17□□□□□ -0.3
CSPG4P12-201ENST00000558282 CDK13Q14004 1512 aaKnown RBP13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 CLTAP09496 248 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 PPP2R5EQ16537 467 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 PPP1R42Q7Z4L9 355 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 CCDC65Q8IXS2 484 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 PRAM1Q96QH2 718 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 ZBTB40Q9NUA8 1239 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 PPP1R9AQ9ULJ8 1098 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 MINDY4BA8MYZ0 360 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 CREB3O43889 395 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms