RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 PITPNM2Q9BZ72 1349 aa14.71□□□□□ -0.05
CDK12-203ENST00000558240 ITGBL1O95965 494 aaPredicted RBP14.71□□□□□ -0.05
CDK12-203ENST00000558240 NBPF9Q3BBW0 867 aa14.71□□□□□ -0.05
CDK12-203ENST00000558240 CFAP100Q494V2 611 aa14.71□□□□□ -0.05
CDK12-203ENST00000558240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.71□□□□□ -0.05
CDK12-203ENST00000558240 DCPSQ96C86 337 aaKnown RBP14.71□□□□□ -0.05
CDK12-203ENST00000558240 SPDYE2BA6NHP3 402 aa14.7□□□□□ -0.06
CDK12-203ENST00000558240 IGSF3O75054 1194 aa14.7□□□□□ -0.06
CDK12-203ENST00000558240 SPDYE6P0CI01 402 aa14.7□□□□□ -0.06
CDK12-203ENST00000558240 PRDX5P30044 214 aa14.7□□□□□ -0.06
CDK12-203ENST00000558240 CRKP46108 304 aa14.7□□□□□ -0.06
CDK12-203ENST00000558240 RBM5P52756 815 aaKnown RBP eCLIP14.7□□□□□ -0.06
CDK12-203ENST00000558240 HHIPL2Q6UWX4 724 aa14.7□□□□□ -0.06
CDK12-203ENST00000558240 PI16Q6UXB8 463 aa14.7□□□□□ -0.06
CDK12-203ENST00000558240 ERICH6Q7L0X2 663 aa14.7□□□□□ -0.06
CDK12-203ENST00000558240 CDC37L1Q7L3B6 337 aa14.7□□□□□ -0.06
CDK12-203ENST00000558240 SMC5Q8IY18 1101 aa14.7□□□□□ -0.06
CDK12-203ENST00000558240 TEKT1Q969V4 418 aa14.7□□□□□ -0.06
CDK12-203ENST00000558240 PRMT6Q96LA8 375 aaPredicted RBP14.7□□□□□ -0.06
CDK12-203ENST00000558240 ABCF2Q9UG63 623 aa14.7□□□□□ -0.06
CDK12-203ENST00000558240 MYO1BO43795 1136 aa14.69□□□□□ -0.06
CDK12-203ENST00000558240 IGHDP01880 384 aa14.69□□□□□ -0.06
CDK12-203ENST00000558240 ZDHHC15Q96MV8 337 aa14.69□□□□□ -0.06
CDK12-203ENST00000558240 BCL11AQ9H165 835 aa14.69□□□□□ -0.06
CDK12-203ENST00000558240 SNRKQ9NRH2 765 aa14.69□□□□□ -0.06
CDK12-203ENST00000558240 GGA3Q9NZ52 723 aa14.69□□□□□ -0.06
CDK12-203ENST00000558240 ZBTB47Q9UFB7 747 aaPredicted RBP14.69□□□□□ -0.06
CDK12-203ENST00000558240 ASTN2O75129 1339 aaPredicted RBP14.68□□□□□ -0.06
CDK12-203ENST00000558240 PASKQ96RG2 1323 aa14.68□□□□□ -0.06
CDK12-203ENST00000558240 CYP2E1P05181 493 aaPredicted RBP14.68□□□□□ -0.06
CDK12-203ENST00000558240 ATP5JP18859 108 aa14.68□□□□□ -0.06
CDK12-203ENST00000558240 ZAP70P43403 619 aa14.68□□□□□ -0.06
CDK12-203ENST00000558240 ANKRD45Q5TZF3 282 aa14.68□□□□□ -0.06
CDK12-203ENST00000558240 ANGEL2Q5VTE6 544 aaKnown RBP14.68□□□□□ -0.06
CDK12-203ENST00000558240 TBC1D9Q6ZT07 1266 aa14.68□□□□□ -0.06
CDK12-203ENST00000558240 KRT26Q7Z3Y9 468 aa14.68□□□□□ -0.06
CDK12-203ENST00000558240 DZIP1Q86YF9 867 aaKnown RBP14.68□□□□□ -0.06
CDK12-203ENST00000558240 SULF1Q8IWU6 871 aa14.68□□□□□ -0.06
CDK12-203ENST00000558240 SLF2Q8IX21 1173 aa14.68□□□□□ -0.06
CDK12-203ENST00000558240 DOCK2Q92608 1830 aa14.68□□□□□ -0.06
CDK12-203ENST00000558240 USP48Q86UV5 1035 aa14.67□□□□□ -0.06
CDK12-203ENST00000558240 APOBEC3FQ8IUX4 373 aaKnown RBP14.67□□□□□ -0.06
CDK12-203ENST00000558240 FAM163AQ96GL9 167 aaPredicted RBP14.67□□□□□ -0.06
CDK12-203ENST00000558240 GPATCH3Q96I76 525 aa14.67□□□□□ -0.06
CDK12-203ENST00000558240 GLIS2Q9BZE0 524 aaPredicted RBP14.67□□□□□ -0.06
CDK12-203ENST00000558240 ECHDC1Q9NTX5 307 aa14.67□□□□□ -0.06
CDK12-203ENST00000558240 LRP2BPQ9P2M1 347 aa14.67□□□□□ -0.06
CDK12-203ENST00000558240 PCDHAC2Q9Y5I4 1007 aa14.67□□□□□ -0.06
CDK12-203ENST00000558240 MYH7P12883 1935 aa14.66□□□□□ -0.06
CDK12-203ENST00000558240 HSPA6P17066 643 aa14.66□□□□□ -0.06
CDK12-203ENST00000558240 APLP1P51693 650 aa14.66□□□□□ -0.06
CDK12-203ENST00000558240 GSTO1P78417 241 aa14.66□□□□□ -0.06
CDK12-203ENST00000558240 MECOMQ03112 1051 aa14.66□□□□□ -0.06
CDK12-203ENST00000558240 TTF1Q15361 905 aaPredicted RBP14.66□□□□□ -0.06
CDK12-203ENST00000558240 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
CDK12-203ENST00000558240 APOBEC3HQ6NTF7 200 aaKnown RBP14.66□□□□□ -0.06
CDK12-203ENST00000558240 NSUN4Q96CB9 384 aaKnown RBP14.66□□□□□ -0.06
CDK12-203ENST00000558240 RAI14Q9P0K7 980 aa14.66□□□□□ -0.06
CDK12-203ENST00000558240 DAGLAQ9Y4D2 1042 aa14.66□□□□□ -0.06
CDK12-203ENST00000558240 CEP350Q5VT06 3117 aa14.66□□□□□ -0.06
CDK12-203ENST00000558240 GAKO14976 1311 aa14.66□□□□□ -0.06
CDK12-203ENST00000558240 MAST2Q6P0Q8 1798 aa14.65□□□□□ -0.06
CDK12-203ENST00000558240 TRAF5O00463 557 aa14.65□□□□□ -0.06
CDK12-203ENST00000558240 LDHCP07864 332 aa14.65□□□□□ -0.06
CDK12-203ENST00000558240 DIXDC1Q155Q3 683 aa14.65□□□□□ -0.06
CDK12-203ENST00000558240 TMED8Q6PL24 325 aaPredicted RBP14.65□□□□□ -0.06
CDK12-203ENST00000558240 HAUS7Q99871 368 aa14.65□□□□□ -0.06
CDK12-203ENST00000558240 BOLA2Q9H3K6 86 aa14.65□□□□□ -0.06
CDK12-203ENST00000558240 TDRD3Q9H7E2 651 aaKnown RBP14.65□□□□□ -0.06
CDK12-203ENST00000558240 ZNF70Q9UC06 446 aaPredicted RBP14.65□□□□□ -0.06
CDK12-203ENST00000558240 AOX1Q06278 1338 aa14.65□□□□□ -0.06
CDK12-203ENST00000558240 TTC41PQ6P2S7 1318 aa14.65□□□□□ -0.06
CDK12-203ENST00000558240 AK9Q5TCS8 1911 aa14.64□□□□□ -0.07
CDK12-203ENST00000558240 CLRN2A0PK11 232 aa14.64□□□□□ -0.07
CDK12-203ENST00000558240 NUCB1Q02818 461 aa14.64□□□□□ -0.07
CDK12-203ENST00000558240 ZNF384Q8TF68 577 aa14.64□□□□□ -0.07
CDK12-203ENST00000558240 PIH1D3Q9NQM4 214 aaKnown RBP14.64□□□□□ -0.07
CDK12-203ENST00000558240 NDUFB9Q9Y6M9 179 aa14.64□□□□□ -0.07
CDK12-203ENST00000558240 ADM5C9JUS6 153 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 ERC2O15083 957 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 NEFLP07196 543 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 MX1P20591 662 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 MAP3K12Q12852 859 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 TNFAIP1Q13829 316 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 FKBP1CQ5VVH2 108 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 B4GALNT3Q6L9W6 998 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 NAA16Q6N069 864 aaPredicted RBP14.63□□□□□ -0.07
CDK12-203ENST00000558240 DNAJC2Q99543 621 aaKnown RBP14.63□□□□□ -0.07
CDK12-203ENST00000558240 DEFB129Q9H1M3 183 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 ANTXR1Q9H6X2 564 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 VEZTQ9HBM0 779 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 PPP2R3BQ9Y5P8 575 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 MROH7-TTC4A0A0A0MT08 1334 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 SALL3Q9BXA9 1300 aa14.63□□□□□ -0.07
CDK12-203ENST00000558240 GPR75-ASB3A0A0A6YYF3 556 aa14.62□□□□□ -0.07
CDK12-203ENST00000558240 TMEM88BA6NKF7 163 aa14.62□□□□□ -0.07
CDK12-203ENST00000558240 GOLIM4O00461 696 aa14.62□□□□□ -0.07
CDK12-203ENST00000558240 IDH1O75874 414 aaKnown RBP14.62□□□□□ -0.07
CDK12-203ENST00000558240 MAP4K4O95819 1239 aaPredicted RBP14.62□□□□□ -0.07
CDK12-203ENST00000558240 FMR1Q06787 632 aaKnown RBP eCLIP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms