RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 PAG1Q9NWQ8 432 aa12.73□□□□□ -0.37
LRRC28-204ENST00000558172 LRP2BPQ9P2M1 347 aa12.73□□□□□ -0.37
LRRC28-204ENST00000558172 TTF2Q9UNY4 1162 aaKnown RBP12.73□□□□□ -0.37
LRRC28-204ENST00000558172 MAST2Q6P0Q8 1798 aa12.72□□□□□ -0.37
LRRC28-204ENST00000558172 PDE4AP27815 886 aa12.72□□□□□ -0.37
LRRC28-204ENST00000558172 GSTO1P78417 241 aa12.72□□□□□ -0.37
LRRC28-204ENST00000558172 MAP3K12Q12852 859 aa12.72□□□□□ -0.37
LRRC28-204ENST00000558172 TBC1D9Q6ZT07 1266 aa12.72□□□□□ -0.37
LRRC28-204ENST00000558172 PNMA8AQ86V59 439 aaPredicted RBP12.72□□□□□ -0.37
LRRC28-204ENST00000558172 RRAGCQ9HB90 399 aa12.72□□□□□ -0.37
LRRC28-204ENST00000558172 GPBP1L1Q9HC44 474 aaPredicted RBP12.72□□□□□ -0.37
LRRC28-204ENST00000558172 RAI14Q9P0K7 980 aa12.72□□□□□ -0.37
LRRC28-204ENST00000558172 SERPINA10Q9UK55 444 aa12.72□□□□□ -0.37
LRRC28-204ENST00000558172 POTECB2RU33 542 aa12.71□□□□□ -0.37
LRRC28-204ENST00000558172 F8W031 263 aaPredicted RBP12.71□□□□□ -0.37
LRRC28-204ENST00000558172 GOLIM4O00461 696 aa12.71□□□□□ -0.37
LRRC28-204ENST00000558172 LDHCP07864 332 aa12.71□□□□□ -0.37
LRRC28-204ENST00000558172 PRDX5P30044 214 aa12.71□□□□□ -0.37
LRRC28-204ENST00000558172 EPHX2P34913 555 aa12.71□□□□□ -0.37
LRRC28-204ENST00000558172 EPS15P42566 896 aa12.71□□□□□ -0.37
LRRC28-204ENST00000558172 LRRFIP1Q32MZ4 808 aaKnown RBP12.71□□□□□ -0.37
LRRC28-204ENST00000558172 TSHZ3Q63HK5 1081 aa12.71□□□□□ -0.37
LRRC28-204ENST00000558172 ZSCAN25Q6NSZ9 544 aa12.71□□□□□ -0.37
LRRC28-204ENST00000558172 HHIPL2Q6UWX4 724 aa12.71□□□□□ -0.37
LRRC28-204ENST00000558172 USP50Q70EL3 339 aaPredicted RBP12.71□□□□□ -0.37
LRRC28-204ENST00000558172 TICAM2Q86XR7 235 aa12.71□□□□□ -0.37
LRRC28-204ENST00000558172 DZIP1Q86YF9 867 aaKnown RBP12.71□□□□□ -0.37
LRRC28-204ENST00000558172 MTMR14Q8NCE2 650 aa12.71□□□□□ -0.37
LRRC28-204ENST00000558172 ZNF526Q8TF50 670 aaPredicted RBP12.71□□□□□ -0.37
LRRC28-204ENST00000558172 TEKT1Q969V4 418 aa12.71□□□□□ -0.37
LRRC28-204ENST00000558172 TAF1DQ9H5J8 278 aaPredicted RBP12.71□□□□□ -0.37
LRRC28-204ENST00000558172 MYOZ2Q9NPC6 264 aa12.71□□□□□ -0.37
LRRC28-204ENST00000558172 CRKP46108 304 aa12.7□□□□□ -0.38
LRRC28-204ENST00000558172 DLGAP5Q15398 846 aa12.7□□□□□ -0.38
LRRC28-204ENST00000558172 GRIK5Q16478 980 aa12.7□□□□□ -0.38
LRRC28-204ENST00000558172 NSUN4Q96CB9 384 aaKnown RBP12.7□□□□□ -0.38
LRRC28-204ENST00000558172 FAM163AQ96GL9 167 aaPredicted RBP12.7□□□□□ -0.38
LRRC28-204ENST00000558172 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.7□□□□□ -0.38
LRRC28-204ENST00000558172 ANTXR1Q9H6X2 564 aa12.7□□□□□ -0.38
LRRC28-204ENST00000558172 PIH1D3Q9NQM4 214 aaKnown RBP12.7□□□□□ -0.38
LRRC28-204ENST00000558172 NDUFB9Q9Y6M9 179 aa12.7□□□□□ -0.38
LRRC28-204ENST00000558172 IDH1O75874 414 aaKnown RBP12.69□□□□□ -0.38
LRRC28-204ENST00000558172 RBM5P52756 815 aaKnown RBP eCLIP12.69□□□□□ -0.38
LRRC28-204ENST00000558172 MECOMQ03112 1051 aa12.69□□□□□ -0.38
LRRC28-204ENST00000558172 KIF4BQ2VIQ3 1234 aa12.69□□□□□ -0.38
LRRC28-204ENST00000558172 CFAP100Q494V2 611 aa12.69□□□□□ -0.38
LRRC28-204ENST00000558172 CNTROBQ8N137 903 aa12.69□□□□□ -0.38
LRRC28-204ENST00000558172 KBTBD3Q8NAB2 608 aa12.69□□□□□ -0.38
LRRC28-204ENST00000558172 EVI5LQ96CN4 794 aa12.69□□□□□ -0.38
LRRC28-204ENST00000558172 NMRK2Q9NPI5 230 aa12.69□□□□□ -0.38
LRRC28-204ENST00000558172 GTF3C3Q9Y5Q9 886 aa12.69□□□□□ -0.38
LRRC28-204ENST00000558172 SHTN1A0MZ66 631 aa12.68□□□□□ -0.38
LRRC28-204ENST00000558172 TRIM6-TRIM34B2RNG4 842 aa12.68□□□□□ -0.38
LRRC28-204ENST00000558172 MYO1BO43795 1136 aa12.68□□□□□ -0.38
LRRC28-204ENST00000558172 TBC1D10BQ4KMP7 808 aaPredicted RBP12.68□□□□□ -0.38
LRRC28-204ENST00000558172 RBM26Q5T8P6 1007 aaKnown RBP12.68□□□□□ -0.38
LRRC28-204ENST00000558172 NAA16Q6N069 864 aaPredicted RBP12.68□□□□□ -0.38
LRRC28-204ENST00000558172 SAMD7Q7Z3H4 446 aa12.68□□□□□ -0.38
LRRC28-204ENST00000558172 ZNF784Q8NCA9 323 aaPredicted RBP12.68□□□□□ -0.38
LRRC28-204ENST00000558172 ZC3H15Q8WU90 426 aaKnown RBP12.68□□□□□ -0.38
LRRC28-204ENST00000558172 EDC3Q96F86 508 aaKnown RBP12.68□□□□□ -0.38
LRRC28-204ENST00000558172 ZDHHC15Q96MV8 337 aa12.68□□□□□ -0.38
LRRC28-204ENST00000558172 MROH7-TTC4A0A0A0MT08 1334 aa12.67□□□□□ -0.38
LRRC28-204ENST00000558172 GAKO14976 1311 aa12.67□□□□□ -0.38
LRRC28-204ENST00000558172 ADAMTSL1Q8N6G6 1762 aa12.67□□□□□ -0.38
LRRC28-204ENST00000558172 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
LRRC28-204ENST00000558172 WNT10BO00744 389 aa12.67□□□□□ -0.38
LRRC28-204ENST00000558172 MAP4K4O95819 1239 aaPredicted RBP12.67□□□□□ -0.38
LRRC28-204ENST00000558172 ZFYP08048 801 aaPredicted RBP12.67□□□□□ -0.38
LRRC28-204ENST00000558172 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
LRRC28-204ENST00000558172 DIXDC1Q155Q3 683 aa12.67□□□□□ -0.38
LRRC28-204ENST00000558172 TTC22Q5TAA0 569 aa12.67□□□□□ -0.38
LRRC28-204ENST00000558172 SLC9C2Q5TAH2 1124 aa12.67□□□□□ -0.38
LRRC28-204ENST00000558172 ZBED3Q96IU2 234 aaPredicted RBP12.67□□□□□ -0.38
LRRC28-204ENST00000558172 NOL10Q9BSC4 688 aaKnown RBP12.67□□□□□ -0.38
LRRC28-204ENST00000558172 GPR75-ASB3A0A0A6YYF3 556 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 BAG3O95817 575 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 PDE6AP16499 860 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 CYP7A1P22680 504 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 ADD2P35612 726 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 RGS3P49796 1198 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 HIRAP54198 1017 aaPredicted RBP12.66□□□□□ -0.38
LRRC28-204ENST00000558172 UBE3CQ15386 1083 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 EAPPQ56P03 285 aaPredicted RBP12.66□□□□□ -0.38
LRRC28-204ENST00000558172 CERS3Q8IU89 383 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 MAGEB6Q8N7X4 407 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 TRPM4Q8TD43 1214 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 ZNF384Q8TF68 577 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 RILPL2Q969X0 211 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 PRMT6Q96LA8 375 aaPredicted RBP12.66□□□□□ -0.38
LRRC28-204ENST00000558172 FSD1Q9BTV5 496 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 PGAP2Q9UHJ9 254 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 DAGLAQ9Y4D2 1042 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 RFX7Q2KHR2 1363 aa12.66□□□□□ -0.38
LRRC28-204ENST00000558172 CDK5RAP2Q96SN8 1893 aa12.65□□□□□ -0.38
LRRC28-204ENST00000558172 KIF3CO14782 793 aa12.65□□□□□ -0.38
LRRC28-204ENST00000558172 RNF113AO15541 343 aaKnown RBP12.65□□□□□ -0.38
LRRC28-204ENST00000558172 EGFRP00533 1210 aa12.65□□□□□ -0.38
LRRC28-204ENST00000558172 PPP4CP60510 307 aa12.65□□□□□ -0.38
LRRC28-204ENST00000558172 NBPF9Q3BBW0 867 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms