RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 ABCF2Q9UG63 623 aa20.47■□□□□ 0.87
PBX4-202ENST00000557978 MYH7P12883 1935 aa20.46■□□□□ 0.87
PBX4-202ENST00000557978 SMARCA5O60264 1052 aaPredicted RBP20.46■□□□□ 0.87
PBX4-202ENST00000557978 CFAP100Q494V2 611 aa20.46■□□□□ 0.87
PBX4-202ENST00000557978 MAP1SQ66K74 1059 aaPredicted RBP20.46■□□□□ 0.87
PBX4-202ENST00000557978 DOCK2Q92608 1830 aa20.46■□□□□ 0.87
PBX4-202ENST00000557978 MYO1BO43795 1136 aa20.45■□□□□ 0.86
PBX4-202ENST00000557978 NBPF9Q3BBW0 867 aa20.45■□□□□ 0.86
PBX4-202ENST00000557978 CDC37L1Q7L3B6 337 aa20.45■□□□□ 0.86
PBX4-202ENST00000557978 TEKT1Q969V4 418 aa20.45■□□□□ 0.86
PBX4-202ENST00000557978 PITPNM2Q9BZ72 1349 aa20.45■□□□□ 0.86
PBX4-202ENST00000557978 AK9Q5TCS8 1911 aa20.45■□□□□ 0.86
PBX4-202ENST00000557978 PRDX5P30044 214 aa20.44■□□□□ 0.86
PBX4-202ENST00000557978 CRKP46108 304 aa20.44■□□□□ 0.86
PBX4-202ENST00000557978 GRIK5Q16478 980 aa20.44■□□□□ 0.86
PBX4-202ENST00000557978 ERICH6Q7L0X2 663 aa20.44■□□□□ 0.86
PBX4-202ENST00000557978 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.44■□□□□ 0.86
PBX4-202ENST00000557978 ZBED3Q96IU2 234 aaPredicted RBP20.44■□□□□ 0.86
PBX4-202ENST00000557978 MAST2Q6P0Q8 1798 aa20.44■□□□□ 0.86
PBX4-202ENST00000557978 IGSF3O75054 1194 aa20.44■□□□□ 0.86
PBX4-202ENST00000557978 ANKRD45Q5TZF3 282 aa20.44■□□□□ 0.86
PBX4-202ENST00000557978 HHIPL2Q6UWX4 724 aa20.44■□□□□ 0.86
PBX4-202ENST00000557978 PI16Q6UXB8 463 aa20.44■□□□□ 0.86
PBX4-202ENST00000557978 SLF2Q8IX21 1173 aa20.44■□□□□ 0.86
PBX4-202ENST00000557978 GGA3Q9NZ52 723 aa20.44■□□□□ 0.86
PBX4-202ENST00000557978 SPDYE2BA6NHP3 402 aa20.43■□□□□ 0.86
PBX4-202ENST00000557978 ITGBL1O95965 494 aaPredicted RBP20.43■□□□□ 0.86
PBX4-202ENST00000557978 SPDYE6P0CI01 402 aa20.43■□□□□ 0.86
PBX4-202ENST00000557978 ANGEL2Q5VTE6 544 aaKnown RBP20.43■□□□□ 0.86
PBX4-202ENST00000557978 DZIP1Q86YF9 867 aaKnown RBP20.43■□□□□ 0.86
PBX4-202ENST00000557978 SMC5Q8IY18 1101 aa20.43■□□□□ 0.86
PBX4-202ENST00000557978 GPATCH3Q96I76 525 aa20.43■□□□□ 0.86
PBX4-202ENST00000557978 SNRKQ9NRH2 765 aa20.43■□□□□ 0.86
PBX4-202ENST00000557978 IGHDP01880 384 aa20.42■□□□□ 0.86
PBX4-202ENST00000557978 ZAP70P43403 619 aa20.42■□□□□ 0.86
PBX4-202ENST00000557978 SULF1Q8IWU6 871 aa20.42■□□□□ 0.86
PBX4-202ENST00000557978 PRMT6Q96LA8 375 aaPredicted RBP20.42■□□□□ 0.86
PBX4-202ENST00000557978 LRP2BPQ9P2M1 347 aa20.42■□□□□ 0.86
PBX4-202ENST00000557978 CYP2E1P05181 493 aaPredicted RBP20.41■□□□□ 0.86
PBX4-202ENST00000557978 NEFLP07196 543 aa20.41■□□□□ 0.86
PBX4-202ENST00000557978 ATP5JP18859 108 aa20.41■□□□□ 0.86
PBX4-202ENST00000557978 KRT26Q7Z3Y9 468 aa20.41■□□□□ 0.86
PBX4-202ENST00000557978 ZDHHC15Q96MV8 337 aa20.41■□□□□ 0.86
PBX4-202ENST00000557978 GSTO1P78417 241 aa20.4■□□□□ 0.86
PBX4-202ENST00000557978 TTF1Q15361 905 aaPredicted RBP20.4■□□□□ 0.86
PBX4-202ENST00000557978 TBC1D9Q6ZT07 1266 aa20.4■□□□□ 0.86
PBX4-202ENST00000557978 APOBEC3FQ8IUX4 373 aaKnown RBP20.4■□□□□ 0.86
PBX4-202ENST00000557978 ECHDC1Q9NTX5 307 aa20.4■□□□□ 0.86
PBX4-202ENST00000557978 RAI14Q9P0K7 980 aa20.4■□□□□ 0.86
PBX4-202ENST00000557978 PASKQ96RG2 1323 aa20.4■□□□□ 0.86
PBX4-202ENST00000557978 LDHCP07864 332 aa20.39■□□□□ 0.85
PBX4-202ENST00000557978 GLIS2Q9BZE0 524 aaPredicted RBP20.39■□□□□ 0.85
PBX4-202ENST00000557978 ASTN2O75129 1339 aaPredicted RBP20.39■□□□□ 0.85
PBX4-202ENST00000557978 HSPA6P17066 643 aa20.38■□□□□ 0.85
PBX4-202ENST00000557978 MECOMQ03112 1051 aa20.38■□□□□ 0.85
PBX4-202ENST00000557978 USP48Q86UV5 1035 aa20.38■□□□□ 0.85
PBX4-202ENST00000557978 FAM163AQ96GL9 167 aaPredicted RBP20.38■□□□□ 0.85
PBX4-202ENST00000557978 PCDHAC2Q9Y5I4 1007 aa20.38■□□□□ 0.85
PBX4-202ENST00000557978 TTC41PQ6P2S7 1318 aa20.38■□□□□ 0.85
PBX4-202ENST00000557978 APLP1P51693 650 aa20.37■□□□□ 0.85
PBX4-202ENST00000557978 DIXDC1Q155Q3 683 aa20.37■□□□□ 0.85
PBX4-202ENST00000557978 B4GALNT3Q6L9W6 998 aa20.37■□□□□ 0.85
PBX4-202ENST00000557978 TMED8Q6PL24 325 aaPredicted RBP20.37■□□□□ 0.85
PBX4-202ENST00000557978 NSUN4Q96CB9 384 aaKnown RBP20.37■□□□□ 0.85
PBX4-202ENST00000557978 BOLA2Q9H3K6 86 aa20.37■□□□□ 0.85
PBX4-202ENST00000557978 TDRD3Q9H7E2 651 aaKnown RBP20.37■□□□□ 0.85
PBX4-202ENST00000557978 CDK5RAP2Q96SN8 1893 aa20.37■□□□□ 0.85
PBX4-202ENST00000557978 ERC2O15083 957 aa20.36■□□□□ 0.85
PBX4-202ENST00000557978 TNFAIP1Q13829 316 aa20.36■□□□□ 0.85
PBX4-202ENST00000557978 SPDYE2Q495Y8 402 aa20.36■□□□□ 0.85
PBX4-202ENST00000557978 APOBEC3HQ6NTF7 200 aaKnown RBP20.36■□□□□ 0.85
PBX4-202ENST00000557978 DNAJC2Q99543 621 aaKnown RBP20.36■□□□□ 0.85
PBX4-202ENST00000557978 TMOD2Q9NZR1 351 aa20.36■□□□□ 0.85
PBX4-202ENST00000557978 ZNF70Q9UC06 446 aaPredicted RBP20.36■□□□□ 0.85
PBX4-202ENST00000557978 DAGLAQ9Y4D2 1042 aa20.36■□□□□ 0.85
PBX4-202ENST00000557978 CLRN2A0PK11 232 aa20.36■□□□□ 0.85
PBX4-202ENST00000557978 MAP3K12Q12852 859 aa20.36■□□□□ 0.85
PBX4-202ENST00000557978 HAUS7Q99871 368 aa20.36■□□□□ 0.85
PBX4-202ENST00000557978 VEZTQ9HBM0 779 aa20.36■□□□□ 0.85
PBX4-202ENST00000557978 NDUFB9Q9Y6M9 179 aa20.36■□□□□ 0.85
PBX4-202ENST00000557978 GAKO14976 1311 aa20.35■□□□□ 0.85
PBX4-202ENST00000557978 TRAF5O00463 557 aa20.35■□□□□ 0.85
PBX4-202ENST00000557978 IDH1O75874 414 aaKnown RBP20.35■□□□□ 0.85
PBX4-202ENST00000557978 MX1P20591 662 aa20.35■□□□□ 0.85
PBX4-202ENST00000557978 TNNI2P48788 182 aa20.35■□□□□ 0.85
PBX4-202ENST00000557978 NAA16Q6N069 864 aaPredicted RBP20.35■□□□□ 0.85
PBX4-202ENST00000557978 ANTXR1Q9H6X2 564 aa20.35■□□□□ 0.85
PBX4-202ENST00000557978 PIH1D3Q9NQM4 214 aaKnown RBP20.35■□□□□ 0.85
PBX4-202ENST00000557978 PAG1Q9NWQ8 432 aa20.35■□□□□ 0.85
PBX4-202ENST00000557978 PPP2R3BQ9Y5P8 575 aa20.35■□□□□ 0.85
PBX4-202ENST00000557978 MROH7-TTC4A0A0A0MT08 1334 aa20.34■□□□□ 0.85
PBX4-202ENST00000557978 FOCADQ5VW36 1801 aa20.34■□□□□ 0.85
PBX4-202ENST00000557978 TMEM88BA6NKF7 163 aa20.34■□□□□ 0.85
PBX4-202ENST00000557978 ADM5C9JUS6 153 aa20.34■□□□□ 0.85
PBX4-202ENST00000557978 GOLIM4O00461 696 aa20.34■□□□□ 0.85
PBX4-202ENST00000557978 NUCB1Q02818 461 aa20.34■□□□□ 0.85
PBX4-202ENST00000557978 CHD1LQ86WJ1 897 aa20.34■□□□□ 0.85
PBX4-202ENST00000557978 NOL10Q9BSC4 688 aaKnown RBP20.34■□□□□ 0.85
PBX4-202ENST00000557978 LNPKQ9C0E8 428 aa20.34■□□□□ 0.85
PBX4-202ENST00000557978 FKBP1CQ5VVH2 108 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms