RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 TDRD3Q9H7E2 651 aaKnown RBP20.74■□□□□ 0.91
NEDD4-212ENST00000557845 ZNF70Q9UC06 446 aaPredicted RBP20.74■□□□□ 0.91
NEDD4-212ENST00000557845 SUGT1Q9Y2Z0 365 aa20.74■□□□□ 0.91
NEDD4-212ENST00000557845 PNMA6EA0A0J9YXQ4 647 aa20.73■□□□□ 0.91
NEDD4-212ENST00000557845 CA12O43570 354 aa20.73■□□□□ 0.91
NEDD4-212ENST00000557845 TIMM10P62072 90 aa20.73■□□□□ 0.91
NEDD4-212ENST00000557845 PRKG1Q13976 671 aa20.73■□□□□ 0.91
NEDD4-212ENST00000557845 SPDYE2Q495Y8 402 aa20.73■□□□□ 0.91
NEDD4-212ENST00000557845 ARMC9Q7Z3E5 817 aa20.73■□□□□ 0.91
NEDD4-212ENST00000557845 RASAL3Q86YV0 1011 aa20.73■□□□□ 0.91
NEDD4-212ENST00000557845 WDR66Q8TBY9 1149 aa20.73■□□□□ 0.91
NEDD4-212ENST00000557845 GNL3LQ9NVN8 582 aaKnown RBP20.73■□□□□ 0.91
NEDD4-212ENST00000557845 RLBP1P12271 317 aa20.72■□□□□ 0.91
NEDD4-212ENST00000557845 TFCP2Q12800 502 aa20.72■□□□□ 0.91
NEDD4-212ENST00000557845 TEKT1Q969V4 418 aa20.72■□□□□ 0.91
NEDD4-212ENST00000557845 TSKSQ9UJT2 592 aa20.72■□□□□ 0.91
NEDD4-212ENST00000557845 ZBTB7BO15156 539 aaPredicted RBP20.71■□□□□ 0.91
NEDD4-212ENST00000557845 RASA3Q14644 834 aa20.71■□□□□ 0.91
NEDD4-212ENST00000557845 SUPT20HL1Q3ZLR7 823 aa20.71■□□□□ 0.91
NEDD4-212ENST00000557845 ITPRIPQ8IWB1 547 aa20.71■□□□□ 0.91
NEDD4-212ENST00000557845 CSRNP1Q96S65 589 aa20.71■□□□□ 0.91
NEDD4-212ENST00000557845 ANGEL1Q9UNK9 670 aaKnown RBP20.71■□□□□ 0.91
NEDD4-212ENST00000557845 AKAP2Q9Y2D5 859 aa20.71■□□□□ 0.91
NEDD4-212ENST00000557845 ADORA1P30542 326 aa20.7■□□□□ 0.9
NEDD4-212ENST00000557845 PHKA1P46020 1223 aa20.7■□□□□ 0.9
NEDD4-212ENST00000557845 ATP8B2P98198 1209 aa20.7■□□□□ 0.9
NEDD4-212ENST00000557845 G3BP1Q13283 466 aaKnown RBP eCLIP20.7■□□□□ 0.9
NEDD4-212ENST00000557845 TNFAIP1Q13829 316 aa20.7■□□□□ 0.9
NEDD4-212ENST00000557845 LDLRAD1Q5T700 205 aa20.7■□□□□ 0.9
NEDD4-212ENST00000557845 NBPF12Q5TAG4 269 aaPredicted RBP20.7■□□□□ 0.9
NEDD4-212ENST00000557845 CCDC102BQ68D86 513 aa20.7■□□□□ 0.9
NEDD4-212ENST00000557845 ZDHHC15Q96MV8 337 aa20.7■□□□□ 0.9
NEDD4-212ENST00000557845 DENND2AQ9ULE3 1009 aa20.7■□□□□ 0.9
NEDD4-212ENST00000557845 FZD1Q9UP38 647 aa20.7■□□□□ 0.9
NEDD4-212ENST00000557845 MAST3O60307 1309 aa20.7■□□□□ 0.9
NEDD4-212ENST00000557845 A0A1B0GUL7 405 aa20.69■□□□□ 0.9
NEDD4-212ENST00000557845 SEMA3EO15041 775 aa20.69■□□□□ 0.9
NEDD4-212ENST00000557845 ZBTB22O15209 634 aa20.69■□□□□ 0.9
NEDD4-212ENST00000557845 PPP1R12BO60237 982 aaPredicted RBP20.69■□□□□ 0.9
NEDD4-212ENST00000557845 REM2Q8IYK8 340 aaPredicted RBP20.69■□□□□ 0.9
NEDD4-212ENST00000557845 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.69■□□□□ 0.9
NEDD4-212ENST00000557845 AKAP11Q9UKA4 1901 aa20.68■□□□□ 0.9
NEDD4-212ENST00000557845 TCP10L2B9ZVM9 353 aa20.68■□□□□ 0.9
NEDD4-212ENST00000557845 POLA2Q14181 598 aa20.68■□□□□ 0.9
NEDD4-212ENST00000557845 MAP3K11Q16584 847 aa20.68■□□□□ 0.9
NEDD4-212ENST00000557845 HHIPL2Q6UWX4 724 aa20.68■□□□□ 0.9
NEDD4-212ENST00000557845 XAGE2Q96GT9 111 aa20.68■□□□□ 0.9
NEDD4-212ENST00000557845 TNNI2P48788 182 aa20.67■□□□□ 0.9
NEDD4-212ENST00000557845 APOBEC3HQ6NTF7 200 aaKnown RBP20.67■□□□□ 0.9
NEDD4-212ENST00000557845 SSH3Q8TE77 659 aa20.67■□□□□ 0.9
NEDD4-212ENST00000557845 NEUROD6Q96NK8 337 aa20.67■□□□□ 0.9
NEDD4-212ENST00000557845 C1orf115Q9H7X2 142 aa20.67■□□□□ 0.9
NEDD4-212ENST00000557845 SSC5DA1L4H1 1573 aa20.67■□□□□ 0.9
NEDD4-212ENST00000557845 USP2O75604 605 aaPredicted RBP20.66■□□□□ 0.9
NEDD4-212ENST00000557845 TEPSINQ96N21 525 aa20.66■□□□□ 0.9
NEDD4-212ENST00000557845 RNF186Q9NXI6 227 aa20.66■□□□□ 0.9
NEDD4-212ENST00000557845 SALL1Q9NSC2 1324 aa20.66■□□□□ 0.9
NEDD4-212ENST00000557845 LDHBP07195 334 aaKnown RBP20.65■□□□□ 0.9
NEDD4-212ENST00000557845 PRDX5P30044 214 aa20.65■□□□□ 0.9
NEDD4-212ENST00000557845 PANK1Q8TE04 598 aa20.65■□□□□ 0.9
NEDD4-212ENST00000557845 SLC10A4Q96EP9 437 aa20.65■□□□□ 0.9
NEDD4-212ENST00000557845 SAGE1Q9NXZ1 904 aa20.65■□□□□ 0.9
NEDD4-212ENST00000557845 UNCXA6NJT0 531 aa20.64■□□□□ 0.89
NEDD4-212ENST00000557845 TRPA1O75762 1119 aa20.64■□□□□ 0.89
NEDD4-212ENST00000557845 MS4A1P11836 297 aa20.64■□□□□ 0.89
NEDD4-212ENST00000557845 CACNB3P54284 484 aa20.64■□□□□ 0.89
NEDD4-212ENST00000557845 RASGRF1Q13972 1273 aa20.64■□□□□ 0.89
NEDD4-212ENST00000557845 MVPQ14764 893 aaKnown RBP20.64■□□□□ 0.89
NEDD4-212ENST00000557845 TMEM39BQ9GZU3 492 aa20.64■□□□□ 0.89
NEDD4-212ENST00000557845 SURF6O75683 361 aaKnown RBP20.63■□□□□ 0.89
NEDD4-212ENST00000557845 IREB2P48200 963 aaKnown RBP20.63■□□□□ 0.89
NEDD4-212ENST00000557845 TM4SF4P48230 202 aa20.63■□□□□ 0.89
NEDD4-212ENST00000557845 MKRN3Q13064 507 aaKnown RBP20.63■□□□□ 0.89
NEDD4-212ENST00000557845 CDAN1Q8IWY9 1227 aa20.63■□□□□ 0.89
NEDD4-212ENST00000557845 ZGPATQ8N5A5 531 aaKnown RBP20.63■□□□□ 0.89
NEDD4-212ENST00000557845 TMOD2Q9NZR1 351 aa20.63■□□□□ 0.89
NEDD4-212ENST00000557845 CASP8AP2Q9UKL3 1982 aa20.63■□□□□ 0.89
NEDD4-212ENST00000557845 PDS5AQ29RF7 1337 aaKnown RBP20.62■□□□□ 0.89
NEDD4-212ENST00000557845 DIXDC1Q155Q3 683 aa20.62■□□□□ 0.89
NEDD4-212ENST00000557845 GORABQ5T7V8 394 aa20.62■□□□□ 0.89
NEDD4-212ENST00000557845 FKBP1CQ5VVH2 108 aa20.62■□□□□ 0.89
NEDD4-212ENST00000557845 SPRYD7Q5W111 196 aa20.62■□□□□ 0.89
NEDD4-212ENST00000557845 FAM83AQ86UY5 434 aa20.62■□□□□ 0.89
NEDD4-212ENST00000557845 CLMNQ96JQ2 1002 aa20.62■□□□□ 0.89
NEDD4-212ENST00000557845 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.62■□□□□ 0.89
NEDD4-212ENST00000557845 RCAN3Q9UKA8 241 aa20.62■□□□□ 0.89
NEDD4-212ENST00000557845 DAGLAQ9Y4D2 1042 aa20.62■□□□□ 0.89
NEDD4-212ENST00000557845 GPR108Q9NPR9 543 aa20.61■□□□□ 0.89
NEDD4-212ENST00000557845 NOP58Q9Y2X3 529 aaKnown RBP20.61■□□□□ 0.89
NEDD4-212ENST00000557845 OS9Q13438 667 aaPredicted RBP20.6■□□□□ 0.89
NEDD4-212ENST00000557845 CDC42EP5Q6NZY7 148 aa20.6■□□□□ 0.89
NEDD4-212ENST00000557845 ANKRD13AQ8IZ07 590 aa20.6■□□□□ 0.89
NEDD4-212ENST00000557845 ABCF2Q9UG63 623 aa20.6■□□□□ 0.89
NEDD4-212ENST00000557845 MYH2Q9UKX2 1941 aa20.6■□□□□ 0.89
NEDD4-212ENST00000557845 CAPN15O75808 1086 aa20.59■□□□□ 0.89
NEDD4-212ENST00000557845 SPTY2D1Q68D10 685 aaPredicted RBP20.59■□□□□ 0.89
NEDD4-212ENST00000557845 CEP85Q6P2H3 762 aa20.59■□□□□ 0.89
NEDD4-212ENST00000557845 HMG20BQ9P0W2 317 aa20.59■□□□□ 0.89
NEDD4-212ENST00000557845 ZBTB48P10074 688 aaPredicted RBP20.58■□□□□ 0.89
NEDD4-212ENST00000557845 ARID4AP29374 1257 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms