RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 TRIP4Q15650 581 aaPredicted RBP7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 IER5Q5VY09 327 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 PDE12Q6L8Q7 609 aaKnown RBP7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 ERMP1Q7Z2K6 904 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 TRERF1Q96PN7 1200 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 BCO2Q9BYV7 579 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 SRCIN1Q9C0H9 1055 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 RUBCNLQ9H714 662 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 NEUROD4Q9HD90 331 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 TMEM63CQ9P1W3 806 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 TBX22Q9Y458 520 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 CUL9Q8IWT3 2517 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 ZMYM3Q14202 1370 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 LRRC9Q6ZRR7 1453 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 SHPRHQ149N8 1683 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 KCNQ2O43526 872 aa7.02□□□□□ -1.29
MTHFD1-216ENST00000557539 MX2P20592 715 aa7.02□□□□□ -1.29
MTHFD1-216ENST00000557539 INPP5BP32019 993 aa7.02□□□□□ -1.29
MTHFD1-216ENST00000557539 MAP3K10Q02779 954 aa7.02□□□□□ -1.29
MTHFD1-216ENST00000557539 KBTBD4Q9NVX7 518 aa7.02□□□□□ -1.29
MTHFD1-216ENST00000557539 ZDHHC3Q9NYG2 299 aa7.02□□□□□ -1.29
MTHFD1-216ENST00000557539 ANKIB1Q9P2G1 1089 aa7.02□□□□□ -1.29
MTHFD1-216ENST00000557539 USP21Q9UK80 565 aa7.02□□□□□ -1.29
MTHFD1-216ENST00000557539 SBNO2Q9Y2G9 1366 aa7.01□□□□□ -1.29
MTHFD1-216ENST00000557539 BCRP11274 1271 aa7.01□□□□□ -1.29
MTHFD1-216ENST00000557539 BTLAQ7Z6A9 289 aa7.01□□□□□ -1.29
MTHFD1-216ENST00000557539 TTF2Q9UNY4 1162 aaKnown RBP7.01□□□□□ -1.29
MTHFD1-216ENST00000557539 KCNMB2Q9Y691 235 aa7.01□□□□□ -1.29
MTHFD1-216ENST00000557539 XIRP1Q702N8 1843 aaKnown RBP7.01□□□□□ -1.29
MTHFD1-216ENST00000557539 SHANK3Q9BYB0 1731 aa7.01□□□□□ -1.29
MTHFD1-216ENST00000557539 DNMT1P26358 1616 aaKnown RBP7.01□□□□□ -1.29
MTHFD1-216ENST00000557539 USP19O94966 1318 aa7.01□□□□□ -1.29
MTHFD1-216ENST00000557539 CNTNAP5Q8WYK1 1306 aa7.01□□□□□ -1.29
MTHFD1-216ENST00000557539 A2ML1A8K2U0 1454 aa7□□□□□ -1.29
MTHFD1-216ENST00000557539 EREGO14944 169 aa7□□□□□ -1.29
MTHFD1-216ENST00000557539 SSBP05455 408 aaKnown RBP eCLIP7□□□□□ -1.29
MTHFD1-216ENST00000557539 GRM2Q14416 872 aa7□□□□□ -1.29
MTHFD1-216ENST00000557539 ZNF746Q6NUN9 644 aaPredicted RBP7□□□□□ -1.29
MTHFD1-216ENST00000557539 C1orf229Q6ZS94 237 aaPredicted RBP7□□□□□ -1.29
MTHFD1-216ENST00000557539 GALNT12Q8IXK2 581 aa7□□□□□ -1.29
MTHFD1-216ENST00000557539 CKAP2LQ8IYA6 745 aa7□□□□□ -1.29
MTHFD1-216ENST00000557539 NLGN1Q8N2Q7 840 aa7□□□□□ -1.29
MTHFD1-216ENST00000557539 SCARF2Q96GP6 870 aaPredicted RBP7□□□□□ -1.29
MTHFD1-216ENST00000557539 SPON2Q9BUD6 331 aa7□□□□□ -1.29
MTHFD1-216ENST00000557539 NDFIP2Q9NV92 336 aa7□□□□□ -1.29
MTHFD1-216ENST00000557539 GPC6Q9Y625 555 aaPredicted RBP7□□□□□ -1.29
MTHFD1-216ENST00000557539 KIAA1210Q9ULL0 1709 aa6.99□□□□□ -1.29
MTHFD1-216ENST00000557539 F6X3S4 739 aa6.99□□□□□ -1.29
MTHFD1-216ENST00000557539 LBRQ14739 615 aaKnown RBP6.99□□□□□ -1.29
MTHFD1-216ENST00000557539 EGFLAMQ63HQ2 1017 aa6.99□□□□□ -1.29
MTHFD1-216ENST00000557539 LRRC69Q6ZNQ3 347 aa6.99□□□□□ -1.29
MTHFD1-216ENST00000557539 JAZF1Q86VZ6 243 aa6.99□□□□□ -1.29
MTHFD1-216ENST00000557539 C1orf127Q8N9H9 656 aa6.99□□□□□ -1.29
MTHFD1-216ENST00000557539 MRFAP1L1Q96HT8 127 aa6.99□□□□□ -1.29
MTHFD1-216ENST00000557539 CHRDQ9H2X0 955 aa6.99□□□□□ -1.29
MTHFD1-216ENST00000557539 SUV39H2Q9H5I1 410 aa6.99□□□□□ -1.29
MTHFD1-216ENST00000557539 ENAMQ9NRM1 1142 aa6.99□□□□□ -1.29
MTHFD1-216ENST00000557539 CNTN3Q9P232 1028 aa6.99□□□□□ -1.29
MTHFD1-216ENST00000557539 MED14O60244 1454 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 RALGAPBQ86X10 1494 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 DISP1Q96F81 1524 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 KDM5DQ9BY66 1539 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 MINDY4BA8MYZ0 360 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 C2CD2LO14523 706 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 OIP5O43482 229 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 HSPA1AP0DMV8 641 aaKnown RBP6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 HSPA1BP0DMV9 641 aaKnown RBP6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 ATP4AP20648 1035 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 GSTT1P30711 240 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 NFE2L2Q16236 605 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 ARSJQ5FYB0 599 aaPredicted RBP6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 KANK3Q6NY19 840 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 KIAA0825Q8IV33 1275 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 RASGRP4Q8TDF6 673 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 CRISPLD1Q9H336 500 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 PPP4R2Q9NY27 417 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 HCN2Q9UL51 889 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 WRNQ14191 1432 aaPredicted RBP eCLIP6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 A0A0C4DFX4 3053 aa6.98□□□□□ -1.29
MTHFD1-216ENST00000557539 TMEM94Q12767 1356 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 TNRC18O15417 2968 aaPredicted RBP6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 AGLP35573 1532 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 ADGBQ8N7X0 1667 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 K7ELQ4 463 aaPredicted RBP6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 BNIP3LO60238 219 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 XYLBO75191 536 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 EPB42P16452 691 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 MAP2K3P46734 347 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 RGS19P49795 217 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 TCEAL1Q15170 157 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 CCDC85BQ15834 202 aaPredicted RBP6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 PDE4DIPQ5VU43 2346 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 RELL1Q8IUW5 271 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 PGBD3Q8N328 593 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 ABHD17AQ96GS6 310 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 SEC16BQ96JE7 1060 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 ZIC5Q96T25 663 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 RSRP1Q9BUV0 290 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms