RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 DOK7Q18PE1 504 aa17.33■□□□□ 0.36
ARHGEF40-208ENST00000557498 DCAF8Q5TAQ9 597 aa17.33■□□□□ 0.36
ARHGEF40-208ENST00000557498 VPS53Q5VIR6 699 aa17.33■□□□□ 0.36
ARHGEF40-208ENST00000557498 CREB3L3Q68CJ9 461 aa17.33■□□□□ 0.36
ARHGEF40-208ENST00000557498 AIDAQ96BJ3 306 aa17.33■□□□□ 0.36
ARHGEF40-208ENST00000557498 PSMD1Q99460 953 aa17.33■□□□□ 0.36
ARHGEF40-208ENST00000557498 SNX14Q9Y5W7 946 aa17.33■□□□□ 0.36
ARHGEF40-208ENST00000557498 ZNF646O15015 1829 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF40-208ENST00000557498 SLC27A2O14975 620 aa17.32■□□□□ 0.36
ARHGEF40-208ENST00000557498 MBD4O95243 580 aa17.32■□□□□ 0.36
ARHGEF40-208ENST00000557498 KIAA2012Q0VF49 1180 aa17.32■□□□□ 0.36
ARHGEF40-208ENST00000557498 RNF20Q5VTR2 975 aa17.32■□□□□ 0.36
ARHGEF40-208ENST00000557498 DZIP1Q86YF9 867 aaKnown RBP17.32■□□□□ 0.36
ARHGEF40-208ENST00000557498 ZNF384Q8TF68 577 aa17.32■□□□□ 0.36
ARHGEF40-208ENST00000557498 STRBPQ96SI9 672 aaKnown RBP17.32■□□□□ 0.36
ARHGEF40-208ENST00000557498 FER1L6Q2WGJ9 1857 aa17.31■□□□□ 0.36
ARHGEF40-208ENST00000557498 FOXP2O15409 715 aa17.31■□□□□ 0.36
ARHGEF40-208ENST00000557498 GTF2IP78347 998 aa17.31■□□□□ 0.36
ARHGEF40-208ENST00000557498 AOC3Q16853 763 aa17.31■□□□□ 0.36
ARHGEF40-208ENST00000557498 MFSD14BQ5SR56 506 aa17.31■□□□□ 0.36
ARHGEF40-208ENST00000557498 PODNQ7Z5L7 613 aa17.31■□□□□ 0.36
ARHGEF40-208ENST00000557498 ADGRA1Q86SQ6 560 aa17.31■□□□□ 0.36
ARHGEF40-208ENST00000557498 RASEFQ8IZ41 740 aa17.31■□□□□ 0.36
ARHGEF40-208ENST00000557498 DBNDD1Q9H9R9 158 aa17.31■□□□□ 0.36
ARHGEF40-208ENST00000557498 ARFGEF1Q9Y6D6 1849 aa17.31■□□□□ 0.36
ARHGEF40-208ENST00000557498 MAGEB6P1A0A0J9YX57 407 aa17.3■□□□□ 0.36
ARHGEF40-208ENST00000557498 PPIP5K2O43314 1243 aa17.3■□□□□ 0.36
ARHGEF40-208ENST00000557498 ECE2O60344 883 aa17.3■□□□□ 0.36
ARHGEF40-208ENST00000557498 ZKSCAN1P17029 563 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF40-208ENST00000557498 GSTO1P78417 241 aa17.3■□□□□ 0.36
ARHGEF40-208ENST00000557498 BECN1Q14457 450 aa17.3■□□□□ 0.36
ARHGEF40-208ENST00000557498 GRIK5Q16478 980 aa17.3■□□□□ 0.36
ARHGEF40-208ENST00000557498 LCORLQ8N3X6 602 aa17.3■□□□□ 0.36
ARHGEF40-208ENST00000557498 MIGA1Q8NAN2 632 aa17.3■□□□□ 0.36
ARHGEF40-208ENST00000557498 SNX21Q969T3 373 aa17.3■□□□□ 0.36
ARHGEF40-208ENST00000557498 ARMT1Q9H993 441 aa17.3■□□□□ 0.36
ARHGEF40-208ENST00000557498 PSME4Q14997 1843 aa17.3■□□□□ 0.36
ARHGEF40-208ENST00000557498 LAMA4Q16363 1823 aa17.3■□□□□ 0.36
ARHGEF40-208ENST00000557498 GNAT2P19087 354 aa17.29■□□□□ 0.36
ARHGEF40-208ENST00000557498 FBXW7Q969H0 707 aa17.29■□□□□ 0.36
ARHGEF40-208ENST00000557498 RIOK1Q9BRS2 568 aaKnown RBP17.29■□□□□ 0.36
ARHGEF40-208ENST00000557498 VPS33BQ9H267 617 aa17.29■□□□□ 0.36
ARHGEF40-208ENST00000557498 CTNNA3Q9UI47 895 aa17.29■□□□□ 0.36
ARHGEF40-208ENST00000557498 SUGT1Q9Y2Z0 365 aa17.29■□□□□ 0.36
ARHGEF40-208ENST00000557498 SCN9AQ15858 1988 aa17.29■□□□□ 0.36
ARHGEF40-208ENST00000557498 RPAP1Q9BWH6 1393 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF40-208ENST00000557498 ZMYM6O95789 1325 aa17.28■□□□□ 0.36
ARHGEF40-208ENST00000557498 MYH2Q9UKX2 1941 aa17.28■□□□□ 0.36
ARHGEF40-208ENST00000557498 TSGA10IPQ3SY00 556 aa17.28■□□□□ 0.36
ARHGEF40-208ENST00000557498 NLGN2Q8NFZ4 835 aa17.28■□□□□ 0.36
ARHGEF40-208ENST00000557498 LDHCP07864 332 aa17.27■□□□□ 0.36
ARHGEF40-208ENST00000557498 FKBP1AP62942 108 aaKnown RBP17.27■□□□□ 0.36
ARHGEF40-208ENST00000557498 TTLL5Q6EMB2 1281 aa17.27■□□□□ 0.36
ARHGEF40-208ENST00000557498 HSCBQ8IWL3 235 aa17.27■□□□□ 0.36
ARHGEF40-208ENST00000557498 IL27Q8NEV9 243 aa17.27■□□□□ 0.36
ARHGEF40-208ENST00000557498 TBC1D2Q9BYX2 928 aa17.27■□□□□ 0.36
ARHGEF40-208ENST00000557498 TM6SF1Q9BZW5 370 aa17.27■□□□□ 0.36
ARHGEF40-208ENST00000557498 BCS1LQ9Y276 419 aa17.27■□□□□ 0.36
ARHGEF40-208ENST00000557498 SLC4A4Q9Y6R1 1079 aa17.27■□□□□ 0.36
ARHGEF40-208ENST00000557498 MROH7-TTC4A0A0A0MT08 1334 aa17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 PATL2C9JE40 543 aaKnown RBP17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 ST18O60284 1047 aa17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 FGAP02671 866 aa17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 APPP05067 770 aa17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 CYP21A2P08686 494 aa17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 DYNLL1P63167 89 aaKnown RBP17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 KRT32Q14532 448 aa17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 ALX1Q15699 326 aa17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 STRIP1Q5VSL9 837 aa17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 CERS5Q8N5B7 392 aa17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 JAKMIP1Q96N16 626 aaKnown RBP17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 TAOK3Q9H2K8 898 aa17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 EPB41L4AQ9HCS5 686 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 ZNF277Q9NRM2 450 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 COL4A5P29400 1685 aa17.26■□□□□ 0.35
ARHGEF40-208ENST00000557498 USP17L3A6NCW0 530 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 USP17L4A6NCW7 530 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 GSG1L2A8MUP6 293 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 PRKAB2O43741 272 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 PSMA5P28066 241 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 IARSP41252 1262 aaKnown RBP17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 DIXDC1Q155Q3 683 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 IMMTQ16891 758 aaKnown RBP17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 ADCK5Q3MIX3 580 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 DACT2Q5SW24 774 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 USP17L1Q7RTZ2 530 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 SLF2Q8IX21 1173 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 IFNL3Q8IZI9 196 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 LARGE2Q8N3Y3 721 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 NACAP1Q9BZK3 213 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 AATFQ9NY61 560 aaKnown RBP eCLIP17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 TAF6LQ9Y6J9 622 aa17.25■□□□□ 0.35
ARHGEF40-208ENST00000557498 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
ARHGEF40-208ENST00000557498 LTBP3Q9NS15 1303 aa17.24■□□□□ 0.35
ARHGEF40-208ENST00000557498 YDJCA8MPS7 323 aa17.24■□□□□ 0.35
ARHGEF40-208ENST00000557498 NFKBIEO00221 500 aa17.24■□□□□ 0.35
ARHGEF40-208ENST00000557498 CD2BP2O95400 341 aaKnown RBP17.24■□□□□ 0.35
ARHGEF40-208ENST00000557498 NEK4P51957 841 aa17.24■□□□□ 0.35
ARHGEF40-208ENST00000557498 NOL10Q9BSC4 688 aaKnown RBP17.24■□□□□ 0.35
ARHGEF40-208ENST00000557498 MXD3Q9BW11 206 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms