RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 MAPK8IP2Q13387 824 aaPredicted RBP12.79□□□□□ -0.36
RDH11-209ENST00000557273 RABL6Q3YEC7 729 aaPredicted RBP12.79□□□□□ -0.36
RDH11-209ENST00000557273 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.79□□□□□ -0.36
RDH11-209ENST00000557273 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.79□□□□□ -0.36
RDH11-209ENST00000557273 OPTNQ96CV9 577 aa12.79□□□□□ -0.36
RDH11-209ENST00000557273 MRIQ9BWK5 157 aa12.79□□□□□ -0.36
RDH11-209ENST00000557273 SRCIN1Q9C0H9 1055 aa12.79□□□□□ -0.36
RDH11-209ENST00000557273 TDRD3Q9H7E2 651 aaKnown RBP12.79□□□□□ -0.36
RDH11-209ENST00000557273 EFCC1Q9HA90 598 aa12.79□□□□□ -0.36
RDH11-209ENST00000557273 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
RDH11-209ENST00000557273 RIPOR2Q9Y4F9 1068 aa12.79□□□□□ -0.36
RDH11-209ENST00000557273 MYH13Q9UKX3 1938 aa12.78□□□□□ -0.36
RDH11-209ENST00000557273 POTEFA5A3E0 1075 aa12.78□□□□□ -0.36
RDH11-209ENST00000557273 PLIN1O60240 522 aa12.78□□□□□ -0.36
RDH11-209ENST00000557273 CRKP46108 304 aa12.78□□□□□ -0.36
RDH11-209ENST00000557273 TNNI2P48788 182 aa12.78□□□□□ -0.36
RDH11-209ENST00000557273 FBXO33Q7Z6M2 555 aa12.78□□□□□ -0.36
RDH11-209ENST00000557273 CD99L2Q8TCZ2 262 aa12.78□□□□□ -0.36
RDH11-209ENST00000557273 TBC1D22AQ8WUA7 517 aa12.78□□□□□ -0.36
RDH11-209ENST00000557273 KIF16BQ96L93 1317 aa12.78□□□□□ -0.36
RDH11-209ENST00000557273 RPAP1Q9BWH6 1393 aaPredicted RBP12.78□□□□□ -0.36
RDH11-209ENST00000557273 GTF2A2P52657 109 aa12.77□□□□□ -0.37
RDH11-209ENST00000557273 MAP3K9P80192 1104 aa12.77□□□□□ -0.37
RDH11-209ENST00000557273 CAP1Q01518 475 aa12.77□□□□□ -0.37
RDH11-209ENST00000557273 VGLL4Q14135 290 aa12.77□□□□□ -0.37
RDH11-209ENST00000557273 FKBP1CQ5VVH2 108 aa12.77□□□□□ -0.37
RDH11-209ENST00000557273 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
RDH11-209ENST00000557273 VGLL2Q8N8G2 317 aa12.77□□□□□ -0.37
RDH11-209ENST00000557273 BRI3BPQ8WY22 251 aa12.77□□□□□ -0.37
RDH11-209ENST00000557273 SUCLG2Q96I99 432 aa12.77□□□□□ -0.37
RDH11-209ENST00000557273 PUS3Q9BZE2 481 aaKnown RBP12.77□□□□□ -0.37
RDH11-209ENST00000557273 ELP3Q9H9T3 547 aa12.77□□□□□ -0.37
RDH11-209ENST00000557273 ZCCHC17Q9NP64 241 aaKnown RBP12.77□□□□□ -0.37
RDH11-209ENST00000557273 SPDYE5A6NIY4 337 aa12.76□□□□□ -0.37
RDH11-209ENST00000557273 NBPF7P0C2Y1 421 aaPredicted RBP12.76□□□□□ -0.37
RDH11-209ENST00000557273 ARHGEF6Q15052 776 aa12.76□□□□□ -0.37
RDH11-209ENST00000557273 FAM83AQ86UY5 434 aa12.76□□□□□ -0.37
RDH11-209ENST00000557273 ZNF333Q96JL9 665 aa12.76□□□□□ -0.37
RDH11-209ENST00000557273 ZDHHC15Q96MV8 337 aa12.76□□□□□ -0.37
RDH11-209ENST00000557273 TMEM39BQ9GZU3 492 aa12.76□□□□□ -0.37
RDH11-209ENST00000557273 ZFYVE28Q9HCC9 887 aa12.76□□□□□ -0.37
RDH11-209ENST00000557273 SUGT1Q9Y2Z0 365 aa12.76□□□□□ -0.37
RDH11-209ENST00000557273 CSADQ9Y600 493 aa12.76□□□□□ -0.37
RDH11-209ENST00000557273 CCL15-CCL14A0A0B4J2E2 113 aa12.75□□□□□ -0.37
RDH11-209ENST00000557273 TCP10L2B9ZVM9 353 aa12.75□□□□□ -0.37
RDH11-209ENST00000557273 MAST3O60307 1309 aa12.75□□□□□ -0.37
RDH11-209ENST00000557273 PDE8BO95263 885 aa12.75□□□□□ -0.37
RDH11-209ENST00000557273 TAF1CQ15572 869 aaPredicted RBP12.75□□□□□ -0.37
RDH11-209ENST00000557273 CCL15Q16663 113 aa12.75□□□□□ -0.37
RDH11-209ENST00000557273 SLC4A10Q6U841 1118 aa12.75□□□□□ -0.37
RDH11-209ENST00000557273 TEKT1Q969V4 418 aa12.75□□□□□ -0.37
RDH11-209ENST00000557273 CEP290O15078 2479 aa12.74□□□□□ -0.37
RDH11-209ENST00000557273 ZNF521Q96K83 1311 aa12.74□□□□□ -0.37
RDH11-209ENST00000557273 GRIK5Q16478 980 aa12.74□□□□□ -0.37
RDH11-209ENST00000557273 CAVIN4Q5BKX8 364 aa12.74□□□□□ -0.37
RDH11-209ENST00000557273 VPS37DQ86XT2 251 aa12.74□□□□□ -0.37
RDH11-209ENST00000557273 ERO1BQ86YB8 467 aa12.74□□□□□ -0.37
RDH11-209ENST00000557273 ANKRD44Q8N8A2 993 aa12.74□□□□□ -0.37
RDH11-209ENST00000557273 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
RDH11-209ENST00000557273 HOOK2Q96ED9 719 aa12.74□□□□□ -0.37
RDH11-209ENST00000557273 BICC1Q9H694 974 aaKnown RBP12.74□□□□□ -0.37
RDH11-209ENST00000557273 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.74□□□□□ -0.37
RDH11-209ENST00000557273 SALL2Q9Y467 1007 aaPredicted RBP12.74□□□□□ -0.37
RDH11-209ENST00000557273 SNCAIPQ9Y6H5 919 aa12.74□□□□□ -0.37
RDH11-209ENST00000557273 PTPRCP08575 1304 aa12.73□□□□□ -0.37
RDH11-209ENST00000557273 TLR2O60603 784 aa12.73□□□□□ -0.37
RDH11-209ENST00000557273 GNRH1P01148 92 aa12.73□□□□□ -0.37
RDH11-209ENST00000557273 CETPP11597 493 aa12.73□□□□□ -0.37
RDH11-209ENST00000557273 HABP4Q5JVS0 413 aaKnown RBP12.73□□□□□ -0.37
RDH11-209ENST00000557273 APOBEC3HQ6NTF7 200 aaKnown RBP12.73□□□□□ -0.37
RDH11-209ENST00000557273 HHIPL2Q6UWX4 724 aa12.73□□□□□ -0.37
RDH11-209ENST00000557273 NBPF11Q86T75 865 aa12.73□□□□□ -0.37
RDH11-209ENST00000557273 FAM43AQ8N2R8 423 aa12.73□□□□□ -0.37
RDH11-209ENST00000557273 OTUD5Q96G74 571 aa12.73□□□□□ -0.37
RDH11-209ENST00000557273 ZSWIM8A7E2V4 1837 aa12.73□□□□□ -0.37
RDH11-209ENST00000557273 ANP32CO43423 234 aa12.72□□□□□ -0.37
RDH11-209ENST00000557273 WDHD1O75717 1129 aaPredicted RBP12.72□□□□□ -0.37
RDH11-209ENST00000557273 EN2P19622 333 aaPredicted RBP12.72□□□□□ -0.37
RDH11-209ENST00000557273 FGFR2P21802 821 aa12.72□□□□□ -0.37
RDH11-209ENST00000557273 PRMT2P55345 433 aa12.72□□□□□ -0.37
RDH11-209ENST00000557273 PPIL2Q13356 520 aa12.72□□□□□ -0.37
RDH11-209ENST00000557273 LRRC24Q50LG9 513 aa12.72□□□□□ -0.37
RDH11-209ENST00000557273 METTL24Q5JXM2 366 aa12.72□□□□□ -0.37
RDH11-209ENST00000557273 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
RDH11-209ENST00000557273 TMOD2Q9NZR1 351 aa12.72□□□□□ -0.37
RDH11-209ENST00000557273 PTCH2Q9Y6C5 1203 aa12.72□□□□□ -0.37
RDH11-209ENST00000557273 LACTBP83111 547 aaPredicted RBP12.71□□□□□ -0.37
RDH11-209ENST00000557273 PPATQ06203 517 aa12.71□□□□□ -0.37
RDH11-209ENST00000557273 CHAF1AQ13111 956 aaPredicted RBP12.71□□□□□ -0.37
RDH11-209ENST00000557273 SNAPC2Q13487 334 aa12.71□□□□□ -0.37
RDH11-209ENST00000557273 PUM3Q15397 648 aaKnown RBP12.71□□□□□ -0.37
RDH11-209ENST00000557273 SLC9C1Q4G0N8 1177 aa12.71□□□□□ -0.37
RDH11-209ENST00000557273 DCAF15Q66K64 600 aa12.71□□□□□ -0.37
RDH11-209ENST00000557273 WRNIP1Q96S55 665 aa12.71□□□□□ -0.37
RDH11-209ENST00000557273 IQSEC3Q9UPP2 1182 aaPredicted RBP12.71□□□□□ -0.37
RDH11-209ENST00000557273 AK9Q5TCS8 1911 aa12.7□□□□□ -0.38
RDH11-209ENST00000557273 BTBD19C9JJ37 291 aa12.7□□□□□ -0.38
RDH11-209ENST00000557273 IRF6O14896 467 aa12.7□□□□□ -0.38
RDH11-209ENST00000557273 ZBTB22O15209 634 aa12.7□□□□□ -0.38
RDH11-209ENST00000557273 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms