RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 MFSD14BQ5SR56 506 aa13.54□□□□□ -0.24
HNRNPC-230ENST00000557201 FBXO33Q7Z6M2 555 aa13.54□□□□□ -0.24
HNRNPC-230ENST00000557201 VEZTQ9HBM0 779 aa13.54□□□□□ -0.24
HNRNPC-230ENST00000557201 ZNF70Q9UC06 446 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-230ENST00000557201 PDE4DIPQ5VU43 2346 aa13.54□□□□□ -0.24
HNRNPC-230ENST00000557201 ARAP2Q8WZ64 1704 aa13.53□□□□□ -0.24
HNRNPC-230ENST00000557201 GRIK5Q16478 980 aa13.53□□□□□ -0.24
HNRNPC-230ENST00000557201 SLC4A10Q6U841 1118 aa13.53□□□□□ -0.24
HNRNPC-230ENST00000557201 CDAN1Q8IWY9 1227 aa13.53□□□□□ -0.24
HNRNPC-230ENST00000557201 VGLL2Q8N8G2 317 aa13.53□□□□□ -0.24
HNRNPC-230ENST00000557201 PTPN18Q99952 460 aa13.53□□□□□ -0.24
HNRNPC-230ENST00000557201 TTF2Q9UNY4 1162 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-230ENST00000557201 IREB2P48200 963 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-230ENST00000557201 RBM5P52756 815 aaKnown RBP eCLIP13.52□□□□□ -0.255e-14■■□□□ 12.8
HNRNPC-230ENST00000557201 PRPF38BQ5VTL8 546 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-230ENST00000557201 OTOP1Q7RTM1 612 aa13.52□□□□□ -0.25
HNRNPC-230ENST00000557201 DZIP1LQ8IYY4 767 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-230ENST00000557201 ANKRD13AQ8IZ07 590 aa13.52□□□□□ -0.25
HNRNPC-230ENST00000557201 ANKRD44Q8N8A2 993 aa13.52□□□□□ -0.25
HNRNPC-230ENST00000557201 BICC1Q9H694 974 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-230ENST00000557201 TDRD3Q9H7E2 651 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-230ENST00000557201 MROH5Q6ZUA9 1318 aa13.52□□□□□ -0.25
HNRNPC-230ENST00000557201 OTOFQ9HC10 1997 aa13.51□□□□□ -0.25
HNRNPC-230ENST00000557201 CAP1Q01518 475 aa13.51□□□□□ -0.25
HNRNPC-230ENST00000557201 CRHR2Q13324 411 aa13.51□□□□□ -0.25
HNRNPC-230ENST00000557201 TNFAIP1Q13829 316 aa13.51□□□□□ -0.25
HNRNPC-230ENST00000557201 LRRC24Q50LG9 513 aa13.51□□□□□ -0.25
HNRNPC-230ENST00000557201 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.51□□□□□ -0.25
HNRNPC-230ENST00000557201 MRPL50Q8N5N7 158 aaKnown RBP13.51□□□□□ -0.25
HNRNPC-230ENST00000557201 MS4A4AQ96JQ5 239 aa13.51□□□□□ -0.25
HNRNPC-230ENST00000557201 MKI67P46013 3256 aaKnown RBP13.5□□□□□ -0.25
HNRNPC-230ENST00000557201 CRKP46108 304 aa13.5□□□□□ -0.25
HNRNPC-230ENST00000557201 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
HNRNPC-230ENST00000557201 TRIM17Q9Y577 477 aa13.5□□□□□ -0.25
HNRNPC-230ENST00000557201 CENPFP49454 3210 aa13.5□□□□□ -0.25
HNRNPC-230ENST00000557201 BRCA2P51587 3418 aa13.49□□□□□ -0.25
HNRNPC-230ENST00000557201 HDLBPQ00341 1268 aaKnown RBP13.49□□□□□ -0.25
HNRNPC-230ENST00000557201 OPTNQ96CV9 577 aa13.49□□□□□ -0.25
HNRNPC-230ENST00000557201 MRIQ9BWK5 157 aa13.49□□□□□ -0.25
HNRNPC-230ENST00000557201 TMEM39BQ9GZU3 492 aa13.49□□□□□ -0.25
HNRNPC-230ENST00000557201 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.49□□□□□ -0.25
HNRNPC-230ENST00000557201 TCP10L2B9ZVM9 353 aa13.48□□□□□ -0.25
HNRNPC-230ENST00000557201 PDE8BO95263 885 aa13.48□□□□□ -0.25
HNRNPC-230ENST00000557201 FGFR2P21802 821 aa13.48□□□□□ -0.25
HNRNPC-230ENST00000557201 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.48□□□□□ -0.252e-14■□□□□ 9.1
HNRNPC-230ENST00000557201 ERO1AQ96HE7 468 aa13.48□□□□□ -0.25
HNRNPC-230ENST00000557201 ELP3Q9H9T3 547 aa13.48□□□□□ -0.25
HNRNPC-230ENST00000557201 PTPN22Q9Y2R2 807 aa13.48□□□□□ -0.25
HNRNPC-230ENST00000557201 KIF16BQ96L93 1317 aa13.47□□□□□ -0.25
HNRNPC-230ENST00000557201 MAP3K9P80192 1104 aa13.47□□□□□ -0.25
HNRNPC-230ENST00000557201 VGLL4Q14135 290 aa13.47□□□□□ -0.25
HNRNPC-230ENST00000557201 OTUD7BQ6GQQ9 843 aa13.47□□□□□ -0.25
HNRNPC-230ENST00000557201 CD99L2Q8TCZ2 262 aa13.47□□□□□ -0.25
HNRNPC-230ENST00000557201 TBC1D22AQ8WUA7 517 aa13.47□□□□□ -0.25
HNRNPC-230ENST00000557201 BRI3BPQ8WY22 251 aa13.47□□□□□ -0.25
HNRNPC-230ENST00000557201 ZDHHC15Q96MV8 337 aa13.47□□□□□ -0.25
HNRNPC-230ENST00000557201 USP44Q9H0E7 712 aa13.47□□□□□ -0.25
HNRNPC-230ENST00000557201 PCDH10Q9P2E7 1040 aa13.47□□□□□ -0.25
HNRNPC-230ENST00000557201 IQSEC3Q9UPP2 1182 aaPredicted RBP13.47□□□□□ -0.25
HNRNPC-230ENST00000557201 PTPRCP08575 1304 aa13.46□□□□□ -0.25
HNRNPC-230ENST00000557201 ZBED9Q6R2W3 1325 aa13.46□□□□□ -0.25
HNRNPC-230ENST00000557201 POTEFA5A3E0 1075 aa13.46□□□□□ -0.25
HNRNPC-230ENST00000557201 BCAMP50895 628 aa13.46□□□□□ -0.25
HNRNPC-230ENST00000557201 SP3Q02447 781 aa13.46□□□□□ -0.25
HNRNPC-230ENST00000557201 METTL24Q5JXM2 366 aa13.46□□□□□ -0.25
HNRNPC-230ENST00000557201 INTS3Q68E01 1043 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-230ENST00000557201 APOBEC3HQ6NTF7 200 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-230ENST00000557201 KLHDC4Q8TBB5 520 aa13.46□□□□□ -0.25
HNRNPC-230ENST00000557201 ARMC5Q96C12 935 aa13.46□□□□□ -0.25
HNRNPC-230ENST00000557201 E9PSI1 815 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 RFX5P48382 616 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 TNNI2P48788 182 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 CHAF1AQ13111 956 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 CAVIN4Q5BKX8 364 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 FKBP1CQ5VVH2 108 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 VPS37DQ86XT2 251 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 SSH1Q8WYL5 1049 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 EFCC1Q9HA90 598 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 SUGT1Q9Y2Z0 365 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 RBBP6Q7Z6E9 1792 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 SPDYE5A6NIY4 337 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 GTF2A2P52657 109 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 CACNB3P54284 484 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 SLFN5Q08AF3 891 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 FAM83AQ86UY5 434 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 TRMT2AQ8IZ69 625 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 FAM43AQ8N2R8 423 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 TEKT1Q969V4 418 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 SNCAIPQ9Y6H5 919 aa13.45□□□□□ -0.26
HNRNPC-230ENST00000557201 CCL15-CCL14A0A0B4J2E2 113 aa13.44□□□□□ -0.26
HNRNPC-230ENST00000557201 PUM3Q15397 648 aaKnown RBP13.44□□□□□ -0.26
HNRNPC-230ENST00000557201 CCL15Q16663 113 aa13.44□□□□□ -0.26
HNRNPC-230ENST00000557201 HHIPL2Q6UWX4 724 aa13.44□□□□□ -0.26
HNRNPC-230ENST00000557201 OTUD5Q96G74 571 aa13.44□□□□□ -0.26
HNRNPC-230ENST00000557201 RPAP1Q9BWH6 1393 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-230ENST00000557201 ATG9AQ7Z3C6 839 aa13.43□□□□□ -0.26
HNRNPC-230ENST00000557201 ERO1BQ86YB8 467 aa13.43□□□□□ -0.26
HNRNPC-230ENST00000557201 CDCA7LQ96GN5 454 aa13.43□□□□□ -0.26
HNRNPC-230ENST00000557201 CSADQ9Y600 493 aa13.43□□□□□ -0.26
HNRNPC-230ENST00000557201 EYA2O00167 538 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms