RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 ELNP15502 786 aa16.26■□□□□ 0.19
PSEN1-220ENST00000557037 SNAPC2Q13487 334 aa16.26■□□□□ 0.19
PSEN1-220ENST00000557037 SLAIN1Q8ND83 568 aa16.26■□□□□ 0.19
PSEN1-220ENST00000557037 HELBQ8NG08 1087 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-220ENST00000557037 UBE2OQ9C0C9 1292 aaKnown RBP16.26■□□□□ 0.19
PSEN1-220ENST00000557037 GREM2Q9H772 168 aa16.26■□□□□ 0.19
PSEN1-220ENST00000557037 CD209Q9NNX6 404 aa16.26■□□□□ 0.19
PSEN1-220ENST00000557037 BABAM1Q9NWV8 329 aa16.26■□□□□ 0.19
PSEN1-220ENST00000557037 DBF4Q9UBU7 674 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-220ENST00000557037 ZNF70Q9UC06 446 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-220ENST00000557037 GABRQQ9UN88 632 aa16.26■□□□□ 0.19
PSEN1-220ENST00000557037 CTSWP56202 376 aa16.25■□□□□ 0.19
PSEN1-220ENST00000557037 RIPK4P57078 832 aa16.25■□□□□ 0.19
PSEN1-220ENST00000557037 NECAB2Q7Z6G3 386 aa16.25■□□□□ 0.19
PSEN1-220ENST00000557037 TMEM39BQ9GZU3 492 aa16.25■□□□□ 0.19
PSEN1-220ENST00000557037 HYPKQ9NX55 129 aa16.25■□□□□ 0.19
PSEN1-220ENST00000557037 CWC25Q9NXE8 425 aaPredicted RBP16.25■□□□□ 0.19
PSEN1-220ENST00000557037 SNCAIPQ9Y6H5 919 aa16.25■□□□□ 0.19
PSEN1-220ENST00000557037 TCP10L2B9ZVM9 353 aa16.24■□□□□ 0.19
PSEN1-220ENST00000557037 ADCY3O60266 1144 aa16.24■□□□□ 0.19
PSEN1-220ENST00000557037 INHAP05111 366 aa16.24■□□□□ 0.19
PSEN1-220ENST00000557037 KCNJ4P48050 445 aa16.24■□□□□ 0.19
PSEN1-220ENST00000557037 GOLGA2Q08379 1002 aa16.24■□□□□ 0.19
PSEN1-220ENST00000557037 TNFAIP1Q13829 316 aa16.24■□□□□ 0.19
PSEN1-220ENST00000557037 CCDC191Q8NCU4 936 aa16.24■□□□□ 0.19
PSEN1-220ENST00000557037 LAS1LQ9Y4W2 734 aaKnown RBP16.24■□□□□ 0.19
PSEN1-220ENST00000557037 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
PSEN1-220ENST00000557037 ERO1BQ86YB8 467 aa16.23■□□□□ 0.19
PSEN1-220ENST00000557037 TTLL11Q8NHH1 800 aa16.23■□□□□ 0.19
PSEN1-220ENST00000557037 ZKSCAN4Q969J2 545 aaPredicted RBP16.23■□□□□ 0.19
PSEN1-220ENST00000557037 TDRD3Q9H7E2 651 aaKnown RBP16.23■□□□□ 0.19
PSEN1-220ENST00000557037 ADGRA2Q96PE1 1338 aa16.22■□□□□ 0.19
PSEN1-220ENST00000557037 SNAP23O00161 211 aa16.22■□□□□ 0.19
PSEN1-220ENST00000557037 PDHXO00330 501 aa16.22■□□□□ 0.19
PSEN1-220ENST00000557037 FCGRTP55899 365 aa16.22■□□□□ 0.19
PSEN1-220ENST00000557037 ANKRD2Q9GZV1 360 aa16.22■□□□□ 0.19
PSEN1-220ENST00000557037 IGHMBP2P38935 993 aaKnown RBP16.21■□□□□ 0.19
PSEN1-220ENST00000557037 PPIL2Q13356 520 aa16.21■□□□□ 0.19
PSEN1-220ENST00000557037 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.21■□□□□ 0.19
PSEN1-220ENST00000557037 CRISPLD2Q9H0B8 497 aa16.21■□□□□ 0.19
PSEN1-220ENST00000557037 PHAXQ9H814 394 aaKnown RBP16.21■□□□□ 0.19
PSEN1-220ENST00000557037 POTEB2H3BUK9 544 aa16.2■□□□□ 0.18
PSEN1-220ENST00000557037 ANKRD23Q86SG2 305 aa16.2■□□□□ 0.18
PSEN1-220ENST00000557037 WRNIP1Q96S55 665 aa16.2■□□□□ 0.18
PSEN1-220ENST00000557037 PAK6Q9NQU5 681 aaPredicted RBP16.2■□□□□ 0.18
PSEN1-220ENST00000557037 TAOK2Q9UL54 1235 aa16.2■□□□□ 0.18
PSEN1-220ENST00000557037 PRUNE2Q8WUY3 3088 aa16.19■□□□□ 0.18
PSEN1-220ENST00000557037 CHL1O00533 1208 aa16.19■□□□□ 0.18
PSEN1-220ENST00000557037 FLT3LGP49771 235 aa16.19■□□□□ 0.18
PSEN1-220ENST00000557037 FAM109BQ6ICB4 259 aaPredicted RBP16.19■□□□□ 0.18
PSEN1-220ENST00000557037 MAFAQ8NHW3 353 aaPredicted RBP16.19■□□□□ 0.18
PSEN1-220ENST00000557037 PLA2G5P39877 138 aa16.18■□□□□ 0.18
PSEN1-220ENST00000557037 MGAMO43451 1857 aa16.18■□□□□ 0.18
PSEN1-220ENST00000557037 TAF5LO75529 589 aa16.17■□□□□ 0.18
PSEN1-220ENST00000557037 CYP2C8P10632 490 aa16.17■□□□□ 0.18
PSEN1-220ENST00000557037 BCRP11274 1271 aa16.17■□□□□ 0.18
PSEN1-220ENST00000557037 TNNI2P48788 182 aa16.17■□□□□ 0.18
PSEN1-220ENST00000557037 FKBP1AP62942 108 aaKnown RBP16.17■□□□□ 0.18
PSEN1-220ENST00000557037 CHRNDQ07001 517 aa16.17■□□□□ 0.18
PSEN1-220ENST00000557037 DZIP1LQ8IYY4 767 aaKnown RBP16.17■□□□□ 0.18
PSEN1-220ENST00000557037 FAM122AQ96E09 287 aa16.17■□□□□ 0.18
PSEN1-220ENST00000557037 MPHOSPH8Q99549 860 aa16.17■□□□□ 0.18
PSEN1-220ENST00000557037 PNNQ9H307 717 aaKnown RBP16.17■□□□□ 0.18
PSEN1-220ENST00000557037 HOXB7P09629 217 aa16.16■□□□□ 0.18
PSEN1-220ENST00000557037 IL1R1P14778 569 aa16.16■□□□□ 0.18
PSEN1-220ENST00000557037 CAPN2P17655 700 aa16.16■□□□□ 0.18
PSEN1-220ENST00000557037 CACNB3P54284 484 aa16.16■□□□□ 0.18
PSEN1-220ENST00000557037 MDM2Q00987 491 aaPredicted RBP16.16■□□□□ 0.18
PSEN1-220ENST00000557037 DUSP27Q5VZP5 1158 aa16.16■□□□□ 0.18
PSEN1-220ENST00000557037 CDX2Q99626 313 aaPredicted RBP16.16■□□□□ 0.18
PSEN1-220ENST00000557037 METTL22Q9BUU2 404 aaPredicted RBP16.16■□□□□ 0.18
PSEN1-220ENST00000557037 PCGF6Q9BYE7 350 aa16.16■□□□□ 0.18
PSEN1-220ENST00000557037 NBPF3Q9H094 633 aa16.16■□□□□ 0.18
PSEN1-220ENST00000557037 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.16■□□□□ 0.181e-9■■■■■ 54.1
PSEN1-220ENST00000557037 TTF2Q9UNY4 1162 aaKnown RBP16.16■□□□□ 0.18
PSEN1-220ENST00000557037 ARAP2Q8WZ64 1704 aa16.16■□□□□ 0.18
PSEN1-220ENST00000557037 MYH3P11055 1940 aa16.15■□□□□ 0.18
PSEN1-220ENST00000557037 NCOR1O75376 2440 aa16.15■□□□□ 0.18
PSEN1-220ENST00000557037 TMPOP42166 694 aaKnown RBP16.15■□□□□ 0.18
PSEN1-220ENST00000557037 LMOD3Q0VAK6 560 aa16.15■□□□□ 0.18
PSEN1-220ENST00000557037 NEUROD2Q15784 382 aa16.15■□□□□ 0.18
PSEN1-220ENST00000557037 ZNF697Q5TEC3 545 aa16.15■□□□□ 0.18
PSEN1-220ENST00000557037 ZNF804AQ7Z570 1209 aa16.15■□□□□ 0.18
PSEN1-220ENST00000557037 PXYLP1Q8TE99 480 aa16.15■□□□□ 0.18
PSEN1-220ENST00000557037 SYMPKQ92797 1274 aaKnown RBP16.15■□□□□ 0.18
PSEN1-220ENST00000557037 PARK7Q99497 189 aaKnown RBP16.15■□□□□ 0.18
PSEN1-220ENST00000557037 LAMA2P24043 3122 aaKnown RBP16.15■□□□□ 0.18
PSEN1-220ENST00000557037 EYSQ5T1H1 3165 aa16.15■□□□□ 0.18
PSEN1-220ENST00000557037 FAM205AQ6ZU69 1335 aa16.15■□□□□ 0.18
PSEN1-220ENST00000557037 ITGA6P23229 1130 aa16.14■□□□□ 0.17
PSEN1-220ENST00000557037 PPATQ06203 517 aa16.14■□□□□ 0.17
PSEN1-220ENST00000557037 MOGSQ13724 837 aa16.14■□□□□ 0.17
PSEN1-220ENST00000557037 C11orf49Q9H6J7 331 aa16.14■□□□□ 0.17
PSEN1-220ENST00000557037 SERPINA10Q9UK55 444 aa16.14■□□□□ 0.17
PSEN1-220ENST00000557037 TNPO2O14787 897 aaKnown RBP16.13■□□□□ 0.17
PSEN1-220ENST00000557037 INPP5BP32019 993 aa16.13■□□□□ 0.17
PSEN1-220ENST00000557037 MFSD14BQ5SR56 506 aa16.13■□□□□ 0.17
PSEN1-220ENST00000557037 ANKLE1Q8NAG6 615 aa16.13■□□□□ 0.17
PSEN1-220ENST00000557037 CLSPNQ9HAW4 1339 aa16.13■□□□□ 0.17
PSEN1-220ENST00000557037 DOCK3Q8IZD9 2030 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms