RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 WDHD1O75717 1129 aaPredicted RBP21.48■■□□□ 1.03
CHGA-206ENST00000556876 PUM3Q15397 648 aaKnown RBP21.48■■□□□ 1.03
CHGA-206ENST00000556876 FKBP1CQ5VVH2 108 aa21.48■■□□□ 1.03
CHGA-206ENST00000556876 ERO1AQ96HE7 468 aa21.48■■□□□ 1.03
CHGA-206ENST00000556876 TDRD3Q9H7E2 651 aaKnown RBP21.48■■□□□ 1.03
CHGA-206ENST00000556876 PCDHAC2Q9Y5I4 1007 aa21.48■■□□□ 1.03
CHGA-206ENST00000556876 TESPA1A2RU30 521 aaPredicted RBP21.47■■□□□ 1.03
CHGA-206ENST00000556876 SOX10P56693 466 aa21.47■■□□□ 1.03
CHGA-206ENST00000556876 INTS3Q68E01 1043 aaKnown RBP21.47■■□□□ 1.03
CHGA-206ENST00000556876 ANKRD44Q8N8A2 993 aa21.47■■□□□ 1.03
CHGA-206ENST00000556876 SSH1Q8WYL5 1049 aa21.47■■□□□ 1.03
CHGA-206ENST00000556876 USP44Q9H0E7 712 aa21.47■■□□□ 1.03
CHGA-206ENST00000556876 ZNF646O15015 1829 aaPredicted RBP21.46■■□□□ 1.03
CHGA-206ENST00000556876 MAP3K9P80192 1104 aa21.46■■□□□ 1.03
CHGA-206ENST00000556876 SLFN5Q08AF3 891 aa21.46■■□□□ 1.03
CHGA-206ENST00000556876 LRRC24Q50LG9 513 aa21.46■■□□□ 1.03
CHGA-206ENST00000556876 CLMNQ96JQ2 1002 aa21.46■■□□□ 1.03
CHGA-206ENST00000556876 ZDHHC15Q96MV8 337 aa21.46■■□□□ 1.03
CHGA-206ENST00000556876 CSADQ9Y600 493 aa21.46■■□□□ 1.03
CHGA-206ENST00000556876 FAM83AQ86UY5 434 aa21.45■■□□□ 1.02
CHGA-206ENST00000556876 VGLL2Q8N8G2 317 aa21.45■■□□□ 1.02
CHGA-206ENST00000556876 WDR66Q8TBY9 1149 aa21.45■■□□□ 1.02
CHGA-206ENST00000556876 EYA2O00167 538 aa21.44■■□□□ 1.02
CHGA-206ENST00000556876 SLC5A1P13866 664 aa21.44■■□□□ 1.02
CHGA-206ENST00000556876 GTF2A2P52657 109 aa21.44■■□□□ 1.02
CHGA-206ENST00000556876 CHAF1AQ13111 956 aaPredicted RBP21.44■■□□□ 1.02
CHGA-206ENST00000556876 LPIN2Q92539 896 aa21.44■■□□□ 1.02
CHGA-206ENST00000556876 GNL3LQ9NVN8 582 aaKnown RBP21.44■■□□□ 1.02
CHGA-206ENST00000556876 FZD1Q9UP38 647 aa21.44■■□□□ 1.02
CHGA-206ENST00000556876 TCP10L2B9ZVM9 353 aa21.43■■□□□ 1.02
CHGA-206ENST00000556876 HHIPL2Q6UWX4 724 aa21.43■■□□□ 1.02
CHGA-206ENST00000556876 OPTNQ96CV9 577 aa21.43■■□□□ 1.02
CHGA-206ENST00000556876 TEPSINQ96N21 525 aa21.43■■□□□ 1.02
CHGA-206ENST00000556876 SSC5DA1L4H1 1573 aa21.43■■□□□ 1.02
CHGA-206ENST00000556876 IGF2BP3O00425 579 aaKnown RBP eCLIP21.42■■□□□ 1.02
CHGA-206ENST00000556876 SLC34A2O95436 690 aa21.42■■□□□ 1.02
CHGA-206ENST00000556876 FGFR2P21802 821 aa21.42■■□□□ 1.02
CHGA-206ENST00000556876 BCAMP50895 628 aa21.42■■□□□ 1.02
CHGA-206ENST00000556876 DCAF15Q66K64 600 aa21.42■■□□□ 1.02
CHGA-206ENST00000556876 SMC4Q9NTJ3 1288 aa21.42■■□□□ 1.02
CHGA-206ENST00000556876 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.42■■□□□ 1.02
CHGA-206ENST00000556876 TRIM17Q9Y577 477 aa21.42■■□□□ 1.02
CHGA-206ENST00000556876 SP3Q02447 781 aa21.41■■□□□ 1.02
CHGA-206ENST00000556876 API5Q9BZZ5 524 aaKnown RBP21.41■■□□□ 1.02
CHGA-206ENST00000556876 TMEM39BQ9GZU3 492 aa21.41■■□□□ 1.02
CHGA-206ENST00000556876 R3HDMLQ9H3Y0 253 aa21.41■■□□□ 1.02
CHGA-206ENST00000556876 ELP3Q9H9T3 547 aa21.41■■□□□ 1.02
CHGA-206ENST00000556876 ZCCHC17Q9NP64 241 aaKnown RBP21.41■■□□□ 1.02
CHGA-206ENST00000556876 CIAO1O76071 339 aa21.4■■□□□ 1.02
CHGA-206ENST00000556876 UBTFL1P0CB47 393 aaPredicted RBP21.4■■□□□ 1.02
CHGA-206ENST00000556876 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.4■■□□□ 1.02
CHGA-206ENST00000556876 OTOP1Q7RTM1 612 aa21.4■■□□□ 1.02
CHGA-206ENST00000556876 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.4■■□□□ 1.02
CHGA-206ENST00000556876 ZFYVE28Q9HCC9 887 aa21.4■■□□□ 1.02
CHGA-206ENST00000556876 CEP126Q9P2H0 1117 aa21.4■■□□□ 1.02
CHGA-206ENST00000556876 IQSEC3Q9UPP2 1182 aaPredicted RBP21.4■■□□□ 1.02
CHGA-206ENST00000556876 AOX1Q06278 1338 aa21.39■■□□□ 1.01
CHGA-206ENST00000556876 ZBTB22O15209 634 aa21.39■■□□□ 1.01
CHGA-206ENST00000556876 CRHR2Q13324 411 aa21.39■■□□□ 1.01
CHGA-206ENST00000556876 MS4A4AQ96JQ5 239 aa21.39■■□□□ 1.01
CHGA-206ENST00000556876 EFCC1Q9HA90 598 aa21.39■■□□□ 1.01
CHGA-206ENST00000556876 SEMA3EO15041 775 aa21.38■■□□□ 1.01
CHGA-206ENST00000556876 GJA5P36382 358 aa21.38■■□□□ 1.01
CHGA-206ENST00000556876 VGLL4Q14135 290 aa21.38■■□□□ 1.01
CHGA-206ENST00000556876 PRPF38BQ5VTL8 546 aaKnown RBP21.38■■□□□ 1.01
CHGA-206ENST00000556876 APOBEC3HQ6NTF7 200 aaKnown RBP21.38■■□□□ 1.01
CHGA-206ENST00000556876 ERO1BQ86YB8 467 aa21.38■■□□□ 1.01
CHGA-206ENST00000556876 SPDYE5A6NIY4 337 aa21.37■■□□□ 1.01
CHGA-206ENST00000556876 CETPP11597 493 aa21.37■■□□□ 1.01
CHGA-206ENST00000556876 IL15P40933 162 aaPredicted RBP21.37■■□□□ 1.01
CHGA-206ENST00000556876 RFX5P48382 616 aaPredicted RBP21.37■■□□□ 1.01
CHGA-206ENST00000556876 TRMT2AQ8IZ69 625 aaKnown RBP21.37■■□□□ 1.01
CHGA-206ENST00000556876 ZGPATQ8N5A5 531 aaKnown RBP21.37■■□□□ 1.01
CHGA-206ENST00000556876 KLHDC4Q8TBB5 520 aa21.37■■□□□ 1.01
CHGA-206ENST00000556876 PTPN18Q99952 460 aa21.37■■□□□ 1.01
CHGA-206ENST00000556876 PTPN22Q9Y2R2 807 aa21.37■■□□□ 1.01
CHGA-206ENST00000556876 CCL15-CCL14A0A0B4J2E2 113 aa21.36■■□□□ 1.01
CHGA-206ENST00000556876 SNAPC2Q13487 334 aa21.36■■□□□ 1.01
CHGA-206ENST00000556876 CCL15Q16663 113 aa21.36■■□□□ 1.01
CHGA-206ENST00000556876 ECM29Q5VYK3 1845 aa21.36■■□□□ 1.01
CHGA-206ENST00000556876 RPAP1Q9BWH6 1393 aaPredicted RBP21.36■■□□□ 1.01
CHGA-206ENST00000556876 PDE4DIPQ5VU43 2346 aa21.35■■□□□ 1.01
CHGA-206ENST00000556876 NBPF11Q86T75 865 aa21.35■■□□□ 1.01
CHGA-206ENST00000556876 FAM151AQ8WW52 585 aa21.35■■□□□ 1.01
CHGA-206ENST00000556876 WRNIP1Q96S55 665 aa21.35■■□□□ 1.01
CHGA-206ENST00000556876 ZNF341Q9BYN7 854 aa21.35■■□□□ 1.01
CHGA-206ENST00000556876 DENND2AQ9ULE3 1009 aa21.35■■□□□ 1.01
CHGA-206ENST00000556876 A0A1B0GUL6 1792 aa21.34■■□□□ 1.01
CHGA-206ENST00000556876 GNRH1P01148 92 aa21.34■■□□□ 1.01
CHGA-206ENST00000556876 TAF1CQ15572 869 aaPredicted RBP21.34■■□□□ 1.01
CHGA-206ENST00000556876 GRIK5Q16478 980 aa21.34■■□□□ 1.01
CHGA-206ENST00000556876 ATP2B3Q16720 1220 aa21.34■■□□□ 1.01
CHGA-206ENST00000556876 ATG9AQ7Z3C6 839 aa21.34■■□□□ 1.01
CHGA-206ENST00000556876 SLF2Q8IX21 1173 aa21.34■■□□□ 1.01
CHGA-206ENST00000556876 BRI3BPQ8WY22 251 aa21.34■■□□□ 1.01
CHGA-206ENST00000556876 ARHGAP45Q92619 1136 aa21.34■■□□□ 1.01
CHGA-206ENST00000556876 OTUD5Q96G74 571 aa21.34■■□□□ 1.01
CHGA-206ENST00000556876 SALL1Q9NSC2 1324 aa21.33■■□□□ 1.01
CHGA-206ENST00000556876 LDHBP07195 334 aaKnown RBP21.33■■□□□ 1.01
CHGA-206ENST00000556876 PPATQ06203 517 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms