RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 DZIP1LQ8IYY4 767 aaKnown RBP18.63■□□□□ 0.57
CHD8-211ENST00000556833 OPTNQ96CV9 577 aa18.63■□□□□ 0.57
CHD8-211ENST00000556833 RIPOR2Q9Y4F9 1068 aa18.63■□□□□ 0.57
CHD8-211ENST00000556833 CENPFP49454 3210 aa18.62■□□□□ 0.57
CHD8-211ENST00000556833 NOM1Q5C9Z4 860 aaKnown RBP18.62■□□□□ 0.57
CHD8-211ENST00000556833 ANKRD13AQ8IZ07 590 aa18.62■□□□□ 0.57
CHD8-211ENST00000556833 ANKRD44Q8N8A2 993 aa18.62■□□□□ 0.57
CHD8-211ENST00000556833 PTPN18Q99952 460 aa18.62■□□□□ 0.57
CHD8-211ENST00000556833 CFHR5Q9BXR6 569 aa18.62■□□□□ 0.57
CHD8-211ENST00000556833 ZSWIM8A7E2V4 1837 aa18.62■□□□□ 0.57
CHD8-211ENST00000556833 MROH5Q6ZUA9 1318 aa18.61■□□□□ 0.57
CHD8-211ENST00000556833 CAP1Q01518 475 aa18.61■□□□□ 0.57
CHD8-211ENST00000556833 TNFAIP1Q13829 316 aa18.61■□□□□ 0.57
CHD8-211ENST00000556833 MRPL50Q8N5N7 158 aaKnown RBP18.61■□□□□ 0.57
CHD8-211ENST00000556833 TEPSINQ96N21 525 aa18.61■□□□□ 0.57
CHD8-211ENST00000556833 SERPINA10Q9UK55 444 aa18.61■□□□□ 0.57
CHD8-211ENST00000556833 BCAMP50895 628 aa18.6■□□□□ 0.57
CHD8-211ENST00000556833 INHBEP58166 350 aa18.6■□□□□ 0.57
CHD8-211ENST00000556833 AK9Q5TCS8 1911 aa18.6■□□□□ 0.57
CHD8-211ENST00000556833 POTEFA5A3E0 1075 aa18.59■□□□□ 0.57
CHD8-211ENST00000556833 ECM2O94769 699 aaPredicted RBP18.59■□□□□ 0.57
CHD8-211ENST00000556833 VGLL4Q14135 290 aa18.59■□□□□ 0.57
CHD8-211ENST00000556833 PRPF38BQ5VTL8 546 aaKnown RBP18.59■□□□□ 0.57
CHD8-211ENST00000556833 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.59■□□□□ 0.57
CHD8-211ENST00000556833 OTUD5Q96G74 571 aa18.59■□□□□ 0.57
CHD8-211ENST00000556833 KIAA0100Q14667 2235 aaKnown RBP18.58■□□□□ 0.57
CHD8-211ENST00000556833 CAVIN4Q5BKX8 364 aa18.58■□□□□ 0.56
CHD8-211ENST00000556833 OTUD7BQ6GQQ9 843 aa18.58■□□□□ 0.56
CHD8-211ENST00000556833 FBXO33Q7Z6M2 555 aa18.58■□□□□ 0.56
CHD8-211ENST00000556833 UTYO14607 1347 aa18.57■□□□□ 0.56
CHD8-211ENST00000556833 CCL15-CCL14A0A0B4J2E2 113 aa18.57■□□□□ 0.56
CHD8-211ENST00000556833 TNNI2P48788 182 aa18.57■□□□□ 0.56
CHD8-211ENST00000556833 CCL15Q16663 113 aa18.57■□□□□ 0.56
CHD8-211ENST00000556833 RABL6Q3YEC7 729 aaPredicted RBP18.57■□□□□ 0.56
CHD8-211ENST00000556833 VGLL2Q8N8G2 317 aa18.57■□□□□ 0.56
CHD8-211ENST00000556833 BRI3BPQ8WY22 251 aa18.57■□□□□ 0.56
CHD8-211ENST00000556833 SSH1Q8WYL5 1049 aa18.57■□□□□ 0.56
CHD8-211ENST00000556833 ERO1AQ96HE7 468 aa18.57■□□□□ 0.56
CHD8-211ENST00000556833 ZNF521Q96K83 1311 aa18.56■□□□□ 0.56
CHD8-211ENST00000556833 MYCP01106 439 aaPredicted RBP18.56■□□□□ 0.56
CHD8-211ENST00000556833 TAF1CQ15572 869 aaPredicted RBP18.56■□□□□ 0.56
CHD8-211ENST00000556833 TEKT1Q969V4 418 aa18.56■□□□□ 0.56
CHD8-211ENST00000556833 EFCC1Q9HA90 598 aa18.56■□□□□ 0.56
CHD8-211ENST00000556833 CSADQ9Y600 493 aa18.56■□□□□ 0.56
CHD8-211ENST00000556833 MKI67P46013 3256 aaKnown RBP18.55■□□□□ 0.56
CHD8-211ENST00000556833 PDE8BO95263 885 aa18.55■□□□□ 0.56
CHD8-211ENST00000556833 MAP3K9P80192 1104 aa18.55■□□□□ 0.56
CHD8-211ENST00000556833 SP3Q02447 781 aa18.55■□□□□ 0.56
CHD8-211ENST00000556833 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.55■□□□□ 0.56
CHD8-211ENST00000556833 MS4A4AQ96JQ5 239 aa18.55■□□□□ 0.56
CHD8-211ENST00000556833 PTPN22Q9Y2R2 807 aa18.55■□□□□ 0.56
CHD8-211ENST00000556833 FAM43AQ8N2R8 423 aa18.54■□□□□ 0.56
CHD8-211ENST00000556833 ZKSCAN4Q969J2 545 aaPredicted RBP18.54■□□□□ 0.56
CHD8-211ENST00000556833 WRNIP1Q96S55 665 aa18.54■□□□□ 0.56
CHD8-211ENST00000556833 USP44Q9H0E7 712 aa18.54■□□□□ 0.56
CHD8-211ENST00000556833 SIL1Q9H173 461 aa18.54■□□□□ 0.56
CHD8-211ENST00000556833 TMOD2Q9NZR1 351 aa18.54■□□□□ 0.56
CHD8-211ENST00000556833 RBBP6Q7Z6E9 1792 aaKnown RBP18.53■□□□□ 0.56
CHD8-211ENST00000556833 BRCA2P51587 3418 aa18.53■□□□□ 0.56
CHD8-211ENST00000556833 UNCXA6NJT0 531 aa18.53■□□□□ 0.56
CHD8-211ENST00000556833 MIGA2Q7L4E1 593 aa18.53■□□□□ 0.56
CHD8-211ENST00000556833 TBC1D22AQ8WUA7 517 aa18.53■□□□□ 0.56
CHD8-211ENST00000556833 SNCAIPQ9Y6H5 919 aa18.53■□□□□ 0.56
CHD8-211ENST00000556833 PTPRCP08575 1304 aa18.52■□□□□ 0.56
CHD8-211ENST00000556833 TESPA1A2RU30 521 aaPredicted RBP18.52■□□□□ 0.56
CHD8-211ENST00000556833 IFIT1P09914 478 aaKnown RBP18.52■□□□□ 0.56
CHD8-211ENST00000556833 GTF2A2P52657 109 aa18.52■□□□□ 0.56
CHD8-211ENST00000556833 PUM3Q15397 648 aaKnown RBP18.52■□□□□ 0.56
CHD8-211ENST00000556833 CDCA7LQ96GN5 454 aa18.52■□□□□ 0.56
CHD8-211ENST00000556833 EN2P19622 333 aaPredicted RBP18.51■□□□□ 0.55
CHD8-211ENST00000556833 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
CHD8-211ENST00000556833 TCP10Q12799 353 aa18.51■□□□□ 0.55
CHD8-211ENST00000556833 APOBEC3HQ6NTF7 200 aaKnown RBP18.51■□□□□ 0.55
CHD8-211ENST00000556833 ZDHHC15Q96MV8 337 aa18.51■□□□□ 0.55
CHD8-211ENST00000556833 ARHGAP39Q9C0H5 1083 aa18.51■□□□□ 0.55
CHD8-211ENST00000556833 ZFYVE28Q9HCC9 887 aa18.51■□□□□ 0.55
CHD8-211ENST00000556833 SMC4Q9NTJ3 1288 aa18.51■□□□□ 0.55
CHD8-211ENST00000556833 PTCH2Q9Y6C5 1203 aa18.51■□□□□ 0.55
CHD8-211ENST00000556833 SLC5A1P13866 664 aa18.5■□□□□ 0.55
CHD8-211ENST00000556833 FGFR2P21802 821 aa18.5■□□□□ 0.55
CHD8-211ENST00000556833 RFX5P48382 616 aaPredicted RBP18.5■□□□□ 0.55
CHD8-211ENST00000556833 DIXDC1Q155Q3 683 aa18.5■□□□□ 0.55
CHD8-211ENST00000556833 SPDYE5A6NIY4 337 aa18.49■□□□□ 0.55
CHD8-211ENST00000556833 E9PSI1 815 aa18.49■□□□□ 0.55
CHD8-211ENST00000556833 EYA2O00167 538 aa18.49■□□□□ 0.55
CHD8-211ENST00000556833 INPP5BP32019 993 aa18.49■□□□□ 0.55
CHD8-211ENST00000556833 HDLBPQ00341 1268 aaKnown RBP18.49■□□□□ 0.55
CHD8-211ENST00000556833 MAST3O60307 1309 aa18.49■□□□□ 0.55
CHD8-211ENST00000556833 BTBD19C9JJ37 291 aa18.48■□□□□ 0.55
CHD8-211ENST00000556833 IRF6O14896 467 aa18.48■□□□□ 0.55
CHD8-211ENST00000556833 MYH2Q9UKX2 1941 aa18.48■□□□□ 0.55
CHD8-211ENST00000556833 PRDX5P30044 214 aa18.47■□□□□ 0.55
CHD8-211ENST00000556833 SLFN5Q08AF3 891 aa18.47■□□□□ 0.55
CHD8-211ENST00000556833 SLC9C1Q4G0N8 1177 aa18.47■□□□□ 0.55
CHD8-211ENST00000556833 INTS3Q68E01 1043 aaKnown RBP18.47■□□□□ 0.55
CHD8-211ENST00000556833 ATG9AQ7Z3C6 839 aa18.47■□□□□ 0.55
CHD8-211ENST00000556833 ERO1BQ86YB8 467 aa18.47■□□□□ 0.55
CHD8-211ENST00000556833 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.47■□□□□ 0.55
CHD8-211ENST00000556833 ARMC5Q96C12 935 aa18.47■□□□□ 0.55
CHD8-211ENST00000556833 PA2G4Q9UQ80 394 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms