RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 VEGFBP49765 207 aa13.24□□□□□ -0.29
IFT43-212ENST00000556742 FKBP1BP68106 108 aa13.24□□□□□ -0.29
IFT43-212ENST00000556742 OS9Q13438 667 aaPredicted RBP13.24□□□□□ -0.29
IFT43-212ENST00000556742 ZGPATQ8N5A5 531 aaKnown RBP13.24□□□□□ -0.29
IFT43-212ENST00000556742 C2orf69Q8N8R5 385 aa13.24□□□□□ -0.29
IFT43-212ENST00000556742 PRMT6Q96LA8 375 aaPredicted RBP13.24□□□□□ -0.29
IFT43-212ENST00000556742 YTHDC1Q96MU7 727 aaKnown RBP13.24□□□□□ -0.29
IFT43-212ENST00000556742 GBA2Q9HCG7 927 aaPredicted RBP13.24□□□□□ -0.29
IFT43-212ENST00000556742 PPP2R3BQ9Y5P8 575 aa13.24□□□□□ -0.29
IFT43-212ENST00000556742 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.24□□□□□ -0.29
IFT43-212ENST00000556742 DOCK2Q92608 1830 aa13.23□□□□□ -0.29
IFT43-212ENST00000556742 WDR33Q9C0J8 1336 aaKnown RBP13.23□□□□□ -0.29
IFT43-212ENST00000556742 HMMRO75330 724 aa13.23□□□□□ -0.29
IFT43-212ENST00000556742 RBM5P52756 815 aaKnown RBP eCLIP13.23□□□□□ -0.29
IFT43-212ENST00000556742 GRIK5Q16478 980 aa13.23□□□□□ -0.29
IFT43-212ENST00000556742 HSP90AB4PQ58FF6 505 aa13.23□□□□□ -0.29
IFT43-212ENST00000556742 C20orf194Q5TEA3 1177 aa13.23□□□□□ -0.29
IFT43-212ENST00000556742 DLK2Q6UY11 383 aa13.23□□□□□ -0.29
IFT43-212ENST00000556742 ERC1Q8IUD2 1116 aa13.23□□□□□ -0.29
IFT43-212ENST00000556742 TEKT1Q969V4 418 aa13.23□□□□□ -0.29
IFT43-212ENST00000556742 ZDHHC15Q96MV8 337 aa13.23□□□□□ -0.29
IFT43-212ENST00000556742 NEUROD6Q96NK8 337 aa13.23□□□□□ -0.29
IFT43-212ENST00000556742 OTOFQ9HC10 1997 aa13.22□□□□□ -0.29
IFT43-212ENST00000556742 ARID4AP29374 1257 aaPredicted RBP13.22□□□□□ -0.29
IFT43-212ENST00000556742 NF2P35240 595 aa13.22□□□□□ -0.29
IFT43-212ENST00000556742 TNFAIP1Q13829 316 aa13.22□□□□□ -0.29
IFT43-212ENST00000556742 RASGRF1Q13972 1273 aa13.22□□□□□ -0.29
IFT43-212ENST00000556742 SPDYE2Q495Y8 402 aa13.22□□□□□ -0.29
IFT43-212ENST00000556742 TNNI3KQ59H18 835 aa13.22□□□□□ -0.29
IFT43-212ENST00000556742 GORABQ5T7V8 394 aa13.22□□□□□ -0.29
IFT43-212ENST00000556742 HHIPL2Q6UWX4 724 aa13.22□□□□□ -0.29
IFT43-212ENST00000556742 DEFB129Q9H1M3 183 aa13.22□□□□□ -0.29
IFT43-212ENST00000556742 PCDHAC2Q9Y5I4 1007 aa13.22□□□□□ -0.29
IFT43-212ENST00000556742 FPGT-TNNI3KV9GXZ4 949 aa13.22□□□□□ -0.29
IFT43-212ENST00000556742 CDK5RAP2Q96SN8 1893 aa13.21□□□□□ -0.29
IFT43-212ENST00000556742 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.29
IFT43-212ENST00000556742 HUNKP57058 714 aa13.21□□□□□ -0.29
IFT43-212ENST00000556742 CAPNS2Q96L46 248 aa13.21□□□□□ -0.29
IFT43-212ENST00000556742 FOCADQ5VW36 1801 aa13.2□□□□□ -0.3
IFT43-212ENST00000556742 CLRN2A0PK11 232 aa13.2□□□□□ -0.3
IFT43-212ENST00000556742 UQCRFS1P1P0C7P4 283 aa13.2□□□□□ -0.3
IFT43-212ENST00000556742 PRDX5P30044 214 aa13.2□□□□□ -0.3
IFT43-212ENST00000556742 MAP2K2P36507 400 aa13.2□□□□□ -0.3
IFT43-212ENST00000556742 RRP1P56182 461 aaKnown RBP13.2□□□□□ -0.3
IFT43-212ENST00000556742 FKBP1CQ5VVH2 108 aa13.2□□□□□ -0.3
IFT43-212ENST00000556742 SPTY2D1Q68D10 685 aaPredicted RBP13.2□□□□□ -0.3
IFT43-212ENST00000556742 CYP4F22Q6NT55 531 aa13.2□□□□□ -0.3
IFT43-212ENST00000556742 SIRT2Q8IXJ6 389 aa13.2□□□□□ -0.3
IFT43-212ENST00000556742 ZNF512BQ96KM6 892 aaPredicted RBP13.2□□□□□ -0.3
IFT43-212ENST00000556742 TDRD3Q9H7E2 651 aaKnown RBP13.2□□□□□ -0.3
IFT43-212ENST00000556742 VEZTQ9HBM0 779 aa13.2□□□□□ -0.3
IFT43-212ENST00000556742 ZNF70Q9UC06 446 aaPredicted RBP13.2□□□□□ -0.3
IFT43-212ENST00000556742 SCAF8Q9UPN6 1271 aaKnown RBP13.2□□□□□ -0.3
IFT43-212ENST00000556742 EXOC6BQ9Y2D4 811 aa13.2□□□□□ -0.3
IFT43-212ENST00000556742 AOX1Q06278 1338 aa13.19□□□□□ -0.3
IFT43-212ENST00000556742 IGSF3O75054 1194 aa13.19□□□□□ -0.3
IFT43-212ENST00000556742 TNNI2P48788 182 aa13.19□□□□□ -0.3
IFT43-212ENST00000556742 CCDC158Q5M9N0 1113 aa13.19□□□□□ -0.3
IFT43-212ENST00000556742 APOBEC3HQ6NTF7 200 aaKnown RBP13.19□□□□□ -0.3
IFT43-212ENST00000556742 RGMBQ6NW40 437 aa13.19□□□□□ -0.3
IFT43-212ENST00000556742 PAXIP1Q6ZW49 1069 aaPredicted RBP13.19□□□□□ -0.3
IFT43-212ENST00000556742 SPATA5Q8NB90 893 aa13.19□□□□□ -0.3
IFT43-212ENST00000556742 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
IFT43-212ENST00000556742 SSC5DA1L4H1 1573 aa13.19□□□□□ -0.3
IFT43-212ENST00000556742 MYH7P12883 1935 aa13.19□□□□□ -0.3
IFT43-212ENST00000556742 RAB11FIP3O75154 756 aa13.18□□□□□ -0.3
IFT43-212ENST00000556742 MCAMP43121 646 aa13.18□□□□□ -0.3
IFT43-212ENST00000556742 MAP2K1Q02750 393 aaPredicted RBP13.18□□□□□ -0.3
IFT43-212ENST00000556742 NOGQ13253 232 aa13.18□□□□□ -0.3
IFT43-212ENST00000556742 RASA3Q14644 834 aa13.18□□□□□ -0.3
IFT43-212ENST00000556742 SUPT20HL1Q3ZLR7 823 aa13.18□□□□□ -0.3
IFT43-212ENST00000556742 PRAMEF18Q5VWM3 479 aa13.18□□□□□ -0.3
IFT43-212ENST00000556742 FAM83AQ86UY5 434 aa13.18□□□□□ -0.3
IFT43-212ENST00000556742 SLF2Q8IX21 1173 aa13.18□□□□□ -0.3
IFT43-212ENST00000556742 CCDC102AQ96A19 550 aa13.18□□□□□ -0.3
IFT43-212ENST00000556742 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
IFT43-212ENST00000556742 KIF1BPQ96EK5 621 aa13.18□□□□□ -0.3
IFT43-212ENST00000556742 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
IFT43-212ENST00000556742 DBNDD2Q9BQY9 259 aa13.18□□□□□ -0.3
IFT43-212ENST00000556742 DBNLQ9UJU6 430 aaKnown RBP13.18□□□□□ -0.3
IFT43-212ENST00000556742 UNCXA6NJT0 531 aa13.17□□□□□ -0.3
IFT43-212ENST00000556742 HSPA1AP0DMV8 641 aaKnown RBP13.17□□□□□ -0.3
IFT43-212ENST00000556742 HSPA1BP0DMV9 641 aaKnown RBP13.17□□□□□ -0.3
IFT43-212ENST00000556742 MAP3K11Q16584 847 aa13.17□□□□□ -0.3
IFT43-212ENST00000556742 TTC39AQ5SRH9 613 aa13.17□□□□□ -0.3
IFT43-212ENST00000556742 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
IFT43-212ENST00000556742 TMOD2Q9NZR1 351 aa13.17□□□□□ -0.3
IFT43-212ENST00000556742 ABCF2Q9UG63 623 aa13.17□□□□□ -0.3
IFT43-212ENST00000556742 DAGLAQ9Y4D2 1042 aa13.17□□□□□ -0.3
IFT43-212ENST00000556742 RPAP1Q9BWH6 1393 aaPredicted RBP13.17□□□□□ -0.3
IFT43-212ENST00000556742 GAKO14976 1311 aa13.16□□□□□ -0.3
IFT43-212ENST00000556742 FAM155AB1AL88 458 aaPredicted RBP13.16□□□□□ -0.3
IFT43-212ENST00000556742 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
IFT43-212ENST00000556742 ZNF157P51786 506 aaPredicted RBP13.16□□□□□ -0.3
IFT43-212ENST00000556742 DIXDC1Q155Q3 683 aa13.16□□□□□ -0.3
IFT43-212ENST00000556742 ERICH6Q7L0X2 663 aa13.16□□□□□ -0.3
IFT43-212ENST00000556742 ARMC9Q7Z3E5 817 aa13.16□□□□□ -0.3
IFT43-212ENST00000556742 DZIP1Q86YF9 867 aaKnown RBP13.16□□□□□ -0.3
IFT43-212ENST00000556742 CLASRPQ8N2M8 674 aaKnown RBP13.16□□□□□ -0.3
IFT43-212ENST00000556742 TEPSINQ96N21 525 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms