RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 FAM200AQ8TCP9 573 aa7.88□□□□□ -1.15
CPSF2-205ENST00000556622 C2orf49Q9BVC5 232 aaPredicted RBP7.88□□□□□ -1.15
CPSF2-205ENST00000556622 PANK3Q9H999 370 aa7.88□□□□□ -1.15
CPSF2-205ENST00000556622 SETD1AO15047 1707 aaKnown RBP7.88□□□□□ -1.15
CPSF2-205ENST00000556622 BLMP54132 1417 aaPredicted RBP7.87□□□□□ -1.15
CPSF2-205ENST00000556622 MST1RQ04912 1400 aa7.87□□□□□ -1.15
CPSF2-205ENST00000556622 JCADQ9P266 1359 aa7.87□□□□□ -1.15
CPSF2-205ENST00000556622 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.87□□□□□ -1.15
CPSF2-205ENST00000556622 SERTM1A2A2V5 107 aa7.87□□□□□ -1.15
CPSF2-205ENST00000556622 FAM229AH3BQW9 127 aa7.87□□□□□ -1.15
CPSF2-205ENST00000556622 IGFBP4P22692 258 aa7.87□□□□□ -1.15
CPSF2-205ENST00000556622 SWI5Q1ZZU3 235 aa7.87□□□□□ -1.15
CPSF2-205ENST00000556622 TESK2Q96S53 571 aa7.87□□□□□ -1.15
CPSF2-205ENST00000556622 ZIC5Q96T25 663 aa7.87□□□□□ -1.15
CPSF2-205ENST00000556622 ZMIZ1Q9ULJ6 1067 aa7.87□□□□□ -1.15
CPSF2-205ENST00000556622 NOVA2Q9UNW9 492 aaKnown RBP7.87□□□□□ -1.15
CPSF2-205ENST00000556622 C1orf167Q5SNV9 1468 aa7.87□□□□□ -1.15
CPSF2-205ENST00000556622 TECPR2O15040 1411 aa7.86□□□□□ -1.15
CPSF2-205ENST00000556622 PHLPP1O60346 1717 aa7.86□□□□□ -1.15
CPSF2-205ENST00000556622 DCDC2BA2VCK2 349 aa7.86□□□□□ -1.15
CPSF2-205ENST00000556622 PPM1GO15355 546 aaPredicted RBP7.86□□□□□ -1.15
CPSF2-205ENST00000556622 PCBP4P57723 403 aaKnown RBP7.86□□□□□ -1.15
CPSF2-205ENST00000556622 XPCQ01831 940 aaPredicted RBP7.86□□□□□ -1.15
CPSF2-205ENST00000556622 KRT28Q7Z3Y7 464 aa7.86□□□□□ -1.15
CPSF2-205ENST00000556622 PMFBP1Q8TBY8 1022 aa7.86□□□□□ -1.15
CPSF2-205ENST00000556622 PCDHGC4Q9Y5F7 938 aa7.86□□□□□ -1.15
CPSF2-205ENST00000556622 SBNO2Q9Y2G9 1366 aa7.85□□□□□ -1.15
CPSF2-205ENST00000556622 NPHP3Q7Z494 1330 aa7.85□□□□□ -1.15
CPSF2-205ENST00000556622 TXLNAP40222 546 aa7.85□□□□□ -1.15
CPSF2-205ENST00000556622 TBCELQ5QJ74 424 aa7.85□□□□□ -1.15
CPSF2-205ENST00000556622 SAMD5Q5TGI4 173 aa7.85□□□□□ -1.15
CPSF2-205ENST00000556622 ILDR2Q71H61 639 aa7.85□□□□□ -1.15
CPSF2-205ENST00000556622 CENPQQ7L2Z9 268 aaPredicted RBP7.85□□□□□ -1.15
CPSF2-205ENST00000556622 NGDNQ8NEJ9 315 aaKnown RBP7.85□□□□□ -1.15
CPSF2-205ENST00000556622 CDK19Q9BWU1 502 aa7.85□□□□□ -1.15
CPSF2-205ENST00000556622 SPATA31A6Q5VVP1 1343 aa7.84□□□□□ -1.15
CPSF2-205ENST00000556622 ASXL1Q8IXJ9 1541 aa7.84□□□□□ -1.15
CPSF2-205ENST00000556622 NALCNQ8IZF0 1738 aa7.84□□□□□ -1.15
CPSF2-205ENST00000556622 A0A1W2PNR3 127 aa7.84□□□□□ -1.15
CPSF2-205ENST00000556622 TATP17735 454 aaPredicted RBP7.84□□□□□ -1.15
CPSF2-205ENST00000556622 LRP8Q14114 963 aa7.84□□□□□ -1.15
CPSF2-205ENST00000556622 FIGNL1Q6PIW4 674 aa7.84□□□□□ -1.15
CPSF2-205ENST00000556622 SCG3Q8WXD2 468 aaKnown RBP7.84□□□□□ -1.15
CPSF2-205ENST00000556622 AIDAQ96BJ3 306 aa7.84□□□□□ -1.15
CPSF2-205ENST00000556622 NUDT16Q96DE0 195 aaKnown RBP7.84□□□□□ -1.15
CPSF2-205ENST00000556622 HINFPQ9BQA5 517 aa7.84□□□□□ -1.15
CPSF2-205ENST00000556622 PNNQ9H307 717 aaKnown RBP7.84□□□□□ -1.15
CPSF2-205ENST00000556622 PARP3Q9Y6F1 533 aa7.84□□□□□ -1.15
CPSF2-205ENST00000556622 CENPJQ9HC77 1338 aaPredicted RBP7.83□□□□□ -1.16
CPSF2-205ENST00000556622 E9PSI1 815 aa7.83□□□□□ -1.16
CPSF2-205ENST00000556622 ATXN7O15265 892 aaPredicted RBP7.83□□□□□ -1.16
CPSF2-205ENST00000556622 HYAL3O43820 417 aaPredicted RBP7.83□□□□□ -1.16
CPSF2-205ENST00000556622 PPP1R12BO60237 982 aaPredicted RBP7.83□□□□□ -1.16
CPSF2-205ENST00000556622 MAPTP10636 758 aaKnown RBP7.83□□□□□ -1.16
CPSF2-205ENST00000556622 CC2D1BQ5T0F9 858 aaKnown RBP7.83□□□□□ -1.16
CPSF2-205ENST00000556622 SH3PXD2AQ5TCZ1 1133 aa7.83□□□□□ -1.16
CPSF2-205ENST00000556622 CFAP53Q96M91 514 aa7.83□□□□□ -1.16
CPSF2-205ENST00000556622 DLC1Q96QB1 1528 aa7.83□□□□□ -1.16
CPSF2-205ENST00000556622 ADGRB1O14514 1584 aa7.82□□□□□ -1.16
CPSF2-205ENST00000556622 EIF5BO60841 1220 aaKnown RBP7.82□□□□□ -1.16
CPSF2-205ENST00000556622 APBA3O96018 575 aa7.82□□□□□ -1.16
CPSF2-205ENST00000556622 PPP2R1AP30153 589 aa7.82□□□□□ -1.16
CPSF2-205ENST00000556622 TNP2Q05952 138 aa7.82□□□□□ -1.16
CPSF2-205ENST00000556622 OCLNQ16625 522 aa7.82□□□□□ -1.16
CPSF2-205ENST00000556622 KNDC1Q76NI1 1749 aa7.82□□□□□ -1.16
CPSF2-205ENST00000556622 NGLY1Q96IV0 654 aa7.82□□□□□ -1.16
CPSF2-205ENST00000556622 CHMP3Q9Y3E7 222 aa7.82□□□□□ -1.16
CPSF2-205ENST00000556622 AHDC1Q5TGY3 1603 aaPredicted RBP7.81□□□□□ -1.16
CPSF2-205ENST00000556622 PRRT3Q5FWE3 981 aa7.81□□□□□ -1.16
CPSF2-205ENST00000556622 FAM182BQ5T319 152 aa7.81□□□□□ -1.16
CPSF2-205ENST00000556622 ZNF772Q68DY9 489 aaPredicted RBP7.81□□□□□ -1.16
CPSF2-205ENST00000556622 STK32AQ8WU08 396 aa7.81□□□□□ -1.16
CPSF2-205ENST00000556622 CLP1Q92989 425 aaKnown RBP7.81□□□□□ -1.16
CPSF2-205ENST00000556622 AVENQ9NQS1 362 aaPredicted RBP7.81□□□□□ -1.16
CPSF2-205ENST00000556622 RGS17Q9UGC6 210 aaPredicted RBP7.81□□□□□ -1.16
CPSF2-205ENST00000556622 ZNF232Q9UNY5 417 aa7.81□□□□□ -1.16
CPSF2-205ENST00000556622 NSD2O96028 1365 aa7.81□□□□□ -1.16
CPSF2-205ENST00000556622 CGNL1Q0VF96 1302 aa7.8□□□□□ -1.16
CPSF2-205ENST00000556622 MED1Q15648 1581 aaPredicted RBP7.8□□□□□ -1.16
CPSF2-205ENST00000556622 RGPD8O14715 1765 aaPredicted RBP7.8□□□□□ -1.16
CPSF2-205ENST00000556622 KHNYNO15037 678 aaKnown RBP7.8□□□□□ -1.16
CPSF2-205ENST00000556622 CT47B1P0C2W7 299 aaPredicted RBP7.8□□□□□ -1.16
CPSF2-205ENST00000556622 FAM157BP0CG42 384 aa7.8□□□□□ -1.16
CPSF2-205ENST00000556622 LAMC2Q13753 1193 aa7.8□□□□□ -1.16
CPSF2-205ENST00000556622 CNGB1Q14028 1251 aaPredicted RBP7.8□□□□□ -1.16
CPSF2-205ENST00000556622 COL9A3Q14050 684 aaPredicted RBP7.8□□□□□ -1.16
CPSF2-205ENST00000556622 PDE3AQ14432 1141 aa7.8□□□□□ -1.16
CPSF2-205ENST00000556622 TMEM164Q5U3C3 297 aa7.8□□□□□ -1.16
CPSF2-205ENST00000556622 ZNF468Q5VIY5 522 aaPredicted RBP7.8□□□□□ -1.16
CPSF2-205ENST00000556622 C8orf37Q96NL8 207 aa7.8□□□□□ -1.16
CPSF2-205ENST00000556622 COL16A1Q07092 1604 aaPredicted RBP7.8□□□□□ -1.16
CPSF2-205ENST00000556622 CDC42BPGQ6DT37 1551 aa7.8□□□□□ -1.16
CPSF2-205ENST00000556622 SPATA31A3Q5VYP0 1347 aa7.79□□□□□ -1.16
CPSF2-205ENST00000556622 EVC2Q86UK5 1308 aa7.79□□□□□ -1.16
CPSF2-205ENST00000556622 PRR36Q9H6K5 1346 aa7.79□□□□□ -1.16
CPSF2-205ENST00000556622 EFSO43281 561 aa7.79□□□□□ -1.16
CPSF2-205ENST00000556622 GRIK4Q16099 956 aa7.79□□□□□ -1.16
CPSF2-205ENST00000556622 ARSJQ5FYB0 599 aaPredicted RBP7.79□□□□□ -1.16
CPSF2-205ENST00000556622 ALDH16A1Q8IZ83 802 aa7.79□□□□□ -1.16
CPSF2-205ENST00000556622 COL26A1Q96A83 441 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms