RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 CEP85Q6P2H3 762 aa10.05□□□□□ -0.8
VTI1B-206ENST00000556461 TBC1D22AQ8WUA7 517 aa10.05□□□□□ -0.8
VTI1B-206ENST00000556461 COG6Q9Y2V7 657 aa10.05□□□□□ -0.8
VTI1B-206ENST00000556461 ARAP2Q8WZ64 1704 aa10.04□□□□□ -0.8
VTI1B-206ENST00000556461 SLC10A3P09131 477 aa10.04□□□□□ -0.8
VTI1B-206ENST00000556461 HSPA8P11142 646 aaKnown RBP10.04□□□□□ -0.8
VTI1B-206ENST00000556461 PRDX5P30044 214 aa10.04□□□□□ -0.8
VTI1B-206ENST00000556461 MAP2K2P36507 400 aa10.04□□□□□ -0.8
VTI1B-206ENST00000556461 CACNB3P54284 484 aa10.04□□□□□ -0.8
VTI1B-206ENST00000556461 G3BP1Q13283 466 aaKnown RBP eCLIP10.04□□□□□ -0.8
VTI1B-206ENST00000556461 RASGRF1Q13972 1273 aa10.04□□□□□ -0.8
VTI1B-206ENST00000556461 RASA3Q14644 834 aa10.04□□□□□ -0.8
VTI1B-206ENST00000556461 MVPQ14764 893 aaKnown RBP10.04□□□□□ -0.8
VTI1B-206ENST00000556461 DIXDC1Q155Q3 683 aa10.04□□□□□ -0.8
VTI1B-206ENST00000556461 NBPF12Q5TAG4 269 aaPredicted RBP10.04□□□□□ -0.8
VTI1B-206ENST00000556461 APOBEC3HQ6NTF7 200 aaKnown RBP10.04□□□□□ -0.8
VTI1B-206ENST00000556461 RASAL3Q86YV0 1011 aa10.04□□□□□ -0.8
VTI1B-206ENST00000556461 WDR66Q8TBY9 1149 aa10.04□□□□□ -0.8
VTI1B-206ENST00000556461 NEUROD6Q96NK8 337 aa10.04□□□□□ -0.8
VTI1B-206ENST00000556461 TSKSQ9UJT2 592 aa10.04□□□□□ -0.8
VTI1B-206ENST00000556461 PAPPA2Q9BXP8 1791 aa10.03□□□□□ -0.8
VTI1B-206ENST00000556461 TCP10L2B9ZVM9 353 aa10.03□□□□□ -0.8
VTI1B-206ENST00000556461 MYO1BO43795 1136 aa10.03□□□□□ -0.8
VTI1B-206ENST00000556461 SURF6O75683 361 aaKnown RBP10.03□□□□□ -0.8
VTI1B-206ENST00000556461 LBX1P52954 281 aa10.03□□□□□ -0.8
VTI1B-206ENST00000556461 FKBP1BP68106 108 aa10.03□□□□□ -0.8
VTI1B-206ENST00000556461 HDLBPQ00341 1268 aaKnown RBP10.03□□□□□ -0.8
VTI1B-206ENST00000556461 KIF23Q02241 960 aaPredicted RBP10.03□□□□□ -0.8
VTI1B-206ENST00000556461 MAP2K1Q02750 393 aaPredicted RBP10.03□□□□□ -0.8
VTI1B-206ENST00000556461 TTLL12Q14166 644 aaPredicted RBP10.03□□□□□ -0.8
VTI1B-206ENST00000556461 PI16Q6UXB8 463 aa10.03□□□□□ -0.8
VTI1B-206ENST00000556461 TEKT1Q969V4 418 aa10.03□□□□□ -0.8
VTI1B-206ENST00000556461 AIDAQ96BJ3 306 aa10.03□□□□□ -0.8
VTI1B-206ENST00000556461 ZDHHC15Q96MV8 337 aa10.03□□□□□ -0.8
VTI1B-206ENST00000556461 TEPSINQ96N21 525 aa10.03□□□□□ -0.8
VTI1B-206ENST00000556461 DENND2AQ9ULE3 1009 aa10.03□□□□□ -0.8
VTI1B-206ENST00000556461 AKAP2Q9Y2D5 859 aa10.03□□□□□ -0.8
VTI1B-206ENST00000556461 NOP58Q9Y2X3 529 aaKnown RBP10.03□□□□□ -0.8
VTI1B-206ENST00000556461 SUGT1Q9Y2Z0 365 aa10.03□□□□□ -0.8
VTI1B-206ENST00000556461 ZBTB22O15209 634 aa10.02□□□□□ -0.81
VTI1B-206ENST00000556461 CTCFP49711 727 aaPredicted RBP10.02□□□□□ -0.81
VTI1B-206ENST00000556461 NOGQ13253 232 aa10.02□□□□□ -0.81
VTI1B-206ENST00000556461 TNNI3KQ59H18 835 aa10.02□□□□□ -0.81
VTI1B-206ENST00000556461 SIRT2Q8IXJ6 389 aa10.02□□□□□ -0.81
VTI1B-206ENST00000556461 CCDC102AQ96A19 550 aa10.02□□□□□ -0.81
VTI1B-206ENST00000556461 YTHDC1Q96MU7 727 aaKnown RBP10.02□□□□□ -0.81
VTI1B-206ENST00000556461 DBNDD2Q9BQY9 259 aa10.02□□□□□ -0.81
VTI1B-206ENST00000556461 MRIQ9BWK5 157 aa10.02□□□□□ -0.81
VTI1B-206ENST00000556461 TMEM39BQ9GZU3 492 aa10.02□□□□□ -0.81
VTI1B-206ENST00000556461 ZBTB40Q9NUA8 1239 aa10.02□□□□□ -0.81
VTI1B-206ENST00000556461 GNL3LQ9NVN8 582 aaKnown RBP10.02□□□□□ -0.81
VTI1B-206ENST00000556461 HMG20BQ9P0W2 317 aa10.02□□□□□ -0.81
VTI1B-206ENST00000556461 ANGEL1Q9UNK9 670 aaKnown RBP10.02□□□□□ -0.81
VTI1B-206ENST00000556461 DAGLAQ9Y4D2 1042 aa10.02□□□□□ -0.81
VTI1B-206ENST00000556461 FPGT-TNNI3KV9GXZ4 949 aa10.02□□□□□ -0.81
VTI1B-206ENST00000556461 SALL1Q9NSC2 1324 aa10.02□□□□□ -0.81
VTI1B-206ENST00000556461 SEMA3EO15041 775 aa10.01□□□□□ -0.81
VTI1B-206ENST00000556461 LDHBP07195 334 aaKnown RBP10.01□□□□□ -0.81
VTI1B-206ENST00000556461 NF2P35240 595 aa10.01□□□□□ -0.81
VTI1B-206ENST00000556461 MKRN3Q13064 507 aaKnown RBP10.01□□□□□ -0.81
VTI1B-206ENST00000556461 OS9Q13438 667 aaPredicted RBP10.01□□□□□ -0.81
VTI1B-206ENST00000556461 LDLRAD1Q5T700 205 aa10.01□□□□□ -0.81
VTI1B-206ENST00000556461 HHIPL2Q6UWX4 724 aa10.01□□□□□ -0.81
VTI1B-206ENST00000556461 TBC1D9Q6ZT07 1266 aa10.01□□□□□ -0.81
VTI1B-206ENST00000556461 ZNF384Q8TF68 577 aa10.01□□□□□ -0.81
VTI1B-206ENST00000556461 CLMNQ96JQ2 1002 aa10.01□□□□□ -0.81
VTI1B-206ENST00000556461 TLR7Q9NYK1 1049 aaKnown RBP10.01□□□□□ -0.81
VTI1B-206ENST00000556461 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.01□□□□□ -0.81
VTI1B-206ENST00000556461 EXOC6BQ9Y2D4 811 aa10.01□□□□□ -0.81
VTI1B-206ENST00000556461 PPP2R3BQ9Y5P8 575 aa10.01□□□□□ -0.81
VTI1B-206ENST00000556461 ECM29Q5VYK3 1845 aa10□□□□□ -0.81
VTI1B-206ENST00000556461 USP2O75604 605 aaPredicted RBP10□□□□□ -0.81
VTI1B-206ENST00000556461 MS4A1P11836 297 aa10□□□□□ -0.81
VTI1B-206ENST00000556461 ARID4AP29374 1257 aaPredicted RBP10□□□□□ -0.81
VTI1B-206ENST00000556461 MCAMP43121 646 aa10□□□□□ -0.81
VTI1B-206ENST00000556461 NFIAQ12857 509 aa10□□□□□ -0.81
VTI1B-206ENST00000556461 MAP3K11Q16584 847 aa10□□□□□ -0.81
VTI1B-206ENST00000556461 CDC42EP5Q6NZY7 148 aa10□□□□□ -0.81
VTI1B-206ENST00000556461 ARMC9Q7Z3E5 817 aa10□□□□□ -0.81
VTI1B-206ENST00000556461 EAF2Q96CJ1 260 aaPredicted RBP10□□□□□ -0.81
VTI1B-206ENST00000556461 CSRNP1Q96S65 589 aa10□□□□□ -0.81
VTI1B-206ENST00000556461 CCDC8Q9H0W5 538 aaPredicted RBP10□□□□□ -0.81
VTI1B-206ENST00000556461 GPR108Q9NPR9 543 aa10□□□□□ -0.81
VTI1B-206ENST00000556461 SNRKQ9NRH2 765 aa10□□□□□ -0.81
VTI1B-206ENST00000556461 DBNLQ9UJU6 430 aaKnown RBP10□□□□□ -0.81
VTI1B-206ENST00000556461 DDX19BQ9UMR2 479 aa10□□□□□ -0.81
VTI1B-206ENST00000556461 MAST3O60307 1309 aa10□□□□□ -0.81
VTI1B-206ENST00000556461 PDS5AQ29RF7 1337 aaKnown RBP10□□□□□ -0.81
VTI1B-206ENST00000556461 MYH13Q9UKX3 1938 aa9.99□□□□□ -0.81
VTI1B-206ENST00000556461 TNFAIP1Q13829 316 aa9.99□□□□□ -0.81
VTI1B-206ENST00000556461 PDE3AQ14432 1141 aa9.99□□□□□ -0.81
VTI1B-206ENST00000556461 SUPT20HL1Q3ZLR7 823 aa9.99□□□□□ -0.81
VTI1B-206ENST00000556461 GORABQ5T7V8 394 aa9.99□□□□□ -0.81
VTI1B-206ENST00000556461 ZFPM1Q8IX07 1006 aa9.99□□□□□ -0.81
VTI1B-206ENST00000556461 SPATA5Q8NB90 893 aa9.99□□□□□ -0.81
VTI1B-206ENST00000556461 PRDM10Q9NQV6 1147 aa9.99□□□□□ -0.81
VTI1B-206ENST00000556461 USP40Q9NVE5 1235 aa9.99□□□□□ -0.81
VTI1B-206ENST00000556461 FAM198AQ9UFP1 575 aa9.99□□□□□ -0.81
VTI1B-206ENST00000556461 ABCF2Q9UG63 623 aa9.99□□□□□ -0.81
VTI1B-206ENST00000556461 GAKO14976 1311 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms