RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 IREB2P48200 963 aaKnown RBP28.25■■■□□ 2.11
ACTN1-220ENST00000556433 TCP10L2B9ZVM9 353 aa28.24■■■□□ 2.11
ACTN1-220ENST00000556433 ZNF296Q8WUU4 475 aaPredicted RBP28.24■■■□□ 2.11
ACTN1-220ENST00000556433 ECM29Q5VYK3 1845 aa28.24■■■□□ 2.11
ACTN1-220ENST00000556433 KIF16BQ96L93 1317 aa28.23■■■□□ 2.11
ACTN1-220ENST00000556433 MANSC4A6NHS7 340 aaPredicted RBP28.23■■■□□ 2.11
ACTN1-220ENST00000556433 SLC5A1P13866 664 aa28.23■■■□□ 2.11
ACTN1-220ENST00000556433 RGS19P49795 217 aa28.23■■■□□ 2.11
ACTN1-220ENST00000556433 HDLBPQ00341 1268 aaKnown RBP28.23■■■□□ 2.11
ACTN1-220ENST00000556433 WNK4Q96J92 1243 aa28.23■■■□□ 2.11
ACTN1-220ENST00000556433 ZBTB48P10074 688 aaPredicted RBP28.22■■■□□ 2.11
ACTN1-220ENST00000556433 INHBEP58166 350 aa28.22■■■□□ 2.11
ACTN1-220ENST00000556433 ATG9AQ7Z3C6 839 aa28.22■■■□□ 2.11
ACTN1-220ENST00000556433 LPIN2Q92539 896 aa28.22■■■□□ 2.11
ACTN1-220ENST00000556433 TEKT1Q969V4 418 aa28.22■■■□□ 2.11
ACTN1-220ENST00000556433 HDAC5Q9UQL6 1122 aa28.22■■■□□ 2.11
ACTN1-220ENST00000556433 GPR25O00155 361 aa28.21■■■□□ 2.11
ACTN1-220ENST00000556433 TNNI2P48788 182 aa28.21■■■□□ 2.11
ACTN1-220ENST00000556433 RARSP54136 660 aaKnown RBP28.21■■■□□ 2.11
ACTN1-220ENST00000556433 SIL1Q9H173 461 aa28.21■■■□□ 2.11
ACTN1-220ENST00000556433 MLLT1Q03111 559 aaPredicted RBP28.2■■■□□ 2.1
ACTN1-220ENST00000556433 ANKRD13AQ8IZ07 590 aa28.2■■■□□ 2.1
ACTN1-220ENST00000556433 TEPSINQ96N21 525 aa28.2■■■□□ 2.1
ACTN1-220ENST00000556433 MRIQ9BWK5 157 aa28.2■■■□□ 2.1
ACTN1-220ENST00000556433 FBXO3Q9UK99 471 aa28.2■■■□□ 2.1
ACTN1-220ENST00000556433 LRRFIP2Q9Y608 721 aaKnown RBP28.2■■■□□ 2.1
ACTN1-220ENST00000556433 ALDH1A1P00352 501 aa28.19■■■□□ 2.1
ACTN1-220ENST00000556433 NOM1Q5C9Z4 860 aaKnown RBP28.19■■■□□ 2.1
ACTN1-220ENST00000556433 CDAN1Q8IWY9 1227 aa28.19■■■□□ 2.1
ACTN1-220ENST00000556433 CFHR5Q9BXR6 569 aa28.19■■■□□ 2.1
ACTN1-220ENST00000556433 TMEM39BQ9GZU3 492 aa28.19■■■□□ 2.1
ACTN1-220ENST00000556433 R3HDMLQ9H3Y0 253 aa28.19■■■□□ 2.1
ACTN1-220ENST00000556433 CEP126Q9P2H0 1117 aa28.19■■■□□ 2.1
ACTN1-220ENST00000556433 SUGT1Q9Y2Z0 365 aa28.19■■■□□ 2.1
ACTN1-220ENST00000556433 CIAO1O76071 339 aa28.18■■■□□ 2.1
ACTN1-220ENST00000556433 IFNL1Q8IU54 200 aa28.18■■■□□ 2.1
ACTN1-220ENST00000556433 ARHGAP45Q92619 1136 aa28.17■■■□□ 2.1
ACTN1-220ENST00000556433 ZDHHC15Q96MV8 337 aa28.17■■■□□ 2.1
ACTN1-220ENST00000556433 MAST3O60307 1309 aa28.17■■■□□ 2.1
ACTN1-220ENST00000556433 CACNB3P54284 484 aa28.16■■■□□ 2.1
ACTN1-220ENST00000556433 PKN2Q16513 984 aaKnown RBP28.16■■■□□ 2.1
ACTN1-220ENST00000556433 ATP2B3Q16720 1220 aa28.16■■■□□ 2.1
ACTN1-220ENST00000556433 WDR66Q8TBY9 1149 aa28.16■■■□□ 2.1
ACTN1-220ENST00000556433 MEIS3Q99687 375 aa28.16■■■□□ 2.1
ACTN1-220ENST00000556433 FKTNO75072 461 aa28.15■■■□□ 2.1
ACTN1-220ENST00000556433 GJA5P36382 358 aa28.15■■■□□ 2.1
ACTN1-220ENST00000556433 IL15P40933 162 aaPredicted RBP28.15■■■□□ 2.1
ACTN1-220ENST00000556433 APOBEC3HQ6NTF7 200 aaKnown RBP28.15■■■□□ 2.1
ACTN1-220ENST00000556433 ELP3Q9H9T3 547 aa28.15■■■□□ 2.1
ACTN1-220ENST00000556433 TMOD2Q9NZR1 351 aa28.15■■■□□ 2.1
ACTN1-220ENST00000556433 PA2G4Q9UQ80 394 aaKnown RBP28.15■■■□□ 2.1
ACTN1-220ENST00000556433 HHIPL2Q6UWX4 724 aa28.14■■■□□ 2.1
ACTN1-220ENST00000556433 ARAP2Q8WZ64 1704 aa28.14■■■□□ 2.1
ACTN1-220ENST00000556433 IGF2BP3O00425 579 aaKnown RBP eCLIP28.13■■■□□ 2.09
ACTN1-220ENST00000556433 MAP3K9P80192 1104 aa28.13■■■□□ 2.09
ACTN1-220ENST00000556433 INTS3Q68E01 1043 aaKnown RBP28.13■■■□□ 2.09
ACTN1-220ENST00000556433 GNL3LQ9NVN8 582 aaKnown RBP28.13■■■□□ 2.09
ACTN1-220ENST00000556433 OTUD7BQ6GQQ9 843 aa28.12■■■□□ 2.09
ACTN1-220ENST00000556433 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.12■■■□□ 2.09
ACTN1-220ENST00000556433 OPTNQ96CV9 577 aa28.12■■■□□ 2.09
ACTN1-220ENST00000556433 COPRSQ9NQ92 184 aa28.12■■■□□ 2.09
ACTN1-220ENST00000556433 HPS5Q9UPZ3 1129 aa28.12■■■□□ 2.09
ACTN1-220ENST00000556433 GNAI3P08754 354 aa28.11■■■□□ 2.09
ACTN1-220ENST00000556433 FKBP1CQ5VVH2 108 aa28.11■■■□□ 2.09
ACTN1-220ENST00000556433 IPO8O15397 1037 aaKnown RBP28.1■■■□□ 2.09
ACTN1-220ENST00000556433 SOX10P56693 466 aa28.1■■■□□ 2.09
ACTN1-220ENST00000556433 FAM83AQ86UY5 434 aa28.1■■■□□ 2.09
ACTN1-220ENST00000556433 VGLL4Q14135 290 aa28.09■■■□□ 2.09
ACTN1-220ENST00000556433 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.09■■■□□ 2.09
ACTN1-220ENST00000556433 CSADQ9Y600 493 aa28.09■■■□□ 2.09
ACTN1-220ENST00000556433 TESPA1A2RU30 521 aaPredicted RBP28.08■■■□□ 2.09
ACTN1-220ENST00000556433 PHKA1P46020 1223 aa28.08■■■□□ 2.09
ACTN1-220ENST00000556433 CNKSR2Q8WXI2 1034 aa28.08■■■□□ 2.09
ACTN1-220ENST00000556433 PTPN18Q99952 460 aa28.08■■■□□ 2.09
ACTN1-220ENST00000556433 SRGAP3O43295 1099 aa28.07■■■□□ 2.08
ACTN1-220ENST00000556433 BCAR3O75815 825 aa28.07■■■□□ 2.08
ACTN1-220ENST00000556433 FRAT1Q92837 279 aaPredicted RBP28.07■■■□□ 2.08
ACTN1-220ENST00000556433 HOOK2Q96ED9 719 aa28.07■■■□□ 2.08
ACTN1-220ENST00000556433 DENND2AQ9ULE3 1009 aa28.07■■■□□ 2.08
ACTN1-220ENST00000556433 SEMA3EO15041 775 aa28.06■■■□□ 2.08
ACTN1-220ENST00000556433 LDHBP07195 334 aaKnown RBP28.06■■■□□ 2.08
ACTN1-220ENST00000556433 PRDX5P30044 214 aa28.06■■■□□ 2.08
ACTN1-220ENST00000556433 ADORA1P30542 326 aa28.06■■■□□ 2.08
ACTN1-220ENST00000556433 DIXDC1Q155Q3 683 aa28.06■■■□□ 2.08
ACTN1-220ENST00000556433 FBXO46Q6PJ61 603 aaPredicted RBP28.06■■■□□ 2.08
ACTN1-220ENST00000556433 MS4A4AQ96JQ5 239 aa28.06■■■□□ 2.08
ACTN1-220ENST00000556433 TRIM27P14373 513 aa28.05■■■□□ 2.08
ACTN1-220ENST00000556433 TIMM10P62072 90 aa28.05■■■□□ 2.08
ACTN1-220ENST00000556433 DAGLAQ9Y4D2 1042 aa28.05■■■□□ 2.08
ACTN1-220ENST00000556433 CRHR2Q13324 411 aa28.04■■■□□ 2.08
ACTN1-220ENST00000556433 CCDC102BQ68D86 513 aa28.04■■■□□ 2.08
ACTN1-220ENST00000556433 CDC42EP5Q6NZY7 148 aa28.04■■■□□ 2.08
ACTN1-220ENST00000556433 ATF7IPQ6VMQ6 1270 aa28.04■■■□□ 2.08
ACTN1-220ENST00000556433 OTUD5Q96G74 571 aa28.04■■■□□ 2.08
ACTN1-220ENST00000556433 TNNQ9UQP3 1299 aa28.04■■■□□ 2.08
ACTN1-220ENST00000556433 SALL1Q9NSC2 1324 aa28.03■■■□□ 2.08
ACTN1-220ENST00000556433 GTF2A2P52657 109 aa28.03■■■□□ 2.08
ACTN1-220ENST00000556433 DCAF15Q66K64 600 aa28.03■■■□□ 2.08
ACTN1-220ENST00000556433 FAM151AQ8WW52 585 aa28.03■■■□□ 2.08
ACTN1-220ENST00000556433 WRNIP1Q96S55 665 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms