RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 MAST3O60307 1309 aa24.7■■□□□ 1.54
RCCD1-205ENST00000556333 PDS5AQ29RF7 1337 aaKnown RBP24.7■■□□□ 1.54
RCCD1-205ENST00000556333 LDHBP07195 334 aaKnown RBP24.7■■□□□ 1.54
RCCD1-205ENST00000556333 CFAP100Q494V2 611 aa24.7■■□□□ 1.54
RCCD1-205ENST00000556333 SALL1Q9NSC2 1324 aa24.69■■□□□ 1.54
RCCD1-205ENST00000556333 ZC3H15Q8WU90 426 aaKnown RBP24.69■■□□□ 1.54
RCCD1-205ENST00000556333 DCPSQ96C86 337 aaKnown RBP24.69■■□□□ 1.54
RCCD1-205ENST00000556333 SUGT1Q9Y2Z0 365 aa24.69■■□□□ 1.54
RCCD1-205ENST00000556333 TRPM7Q96QT4 1865 aa24.68■■□□□ 1.54
RCCD1-205ENST00000556333 ZBTB22O15209 634 aa24.68■■□□□ 1.54
RCCD1-205ENST00000556333 IGHDP01880 384 aa24.68■■□□□ 1.54
RCCD1-205ENST00000556333 NEFLP07196 543 aa24.68■■□□□ 1.54
RCCD1-205ENST00000556333 PRDX5P30044 214 aa24.68■■□□□ 1.54
RCCD1-205ENST00000556333 NBPF9Q3BBW0 867 aa24.68■■□□□ 1.54
RCCD1-205ENST00000556333 ANKRD45Q5TZF3 282 aa24.68■■□□□ 1.54
RCCD1-205ENST00000556333 SPTY2D1Q68D10 685 aaPredicted RBP24.68■■□□□ 1.54
RCCD1-205ENST00000556333 CNTROBQ8N137 903 aa24.68■■□□□ 1.54
RCCD1-205ENST00000556333 ZNF512BQ96KM6 892 aaPredicted RBP24.68■■□□□ 1.54
RCCD1-205ENST00000556333 GGA3Q9NZ52 723 aa24.68■■□□□ 1.54
RCCD1-205ENST00000556333 WNT10BO00744 389 aa24.67■■□□□ 1.54
RCCD1-205ENST00000556333 CRKP46108 304 aa24.67■■□□□ 1.54
RCCD1-205ENST00000556333 ERICH6Q7L0X2 663 aa24.67■■□□□ 1.54
RCCD1-205ENST00000556333 MYO1BO43795 1136 aa24.66■■□□□ 1.54
RCCD1-205ENST00000556333 ANGEL2Q5VTE6 544 aaKnown RBP24.66■■□□□ 1.54
RCCD1-205ENST00000556333 TBC1D9Q6ZT07 1266 aa24.66■■□□□ 1.54
RCCD1-205ENST00000556333 DZIP1Q86YF9 867 aaKnown RBP24.66■■□□□ 1.54
RCCD1-205ENST00000556333 TEKT1Q969V4 418 aa24.66■■□□□ 1.54
RCCD1-205ENST00000556333 SERPINA10Q9UK55 444 aa24.66■■□□□ 1.54
RCCD1-205ENST00000556333 PCDHAC2Q9Y5I4 1007 aa24.66■■□□□ 1.54
RCCD1-205ENST00000556333 MAST2Q6P0Q8 1798 aa24.66■■□□□ 1.54
RCCD1-205ENST00000556333 ASTN2O75129 1339 aaPredicted RBP24.65■■□□□ 1.54
RCCD1-205ENST00000556333 ZAP70P43403 619 aa24.65■■□□□ 1.54
RCCD1-205ENST00000556333 B4GALNT3Q6L9W6 998 aa24.65■■□□□ 1.54
RCCD1-205ENST00000556333 LRP2BPQ9P2M1 347 aa24.65■■□□□ 1.54
RCCD1-205ENST00000556333 PGAP2Q9UHJ9 254 aa24.65■■□□□ 1.54
RCCD1-205ENST00000556333 DOCK2Q92608 1830 aa24.65■■□□□ 1.54
RCCD1-205ENST00000556333 MTMR14Q8NCE2 650 aa24.64■■□□□ 1.54
RCCD1-205ENST00000556333 GPATCH3Q96I76 525 aa24.64■■□□□ 1.54
RCCD1-205ENST00000556333 RAI14Q9P0K7 980 aa24.64■■□□□ 1.54
RCCD1-205ENST00000556333 SPDYE2BA6NHP3 402 aa24.63■■□□□ 1.53
RCCD1-205ENST00000556333 SPDYE6P0CI01 402 aa24.63■■□□□ 1.53
RCCD1-205ENST00000556333 HDLBPQ00341 1268 aaKnown RBP24.63■■□□□ 1.53
RCCD1-205ENST00000556333 CDC37L1Q7L3B6 337 aa24.63■■□□□ 1.53
RCCD1-205ENST00000556333 PRMT6Q96LA8 375 aaPredicted RBP24.63■■□□□ 1.53
RCCD1-205ENST00000556333 GLIS2Q9BZE0 524 aaPredicted RBP24.63■■□□□ 1.53
RCCD1-205ENST00000556333 NDUFB9Q9Y6M9 179 aa24.63■■□□□ 1.53
RCCD1-205ENST00000556333 CYP2E1P05181 493 aaPredicted RBP24.62■■□□□ 1.53
RCCD1-205ENST00000556333 DIXDC1Q155Q3 683 aa24.62■■□□□ 1.53
RCCD1-205ENST00000556333 KRT26Q7Z3Y9 468 aa24.62■■□□□ 1.53
RCCD1-205ENST00000556333 USP48Q86UV5 1035 aa24.62■■□□□ 1.53
RCCD1-205ENST00000556333 SULF1Q8IWU6 871 aa24.62■■□□□ 1.53
RCCD1-205ENST00000556333 DNAJC2Q99543 621 aaKnown RBP24.62■■□□□ 1.53
RCCD1-205ENST00000556333 SCAF8Q9UPN6 1271 aaKnown RBP24.62■■□□□ 1.53
RCCD1-205ENST00000556333 MYH7P12883 1935 aa24.61■■□□□ 1.53
RCCD1-205ENST00000556333 CLRN2A0PK11 232 aa24.61■■□□□ 1.53
RCCD1-205ENST00000556333 ITGBL1O95965 494 aaPredicted RBP24.61■■□□□ 1.53
RCCD1-205ENST00000556333 SLF2Q8IX21 1173 aa24.61■■□□□ 1.53
RCCD1-205ENST00000556333 SMC5Q8IY18 1101 aa24.61■■□□□ 1.53
RCCD1-205ENST00000556333 ZBED3Q96IU2 234 aaPredicted RBP24.61■■□□□ 1.53
RCCD1-205ENST00000556333 BOLA2Q9H3K6 86 aa24.61■■□□□ 1.53
RCCD1-205ENST00000556333 PITPNM2Q9BZ72 1349 aa24.61■■□□□ 1.53
RCCD1-205ENST00000556333 MECOMQ03112 1051 aa24.6■■□□□ 1.53
RCCD1-205ENST00000556333 HHIPL2Q6UWX4 724 aa24.6■■□□□ 1.53
RCCD1-205ENST00000556333 MRIQ9BWK5 157 aa24.6■■□□□ 1.53
RCCD1-205ENST00000556333 TDRD3Q9H7E2 651 aaKnown RBP24.6■■□□□ 1.53
RCCD1-205ENST00000556333 VEZTQ9HBM0 779 aa24.6■■□□□ 1.53
RCCD1-205ENST00000556333 ECHDC1Q9NTX5 307 aa24.6■■□□□ 1.53
RCCD1-205ENST00000556333 AK9Q5TCS8 1911 aa24.59■■□□□ 1.53
RCCD1-205ENST00000556333 ADM5C9JUS6 153 aa24.59■■□□□ 1.53
RCCD1-205ENST00000556333 TRAF5O00463 557 aa24.59■■□□□ 1.53
RCCD1-205ENST00000556333 HSPA1AP0DMV8 641 aaKnown RBP24.59■■□□□ 1.53
RCCD1-205ENST00000556333 HSPA1BP0DMV9 641 aaKnown RBP24.59■■□□□ 1.53
RCCD1-205ENST00000556333 ATP5JP18859 108 aa24.59■■□□□ 1.53
RCCD1-205ENST00000556333 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.59■■□□□ 1.53
RCCD1-205ENST00000556333 ZDHHC15Q96MV8 337 aa24.59■■□□□ 1.53
RCCD1-205ENST00000556333 GSTO1P78417 241 aa24.58■■□□□ 1.53
RCCD1-205ENST00000556333 APOBEC3FQ8IUX4 373 aaKnown RBP24.58■■□□□ 1.53
RCCD1-205ENST00000556333 LNPKQ9C0E8 428 aa24.58■■□□□ 1.53
RCCD1-205ENST00000556333 ANTXR1Q9H6X2 564 aa24.58■■□□□ 1.53
RCCD1-205ENST00000556333 ZNF408Q9H9D4 720 aa24.58■■□□□ 1.53
RCCD1-205ENST00000556333 PIH1D3Q9NQM4 214 aaKnown RBP24.58■■□□□ 1.53
RCCD1-205ENST00000556333 DAGLAQ9Y4D2 1042 aa24.58■■□□□ 1.53
RCCD1-205ENST00000556333 IDH1O75874 414 aaKnown RBP24.57■■□□□ 1.52
RCCD1-205ENST00000556333 FMR1Q06787 632 aaKnown RBP eCLIP24.57■■□□□ 1.52
RCCD1-205ENST00000556333 TTF1Q15361 905 aaPredicted RBP24.57■■□□□ 1.52
RCCD1-205ENST00000556333 TSHZ3Q63HK5 1081 aa24.57■■□□□ 1.52
RCCD1-205ENST00000556333 TMOD2Q9NZR1 351 aa24.57■■□□□ 1.52
RCCD1-205ENST00000556333 ZNF70Q9UC06 446 aaPredicted RBP24.57■■□□□ 1.52
RCCD1-205ENST00000556333 AOX1Q06278 1338 aa24.57■■□□□ 1.52
RCCD1-205ENST00000556333 PASKQ96RG2 1323 aa24.57■■□□□ 1.52
RCCD1-205ENST00000556333 GOLIM4O00461 696 aa24.56■■□□□ 1.52
RCCD1-205ENST00000556333 LDHCP07864 332 aa24.56■■□□□ 1.52
RCCD1-205ENST00000556333 NAA16Q6N069 864 aaPredicted RBP24.56■■□□□ 1.52
RCCD1-205ENST00000556333 OTUD7AQ8TE49 926 aaPredicted RBP24.56■■□□□ 1.52
RCCD1-205ENST00000556333 NSUN4Q96CB9 384 aaKnown RBP24.56■■□□□ 1.52
RCCD1-205ENST00000556333 MX1P20591 662 aa24.55■■□□□ 1.52
RCCD1-205ENST00000556333 SPDYE2Q495Y8 402 aa24.55■■□□□ 1.52
RCCD1-205ENST00000556333 DLK2Q6UY11 383 aa24.55■■□□□ 1.52
RCCD1-205ENST00000556333 CHD1LQ86WJ1 897 aa24.55■■□□□ 1.52
RCCD1-205ENST00000556333 PAG1Q9NWQ8 432 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms