RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TLL2Q9Y6L7 1015 aa14.28□□□□□ -0.12
SLIRP-205ENST00000556310 TFCP2Q12800 502 aa14.27□□□□□ -0.13
SLIRP-205ENST00000556310 G3BP1Q13283 466 aaKnown RBP eCLIP14.27□□□□□ -0.13
SLIRP-205ENST00000556310 CFAP100Q494V2 611 aa14.27□□□□□ -0.13
SLIRP-205ENST00000556310 CEP85Q6P2H3 762 aa14.27□□□□□ -0.13
SLIRP-205ENST00000556310 APOBEC3FQ8IUX4 373 aaKnown RBP14.27□□□□□ -0.13
SLIRP-205ENST00000556310 CDCA5Q96FF9 252 aa14.27□□□□□ -0.13
SLIRP-205ENST00000556310 GNL3LQ9NVN8 582 aaKnown RBP14.27□□□□□ -0.13
SLIRP-205ENST00000556310 TTF2Q9UNY4 1162 aaKnown RBP14.27□□□□□ -0.13
SLIRP-205ENST00000556310 COG6Q9Y2V7 657 aa14.27□□□□□ -0.13
SLIRP-205ENST00000556310 A0A1B0GUL7 405 aa14.26□□□□□ -0.13
SLIRP-205ENST00000556310 SEMA3EO15041 775 aa14.26□□□□□ -0.13
SLIRP-205ENST00000556310 ADORA1P30542 326 aa14.26□□□□□ -0.13
SLIRP-205ENST00000556310 PDE3AQ14432 1141 aa14.26□□□□□ -0.13
SLIRP-205ENST00000556310 DEFB115Q30KQ5 88 aa14.26□□□□□ -0.13
SLIRP-205ENST00000556310 DLK2Q6UY11 383 aa14.26□□□□□ -0.13
SLIRP-205ENST00000556310 SAPCD2Q86UD0 394 aa14.26□□□□□ -0.13
SLIRP-205ENST00000556310 YTHDC1Q96MU7 727 aaKnown RBP14.26□□□□□ -0.13
SLIRP-205ENST00000556310 SERPINA10Q9UK55 444 aa14.26□□□□□ -0.13
SLIRP-205ENST00000556310 SUGT1Q9Y2Z0 365 aa14.26□□□□□ -0.13
SLIRP-205ENST00000556310 MAST3O60307 1309 aa14.25□□□□□ -0.13
SLIRP-205ENST00000556310 MYO1BO43795 1136 aa14.25□□□□□ -0.13
SLIRP-205ENST00000556310 PHKA1P46020 1223 aa14.25□□□□□ -0.13
SLIRP-205ENST00000556310 VEGFBP49765 207 aa14.25□□□□□ -0.13
SLIRP-205ENST00000556310 CCDC102BQ68D86 513 aa14.25□□□□□ -0.13
SLIRP-205ENST00000556310 WDR66Q8TBY9 1149 aa14.25□□□□□ -0.13
SLIRP-205ENST00000556310 RNF25Q96BH1 459 aaPredicted RBP14.25□□□□□ -0.13
SLIRP-205ENST00000556310 HHIPL1Q96JK4 782 aa14.25□□□□□ -0.13
SLIRP-205ENST00000556310 CHMP4BQ9H444 224 aaKnown RBP14.25□□□□□ -0.13
SLIRP-205ENST00000556310 GBA2Q9HCG7 927 aaPredicted RBP14.25□□□□□ -0.13
SLIRP-205ENST00000556310 PDS5AQ29RF7 1337 aaKnown RBP14.24□□□□□ -0.13
SLIRP-205ENST00000556310 CHRM1P11229 460 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-205ENST00000556310 RBM5P52756 815 aaKnown RBP eCLIP14.24□□□□□ -0.13
SLIRP-205ENST00000556310 TIMM10P62072 90 aa14.24□□□□□ -0.13
SLIRP-205ENST00000556310 HDLBPQ00341 1268 aaKnown RBP14.24□□□□□ -0.13
SLIRP-205ENST00000556310 OS9Q13438 667 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-205ENST00000556310 GRIK5Q16478 980 aa14.24□□□□□ -0.13
SLIRP-205ENST00000556310 XAGE2Q96GT9 111 aa14.24□□□□□ -0.13
SLIRP-205ENST00000556310 GPR108Q9NPR9 543 aa14.24□□□□□ -0.13
SLIRP-205ENST00000556310 ZBTB40Q9NUA8 1239 aa14.24□□□□□ -0.13
SLIRP-205ENST00000556310 DENND2AQ9ULE3 1009 aa14.24□□□□□ -0.13
SLIRP-205ENST00000556310 NOP58Q9Y2X3 529 aaKnown RBP14.24□□□□□ -0.13
SLIRP-205ENST00000556310 PCDHAC2Q9Y5I4 1007 aa14.24□□□□□ -0.13
SLIRP-205ENST00000556310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-205ENST00000556310 SALL1Q9NSC2 1324 aa14.23□□□□□ -0.13
SLIRP-205ENST00000556310 SURF6O75683 361 aaKnown RBP14.23□□□□□ -0.13
SLIRP-205ENST00000556310 CD44P16070 742 aaKnown RBP14.23□□□□□ -0.13
SLIRP-205ENST00000556310 ECE1P42892 770 aa14.23□□□□□ -0.13
SLIRP-205ENST00000556310 CRKP46108 304 aa14.23□□□□□ -0.13
SLIRP-205ENST00000556310 C20orf194Q5TEA3 1177 aa14.23□□□□□ -0.13
SLIRP-205ENST00000556310 C2orf69Q8N8R5 385 aa14.23□□□□□ -0.13
SLIRP-205ENST00000556310 CAPNS2Q96L46 248 aa14.23□□□□□ -0.13
SLIRP-205ENST00000556310 PRMT6Q96LA8 375 aaPredicted RBP14.23□□□□□ -0.13
SLIRP-205ENST00000556310 SCAF8Q9UPN6 1271 aaKnown RBP14.23□□□□□ -0.13
SLIRP-205ENST00000556310 AOX1Q06278 1338 aa14.22□□□□□ -0.13
SLIRP-205ENST00000556310 WDR33Q9C0J8 1336 aaKnown RBP14.22□□□□□ -0.13
SLIRP-205ENST00000556310 RIOK3O14730 519 aaKnown RBP14.22□□□□□ -0.13
SLIRP-205ENST00000556310 HUNKP57058 714 aa14.22□□□□□ -0.13
SLIRP-205ENST00000556310 FKBP1BP68106 108 aa14.22□□□□□ -0.13
SLIRP-205ENST00000556310 RASGRF1Q13972 1273 aa14.22□□□□□ -0.13
SLIRP-205ENST00000556310 PAXIP1Q6ZW49 1069 aaPredicted RBP14.22□□□□□ -0.13
SLIRP-205ENST00000556310 TEKT1Q969V4 418 aa14.22□□□□□ -0.13
SLIRP-205ENST00000556310 NEUROD6Q96NK8 337 aa14.22□□□□□ -0.13
SLIRP-205ENST00000556310 PPP2R3BQ9Y5P8 575 aa14.22□□□□□ -0.13
SLIRP-205ENST00000556310 MAST2Q6P0Q8 1798 aa14.22□□□□□ -0.13
SLIRP-205ENST00000556310 MYH2Q9UKX2 1941 aa14.21□□□□□ -0.13
SLIRP-205ENST00000556310 CLRN2A0PK11 232 aa14.21□□□□□ -0.13
SLIRP-205ENST00000556310 TNNI3KQ59H18 835 aa14.21□□□□□ -0.13
SLIRP-205ENST00000556310 CYP4F22Q6NT55 531 aa14.21□□□□□ -0.13
SLIRP-205ENST00000556310 RPAP2Q8IXW5 612 aaPredicted RBP14.21□□□□□ -0.13
SLIRP-205ENST00000556310 ZGPATQ8N5A5 531 aaKnown RBP14.21□□□□□ -0.13
SLIRP-205ENST00000556310 MRIQ9BWK5 157 aa14.21□□□□□ -0.13
SLIRP-205ENST00000556310 VEZTQ9HBM0 779 aa14.21□□□□□ -0.13
SLIRP-205ENST00000556310 FPGT-TNNI3KV9GXZ4 949 aa14.21□□□□□ -0.13
SLIRP-205ENST00000556310 AKAP11Q9UKA4 1901 aa14.21□□□□□ -0.14
SLIRP-205ENST00000556310 HMMRO75330 724 aa14.2□□□□□ -0.14
SLIRP-205ENST00000556310 PRDX5P30044 214 aa14.2□□□□□ -0.14
SLIRP-205ENST00000556310 NF2P35240 595 aa14.2□□□□□ -0.14
SLIRP-205ENST00000556310 TNFAIP1Q13829 316 aa14.2□□□□□ -0.14
SLIRP-205ENST00000556310 GORABQ5T7V8 394 aa14.2□□□□□ -0.14
SLIRP-205ENST00000556310 HHIPL2Q6UWX4 724 aa14.2□□□□□ -0.14
SLIRP-205ENST00000556310 ERC1Q8IUD2 1116 aa14.2□□□□□ -0.14
SLIRP-205ENST00000556310 ZDHHC15Q96MV8 337 aa14.2□□□□□ -0.14
SLIRP-205ENST00000556310 DEFB129Q9H1M3 183 aa14.2□□□□□ -0.14
SLIRP-205ENST00000556310 ZNF70Q9UC06 446 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-205ENST00000556310 SSC5DA1L4H1 1573 aa14.2□□□□□ -0.14
SLIRP-205ENST00000556310 LDHBP07195 334 aaKnown RBP14.19□□□□□ -0.14
SLIRP-205ENST00000556310 HSPA1AP0DMV8 641 aaKnown RBP14.19□□□□□ -0.14
SLIRP-205ENST00000556310 HSPA1BP0DMV9 641 aaKnown RBP14.19□□□□□ -0.14
SLIRP-205ENST00000556310 ARID4AP29374 1257 aaPredicted RBP14.19□□□□□ -0.14
SLIRP-205ENST00000556310 GRM1Q13255 1194 aa14.19□□□□□ -0.14
SLIRP-205ENST00000556310 HSP90AB4PQ58FF6 505 aa14.19□□□□□ -0.14
SLIRP-205ENST00000556310 PRAMEF18Q5VWM3 479 aa14.19□□□□□ -0.14
SLIRP-205ENST00000556310 TDRD3Q9H7E2 651 aaKnown RBP14.19□□□□□ -0.14
SLIRP-205ENST00000556310 EXOC6BQ9Y2D4 811 aa14.19□□□□□ -0.14
SLIRP-205ENST00000556310 OTOFQ9HC10 1997 aa14.18□□□□□ -0.14
SLIRP-205ENST00000556310 UQCRFS1P1P0C7P4 283 aa14.18□□□□□ -0.14
SLIRP-205ENST00000556310 RRP1P56182 461 aaKnown RBP14.18□□□□□ -0.14
SLIRP-205ENST00000556310 RGMBQ6NW40 437 aa14.18□□□□□ -0.14
SLIRP-205ENST00000556310 SIRT2Q8IXJ6 389 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms