RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 AP3B2Q13367 1082 aa6.71□□□□□ -1.34
CDKN3-210ENST00000556305 MAP3K11Q16584 847 aa6.71□□□□□ -1.34
CDKN3-210ENST00000556305 TTBK2Q6IQ55 1244 aa6.71□□□□□ -1.34
CDKN3-210ENST00000556305 KIAA0825Q8IV33 1275 aa6.71□□□□□ -1.34
CDKN3-210ENST00000556305 IL22RA1Q8N6P7 574 aa6.71□□□□□ -1.34
CDKN3-210ENST00000556305 SLC43A3Q8NBI5 491 aa6.71□□□□□ -1.34
CDKN3-210ENST00000556305 ZNF417Q8TAU3 575 aa6.71□□□□□ -1.34
CDKN3-210ENST00000556305 ZNF587Q96SQ5 575 aaPredicted RBP6.71□□□□□ -1.34
CDKN3-210ENST00000556305 ACBD3Q9H3P7 528 aa6.71□□□□□ -1.34
CDKN3-210ENST00000556305 SOX17Q9H6I2 414 aaPredicted RBP6.71□□□□□ -1.34
CDKN3-210ENST00000556305 SRA1Q9HD15 236 aaKnown RBP6.71□□□□□ -1.34
CDKN3-210ENST00000556305 PIK3R2O00459 728 aa6.7□□□□□ -1.34
CDKN3-210ENST00000556305 ENC1O14682 589 aa6.7□□□□□ -1.34
CDKN3-210ENST00000556305 ALBP02768 609 aa6.7□□□□□ -1.34
CDKN3-210ENST00000556305 ESRRAP11474 423 aaPredicted RBP6.7□□□□□ -1.34
CDKN3-210ENST00000556305 NME2P22392 152 aa6.7□□□□□ -1.34
CDKN3-210ENST00000556305 PCNX4Q63HM2 1172 aa6.7□□□□□ -1.34
CDKN3-210ENST00000556305 VN1R5Q7Z5H4 357 aa6.7□□□□□ -1.34
CDKN3-210ENST00000556305 MAP4K3Q8IVH8 894 aa6.7□□□□□ -1.34
CDKN3-210ENST00000556305 DRC1Q96MC2 740 aa6.7□□□□□ -1.34
CDKN3-210ENST00000556305 SPON2Q9BUD6 331 aa6.7□□□□□ -1.34
CDKN3-210ENST00000556305 PRDM6Q9NQX0 595 aa6.7□□□□□ -1.34
CDKN3-210ENST00000556305 SH2B1Q9NRF2 756 aaPredicted RBP6.7□□□□□ -1.34
CDKN3-210ENST00000556305 MINDY4BA8MYZ0 360 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 EPHA1P21709 976 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 EIF4A3P38919 411 aaKnown RBP6.69□□□□□ -1.34
CDKN3-210ENST00000556305 C19orf57Q0VDD7 668 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 FAAP100Q0VG06 881 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 SNAP47Q5SQN1 464 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 HP1BP3Q5SSJ5 553 aaPredicted RBP6.69□□□□□ -1.34
CDKN3-210ENST00000556305 C20orf204Q6ZNR8 217 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 SULF2Q8IWU5 870 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 SLC7A3Q8WY07 619 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 BTBD6Q96KE9 485 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 TINF2Q9BSI4 451 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 OSGEPQ9NPF4 335 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 COPRSQ9NQ92 184 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 CYP8B1Q9UNU6 501 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 STARD13Q9Y3M8 1113 aa6.69□□□□□ -1.34
CDKN3-210ENST00000556305 SUPT16HQ9Y5B9 1047 aaKnown RBP6.69□□□□□ -1.34
CDKN3-210ENST00000556305 CYP11A1P05108 521 aa6.68□□□□□ -1.34
CDKN3-210ENST00000556305 ZNF157P51786 506 aaPredicted RBP6.68□□□□□ -1.34
CDKN3-210ENST00000556305 AFF1P51825 1210 aaKnown RBP6.68□□□□□ -1.34
CDKN3-210ENST00000556305 RACK1P63244 317 aaKnown RBP6.68□□□□□ -1.34
CDKN3-210ENST00000556305 LMNB2Q03252 620 aa6.68□□□□□ -1.34
CDKN3-210ENST00000556305 ARID5AQ03989 594 aa6.68□□□□□ -1.34
CDKN3-210ENST00000556305 MSL1Q68DK7 614 aa6.68□□□□□ -1.34
CDKN3-210ENST00000556305 SCARA3Q6AZY7 606 aa6.68□□□□□ -1.34
CDKN3-210ENST00000556305 AGMOQ6ZNB7 445 aa6.68□□□□□ -1.34
CDKN3-210ENST00000556305 PHC3Q8NDX5 983 aa6.68□□□□□ -1.34
CDKN3-210ENST00000556305 NEDD1Q8NHV4 660 aa6.68□□□□□ -1.34
CDKN3-210ENST00000556305 GPRASP2Q96D09 838 aa6.68□□□□□ -1.34
CDKN3-210ENST00000556305 TRIM56Q9BRZ2 755 aaKnown RBP6.68□□□□□ -1.34
CDKN3-210ENST00000556305 TANGO6Q9C0B7 1094 aa6.68□□□□□ -1.34
CDKN3-210ENST00000556305 MIR1-1HGQ9H1L0 117 aa6.68□□□□□ -1.34
CDKN3-210ENST00000556305 CBX8Q9HC52 389 aa6.68□□□□□ -1.34
CDKN3-210ENST00000556305 CNTNAP5Q8WYK1 1306 aa6.68□□□□□ -1.34
CDKN3-210ENST00000556305 SPDYE3A6NKU9 549 aa6.67□□□□□ -1.34
CDKN3-210ENST00000556305 CDC25BP30305 580 aa6.67□□□□□ -1.34
CDKN3-210ENST00000556305 GSTM4Q03013 218 aa6.67□□□□□ -1.34
CDKN3-210ENST00000556305 PAK2Q13177 524 aa6.67□□□□□ -1.34
CDKN3-210ENST00000556305 ZNF423Q2M1K9 1284 aa6.67□□□□□ -1.34
CDKN3-210ENST00000556305 LCE3BQ5TA77 95 aa6.67□□□□□ -1.34
CDKN3-210ENST00000556305 LLGL2Q6P1M3 1020 aa6.67□□□□□ -1.34
CDKN3-210ENST00000556305 CCDC84Q86UT8 332 aaPredicted RBP6.67□□□□□ -1.34
CDKN3-210ENST00000556305 KLHL23Q8NBE8 558 aa6.67□□□□□ -1.34
CDKN3-210ENST00000556305 RHOVQ96L33 236 aa6.67□□□□□ -1.34
CDKN3-210ENST00000556305 KRTAP4-12Q9BQ66 201 aa6.67□□□□□ -1.34
CDKN3-210ENST00000556305 CORO1BQ9BR76 489 aa6.67□□□□□ -1.34
CDKN3-210ENST00000556305 RRAGCQ9HB90 399 aa6.67□□□□□ -1.34
CDKN3-210ENST00000556305 LINC01387J3KSC0 135 aa6.66□□□□□ -1.34
CDKN3-210ENST00000556305 ARNTP27540 789 aa6.66□□□□□ -1.34
CDKN3-210ENST00000556305 DNAJA1P31689 397 aaKnown RBP6.66□□□□□ -1.34
CDKN3-210ENST00000556305 GJA8P48165 433 aa6.66□□□□□ -1.34
CDKN3-210ENST00000556305 CAMK2GQ13555 558 aaPredicted RBP6.66□□□□□ -1.34
CDKN3-210ENST00000556305 COL9A2Q14055 689 aaPredicted RBP6.66□□□□□ -1.34
CDKN3-210ENST00000556305 GRIK5Q16478 980 aa6.66□□□□□ -1.34
CDKN3-210ENST00000556305 TRIM42Q8IWZ5 723 aa6.66□□□□□ -1.34
CDKN3-210ENST00000556305 DTWD1Q8N5C7 304 aa6.66□□□□□ -1.34
CDKN3-210ENST00000556305 UBXN4Q92575 508 aa6.66□□□□□ -1.34
CDKN3-210ENST00000556305 ROBO2Q9HCK4 1378 aa6.66□□□□□ -1.34
CDKN3-210ENST00000556305 SHISA8B8ZZ34 492 aa6.65□□□□□ -1.34
CDKN3-210ENST00000556305 F6X3S4 739 aa6.65□□□□□ -1.34
CDKN3-210ENST00000556305 SOX1O00570 391 aaPredicted RBP6.65□□□□□ -1.34
CDKN3-210ENST00000556305 FSCN2O14926 492 aa6.65□□□□□ -1.34
CDKN3-210ENST00000556305 PAGE1O75459 146 aa6.65□□□□□ -1.34
CDKN3-210ENST00000556305 BPNT1O95861 308 aa6.65□□□□□ -1.34
CDKN3-210ENST00000556305 PF4P02776 101 aa6.65□□□□□ -1.34
CDKN3-210ENST00000556305 ATP2B1P20020 1258 aa6.65□□□□□ -1.34
CDKN3-210ENST00000556305 TNNI2P48788 182 aa6.65□□□□□ -1.34
CDKN3-210ENST00000556305 RAC1P63000 192 aa6.65□□□□□ -1.34
CDKN3-210ENST00000556305 C1orf229Q6ZS94 237 aaPredicted RBP6.65□□□□□ -1.34
CDKN3-210ENST00000556305 GOLM1Q8NBJ4 401 aa6.65□□□□□ -1.34
CDKN3-210ENST00000556305 ZNF296Q8WUU4 475 aaPredicted RBP6.65□□□□□ -1.34
CDKN3-210ENST00000556305 NT5C1AQ9BXI3 368 aa6.65□□□□□ -1.34
CDKN3-210ENST00000556305 PPP1R1BQ9UD71 204 aaPredicted RBP6.65□□□□□ -1.34
CDKN3-210ENST00000556305 TLR6Q9Y2C9 796 aa6.65□□□□□ -1.34
CDKN3-210ENST00000556305 GSTP1P09211 210 aaKnown RBP6.64□□□□□ -1.35
CDKN3-210ENST00000556305 TFE3P19532 575 aaPredicted RBP6.64□□□□□ -1.35
CDKN3-210ENST00000556305 BAG6P46379 1132 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms