RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 METTL24Q5JXM2 366 aa22.25■■□□□ 1.15
NPC2-208ENST00000556009 VPS37DQ86XT2 251 aa22.25■■□□□ 1.15
NPC2-208ENST00000556009 IFNL1Q8IU54 200 aa22.25■■□□□ 1.15
NPC2-208ENST00000556009 ANKRD13AQ8IZ07 590 aa22.25■■□□□ 1.15
NPC2-208ENST00000556009 TBC1D22AQ8WUA7 517 aa22.25■■□□□ 1.15
NPC2-208ENST00000556009 TDRD3Q9H7E2 651 aaKnown RBP22.25■■□□□ 1.15
NPC2-208ENST00000556009 CRKP46108 304 aa22.24■■□□□ 1.15
NPC2-208ENST00000556009 MRIQ9BWK5 157 aa22.24■■□□□ 1.15
NPC2-208ENST00000556009 FBXO46Q6PJ61 603 aaPredicted RBP22.23■■□□□ 1.15
NPC2-208ENST00000556009 TEPSINQ96N21 525 aa22.23■■□□□ 1.15
NPC2-208ENST00000556009 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.23■■□□□ 1.15
NPC2-208ENST00000556009 KIF16BQ96L93 1317 aa22.23■■□□□ 1.15
NPC2-208ENST00000556009 TESPA1A2RU30 521 aaPredicted RBP22.21■■□□□ 1.15
NPC2-208ENST00000556009 IGF2BP3O00425 579 aaKnown RBP eCLIP22.21■■□□□ 1.15
NPC2-208ENST00000556009 FGFR2P21802 821 aa22.21■■□□□ 1.15
NPC2-208ENST00000556009 TNNI2P48788 182 aa22.21■■□□□ 1.15
NPC2-208ENST00000556009 GRIK5Q16478 980 aa22.21■■□□□ 1.15
NPC2-208ENST00000556009 TRMT2AQ8IZ69 625 aaKnown RBP22.21■■□□□ 1.15
NPC2-208ENST00000556009 IQSEC3Q9UPP2 1182 aaPredicted RBP22.21■■□□□ 1.15
NPC2-208ENST00000556009 FRAT2O75474 233 aaPredicted RBP22.2■■□□□ 1.14
NPC2-208ENST00000556009 OTUD7BQ6GQQ9 843 aa22.2■■□□□ 1.14
NPC2-208ENST00000556009 KLHDC4Q8TBB5 520 aa22.2■■□□□ 1.14
NPC2-208ENST00000556009 SUGT1Q9Y2Z0 365 aa22.2■■□□□ 1.14
NPC2-208ENST00000556009 SLC34A2O95436 690 aa22.19■■□□□ 1.14
NPC2-208ENST00000556009 IFIT1P09914 478 aaKnown RBP22.19■■□□□ 1.14
NPC2-208ENST00000556009 GJA5P36382 358 aa22.19■■□□□ 1.14
NPC2-208ENST00000556009 RFX5P48382 616 aaPredicted RBP22.19■■□□□ 1.14
NPC2-208ENST00000556009 BCAMP50895 628 aa22.19■■□□□ 1.14
NPC2-208ENST00000556009 CHAF1AQ13111 956 aaPredicted RBP22.19■■□□□ 1.14
NPC2-208ENST00000556009 PUM3Q15397 648 aaKnown RBP22.19■■□□□ 1.14
NPC2-208ENST00000556009 CDAN1Q8IWY9 1227 aa22.19■■□□□ 1.14
NPC2-208ENST00000556009 HTTP42858 3142 aa22.18■■□□□ 1.14
NPC2-208ENST00000556009 TCP10L2B9ZVM9 353 aa22.18■■□□□ 1.14
NPC2-208ENST00000556009 EYA2O00167 538 aa22.18■■□□□ 1.14
NPC2-208ENST00000556009 TEKT1Q969V4 418 aa22.18■■□□□ 1.14
NPC2-208ENST00000556009 ZDHHC15Q96MV8 337 aa22.18■■□□□ 1.14
NPC2-208ENST00000556009 CT47B1P0C2W7 299 aaPredicted RBP22.17■■□□□ 1.14
NPC2-208ENST00000556009 MAP3K9P80192 1104 aa22.17■■□□□ 1.14
NPC2-208ENST00000556009 FKBP1CQ5VVH2 108 aa22.17■■□□□ 1.14
NPC2-208ENST00000556009 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.17■■□□□ 1.14
NPC2-208ENST00000556009 CDCA7LQ96GN5 454 aa22.17■■□□□ 1.14
NPC2-208ENST00000556009 TMEM39BQ9GZU3 492 aa22.17■■□□□ 1.14
NPC2-208ENST00000556009 MS4A4AQ96JQ5 239 aa22.16■■□□□ 1.14
NPC2-208ENST00000556009 PTPN18Q99952 460 aa22.16■■□□□ 1.14
NPC2-208ENST00000556009 ELP3Q9H9T3 547 aa22.16■■□□□ 1.14
NPC2-208ENST00000556009 SMC4Q9NTJ3 1288 aa22.16■■□□□ 1.14
NPC2-208ENST00000556009 FBXO3Q9UK99 471 aa22.16■■□□□ 1.14
NPC2-208ENST00000556009 MAST3O60307 1309 aa22.15■■□□□ 1.14
NPC2-208ENST00000556009 APOBEC3HQ6NTF7 200 aaKnown RBP22.15■■□□□ 1.14
NPC2-208ENST00000556009 HHIPL2Q6UWX4 724 aa22.15■■□□□ 1.14
NPC2-208ENST00000556009 ATG9AQ7Z3C6 839 aa22.15■■□□□ 1.14
NPC2-208ENST00000556009 FAM83AQ86UY5 434 aa22.15■■□□□ 1.14
NPC2-208ENST00000556009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.15■■□□□ 1.143e-7■■■■□ 20.1
NPC2-208ENST00000556009 LPIN2Q92539 896 aa22.15■■□□□ 1.14
NPC2-208ENST00000556009 OPTNQ96CV9 577 aa22.15■■□□□ 1.14
NPC2-208ENST00000556009 RBBP6Q7Z6E9 1792 aaKnown RBP22.15■■□□□ 1.14
NPC2-208ENST00000556009 CIAO1O76071 339 aa22.13■■□□□ 1.13
NPC2-208ENST00000556009 SLC5A1P13866 664 aa22.13■■□□□ 1.13
NPC2-208ENST00000556009 CRHR2Q13324 411 aa22.13■■□□□ 1.13
NPC2-208ENST00000556009 VGLL4Q14135 290 aa22.13■■□□□ 1.13
NPC2-208ENST00000556009 DIEXFQ68CQ4 756 aaKnown RBP22.13■■□□□ 1.13
NPC2-208ENST00000556009 OTOP1Q7RTM1 612 aa22.13■■□□□ 1.13
NPC2-208ENST00000556009 WDR66Q8TBY9 1149 aa22.13■■□□□ 1.13
NPC2-208ENST00000556009 HOOK2Q96ED9 719 aa22.13■■□□□ 1.13
NPC2-208ENST00000556009 ERO1AQ96HE7 468 aa22.13■■□□□ 1.13
NPC2-208ENST00000556009 TMOD2Q9NZR1 351 aa22.13■■□□□ 1.13
NPC2-208ENST00000556009 CSADQ9Y600 493 aa22.13■■□□□ 1.13
NPC2-208ENST00000556009 ZSWIM8A7E2V4 1837 aa22.13■■□□□ 1.13
NPC2-208ENST00000556009 UBTFL1P0CB47 393 aaPredicted RBP22.12■■□□□ 1.13
NPC2-208ENST00000556009 HDAC5Q9UQL6 1122 aa22.12■■□□□ 1.13
NPC2-208ENST00000556009 TRIM17Q9Y577 477 aa22.12■■□□□ 1.13
NPC2-208ENST00000556009 CENPFP49454 3210 aa22.12■■□□□ 1.13
NPC2-208ENST00000556009 ZBTB22O15209 634 aa22.11■■□□□ 1.13
NPC2-208ENST00000556009 GTF2A2P52657 109 aa22.11■■□□□ 1.13
NPC2-208ENST00000556009 CACNB3P54284 484 aa22.11■■□□□ 1.13
NPC2-208ENST00000556009 NOB1Q9ULX3 412 aaKnown RBP22.11■■□□□ 1.13
NPC2-208ENST00000556009 SP3Q02447 781 aa22.1■■□□□ 1.13
NPC2-208ENST00000556009 CNKSR2Q8WXI2 1034 aa22.1■■□□□ 1.13
NPC2-208ENST00000556009 BRI3BPQ8WY22 251 aa22.1■■□□□ 1.13
NPC2-208ENST00000556009 API5Q9BZZ5 524 aaKnown RBP22.1■■□□□ 1.13
NPC2-208ENST00000556009 AK9Q5TCS8 1911 aa22.1■■□□□ 1.13
NPC2-208ENST00000556009 SPDYE5A6NIY4 337 aa22.09■■□□□ 1.13
NPC2-208ENST00000556009 CAP1Q01518 475 aa22.09■■□□□ 1.13
NPC2-208ENST00000556009 INTS3Q68E01 1043 aaKnown RBP22.09■■□□□ 1.13
NPC2-208ENST00000556009 CEP126Q9P2H0 1117 aa22.09■■□□□ 1.13
NPC2-208ENST00000556009 CCL15-CCL14A0A0B4J2E2 113 aa22.08■■□□□ 1.13
NPC2-208ENST00000556009 CCL15Q16663 113 aa22.08■■□□□ 1.13
NPC2-208ENST00000556009 PTPN22Q9Y2R2 807 aa22.08■■□□□ 1.13
NPC2-208ENST00000556009 RPAP1Q9BWH6 1393 aaPredicted RBP22.08■■□□□ 1.12
NPC2-208ENST00000556009 IL15P40933 162 aaPredicted RBP22.07■■□□□ 1.12
NPC2-208ENST00000556009 ATP2B3Q16720 1220 aa22.07■■□□□ 1.12
NPC2-208ENST00000556009 ERO1BQ86YB8 467 aa22.07■■□□□ 1.12
NPC2-208ENST00000556009 CD99L2Q8TCZ2 262 aa22.07■■□□□ 1.12
NPC2-208ENST00000556009 FAM151AQ8WW52 585 aa22.07■■□□□ 1.12
NPC2-208ENST00000556009 OTUD5Q96G74 571 aa22.07■■□□□ 1.12
NPC2-208ENST00000556009 EFCC1Q9HA90 598 aa22.07■■□□□ 1.12
NPC2-208ENST00000556009 GNL3LQ9NVN8 582 aaKnown RBP22.07■■□□□ 1.12
NPC2-208ENST00000556009 SNCAIPQ9Y6H5 919 aa22.07■■□□□ 1.12
NPC2-208ENST00000556009 SEMA3EO15041 775 aa22.06■■□□□ 1.12
NPC2-208ENST00000556009 DCAF15Q66K64 600 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms