RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 MIS18AQ9NYP9 233 aa9.81□□□□□ -0.84
SUPT16H-204ENST00000555943 PDZRN3Q9UPQ7 1066 aa9.81□□□□□ -0.84
SUPT16H-204ENST00000555943 UTRNP46939 3433 aa9.81□□□□□ -0.84
SUPT16H-204ENST00000555943 PALLDQ8WX93 1383 aa9.8□□□□□ -0.84
SUPT16H-204ENST00000555943 SCNN1DP51172 638 aa9.8□□□□□ -0.84
SUPT16H-204ENST00000555943 SEC13P55735 322 aa9.8□□□□□ -0.84
SUPT16H-204ENST00000555943 SLFN5Q08AF3 891 aa9.8□□□□□ -0.84
SUPT16H-204ENST00000555943 PIGBQ92521 554 aa9.8□□□□□ -0.84
SUPT16H-204ENST00000555943 MBIPQ9NS73 344 aa9.8□□□□□ -0.84
SUPT16H-204ENST00000555943 RBM19Q9Y4C8 960 aaKnown RBP9.8□□□□□ -0.84
SUPT16H-204ENST00000555943 TOGARAM1Q9Y4F4 1720 aa9.79□□□□□ -0.84
SUPT16H-204ENST00000555943 TMEM229AB2RXF0 380 aa9.79□□□□□ -0.84
SUPT16H-204ENST00000555943 ADH1AP07327 375 aa9.79□□□□□ -0.84
SUPT16H-204ENST00000555943 ZNF853P0CG23 659 aa9.79□□□□□ -0.84
SUPT16H-204ENST00000555943 SLC39A6Q13433 755 aa9.79□□□□□ -0.84
SUPT16H-204ENST00000555943 ZNF790Q6PG37 636 aa9.79□□□□□ -0.84
SUPT16H-204ENST00000555943 Q6ZVU0 165 aa9.79□□□□□ -0.84
SUPT16H-204ENST00000555943 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.79□□□□□ -0.84
SUPT16H-204ENST00000555943 TSR2Q969E8 191 aaKnown RBP9.79□□□□□ -0.84
SUPT16H-204ENST00000555943 FANCIQ9NVI1 1328 aa9.79□□□□□ -0.84
SUPT16H-204ENST00000555943 CENPBP07199 599 aaPredicted RBP9.78□□□□□ -0.84
SUPT16H-204ENST00000555943 GDF10P55107 478 aa9.78□□□□□ -0.84
SUPT16H-204ENST00000555943 KDF1Q8NAX2 398 aaPredicted RBP9.78□□□□□ -0.84
SUPT16H-204ENST00000555943 ETNK1Q9HBU6 452 aa9.78□□□□□ -0.84
SUPT16H-204ENST00000555943 ZNF358Q9NW07 568 aa9.78□□□□□ -0.84
SUPT16H-204ENST00000555943 C4BP0C0L5 1744 aa9.78□□□□□ -0.84
SUPT16H-204ENST00000555943 DLG5Q8TDM6 1919 aa9.78□□□□□ -0.84
SUPT16H-204ENST00000555943 KCNQ3O43525 872 aa9.77□□□□□ -0.85
SUPT16H-204ENST00000555943 PTCD1O75127 700 aaKnown RBP9.77□□□□□ -0.85
SUPT16H-204ENST00000555943 GNRH1P01148 92 aa9.77□□□□□ -0.85
SUPT16H-204ENST00000555943 EXOSC9Q06265 439 aaKnown RBP9.77□□□□□ -0.85
SUPT16H-204ENST00000555943 DUSP27Q5VZP5 1158 aa9.77□□□□□ -0.85
SUPT16H-204ENST00000555943 AGBL1Q96MI9 1066 aa9.77□□□□□ -0.85
SUPT16H-204ENST00000555943 FMNL2Q96PY5 1086 aa9.77□□□□□ -0.85
SUPT16H-204ENST00000555943 ATG3Q9NT62 314 aa9.77□□□□□ -0.85
SUPT16H-204ENST00000555943 ASAP1Q9ULH1 1129 aa9.77□□□□□ -0.85
SUPT16H-204ENST00000555943 ZNF831Q5JPB2 1677 aa9.77□□□□□ -0.85
SUPT16H-204ENST00000555943 ELL2O00472 640 aaPredicted RBP9.76□□□□□ -0.85
SUPT16H-204ENST00000555943 KCNQ4P56696 695 aa9.76□□□□□ -0.85
SUPT16H-204ENST00000555943 EIF4A1P60842 406 aaKnown RBP9.76□□□□□ -0.85
SUPT16H-204ENST00000555943 SWI5Q1ZZU3 235 aa9.76□□□□□ -0.85
SUPT16H-204ENST00000555943 COL23A1Q86Y22 540 aaPredicted RBP9.76□□□□□ -0.85
SUPT16H-204ENST00000555943 TRMT2AQ8IZ69 625 aaKnown RBP9.76□□□□□ -0.85
SUPT16H-204ENST00000555943 CLP1Q92989 425 aaKnown RBP9.76□□□□□ -0.85
SUPT16H-204ENST00000555943 CHMP4AQ9BY43 222 aa9.76□□□□□ -0.85
SUPT16H-204ENST00000555943 ARHGEF10LQ9HCE6 1279 aa9.76□□□□□ -0.85
SUPT16H-204ENST00000555943 RAB6BQ9NRW1 208 aa9.76□□□□□ -0.85
SUPT16H-204ENST00000555943 MRC1P22897 1456 aa9.76□□□□□ -0.85
SUPT16H-204ENST00000555943 UBR3Q6ZT12 1888 aa9.76□□□□□ -0.85
SUPT16H-204ENST00000555943 GOLGB1Q14789 3259 aaKnown RBP9.76□□□□□ -0.85
SUPT16H-204ENST00000555943 SCN11AQ9UI33 1791 aa9.75□□□□□ -0.85
SUPT16H-204ENST00000555943 M0R2N6 131 aa9.75□□□□□ -0.85
SUPT16H-204ENST00000555943 LGR5O75473 907 aa9.75□□□□□ -0.85
SUPT16H-204ENST00000555943 INHAP05111 366 aa9.75□□□□□ -0.85
SUPT16H-204ENST00000555943 SNRPA1P09661 255 aaKnown RBP9.75□□□□□ -0.85
SUPT16H-204ENST00000555943 SSFA2P28290 1259 aa9.75□□□□□ -0.85
SUPT16H-204ENST00000555943 GPR162Q16538 588 aa9.75□□□□□ -0.85
SUPT16H-204ENST00000555943 TWISTNBQ3B726 338 aaPredicted RBP9.75□□□□□ -0.85
SUPT16H-204ENST00000555943 TSEN2Q8NCE0 465 aaKnown RBP9.75□□□□□ -0.85
SUPT16H-204ENST00000555943 ZNF496Q96IT1 587 aaPredicted RBP9.75□□□□□ -0.85
SUPT16H-204ENST00000555943 ADAMTS7Q9UKP4 1686 aa9.74□□□□□ -0.85
SUPT16H-204ENST00000555943 LOC102724428A0A0B4J2F2 783 aa9.74□□□□□ -0.85
SUPT16H-204ENST00000555943 FAM187AA6NFU0 413 aa9.74□□□□□ -0.85
SUPT16H-204ENST00000555943 GRIN3BO60391 1043 aa9.74□□□□□ -0.85
SUPT16H-204ENST00000555943 CT47B1P0C2W7 299 aaPredicted RBP9.74□□□□□ -0.85
SUPT16H-204ENST00000555943 PTGIRP43119 386 aa9.74□□□□□ -0.85
SUPT16H-204ENST00000555943 SIK1P57059 783 aa9.74□□□□□ -0.85
SUPT16H-204ENST00000555943 C8orf58Q8NAV2 365 aa9.74□□□□□ -0.85
SUPT16H-204ENST00000555943 TEX13AQ9BXU3 409 aaPredicted RBP9.74□□□□□ -0.85
SUPT16H-204ENST00000555943 SERTAD1Q9UHV2 236 aa9.74□□□□□ -0.85
SUPT16H-204ENST00000555943 CD2APQ9Y5K6 639 aa9.74□□□□□ -0.85
SUPT16H-204ENST00000555943 SOS1Q07889 1333 aaPredicted RBP9.74□□□□□ -0.85
SUPT16H-204ENST00000555943 A0A1W2PRU2 124 aa9.73□□□□□ -0.85
SUPT16H-204ENST00000555943 BRD1O95696 1058 aa9.73□□□□□ -0.85
SUPT16H-204ENST00000555943 IL2RAP01589 272 aa9.73□□□□□ -0.85
SUPT16H-204ENST00000555943 HOXB7P09629 217 aa9.73□□□□□ -0.85
SUPT16H-204ENST00000555943 EIF2S2P20042 333 aaKnown RBP9.73□□□□□ -0.85
SUPT16H-204ENST00000555943 RELBQ01201 579 aa9.73□□□□□ -0.85
SUPT16H-204ENST00000555943 KRT24Q2M2I5 525 aa9.73□□□□□ -0.85
SUPT16H-204ENST00000555943 MEIOBQ8N635 442 aa9.73□□□□□ -0.85
SUPT16H-204ENST00000555943 XAGE2Q96GT9 111 aa9.73□□□□□ -0.85
SUPT16H-204ENST00000555943 HINFPQ9BQA5 517 aa9.73□□□□□ -0.85
SUPT16H-204ENST00000555943 HEG1Q9ULI3 1381 aa9.73□□□□□ -0.85
SUPT16H-204ENST00000555943 BACH1O14867 736 aa9.72□□□□□ -0.85
SUPT16H-204ENST00000555943 CAPN5O15484 640 aaPredicted RBP9.72□□□□□ -0.85
SUPT16H-204ENST00000555943 STARD3NLO95772 234 aa9.72□□□□□ -0.85
SUPT16H-204ENST00000555943 CCDC30Q5VVM6 783 aa9.72□□□□□ -0.85
SUPT16H-204ENST00000555943 KCTD17Q8N5Z5 321 aa9.72□□□□□ -0.85
SUPT16H-204ENST00000555943 TSPYL6Q8N831 410 aa9.72□□□□□ -0.85
SUPT16H-204ENST00000555943 ZNF428Q96B54 188 aa9.72□□□□□ -0.85
SUPT16H-204ENST00000555943 STK31Q9BXU1 1019 aa9.72□□□□□ -0.85
SUPT16H-204ENST00000555943 GFRA3O60609 400 aa9.71□□□□□ -0.86
SUPT16H-204ENST00000555943 PRMT3O60678 531 aa9.71□□□□□ -0.86
SUPT16H-204ENST00000555943 VAMP4O75379 141 aa9.71□□□□□ -0.86
SUPT16H-204ENST00000555943 PHLDB3Q6NSJ2 640 aa9.71□□□□□ -0.86
SUPT16H-204ENST00000555943 NPM2Q86SE8 214 aaKnown RBP9.71□□□□□ -0.86
SUPT16H-204ENST00000555943 TNS4Q8IZW8 715 aa9.71□□□□□ -0.86
SUPT16H-204ENST00000555943 PRIMPOLQ96LW4 560 aa9.71□□□□□ -0.86
SUPT16H-204ENST00000555943 SLC4A9Q96Q91 983 aa9.71□□□□□ -0.86
SUPT16H-204ENST00000555943 ZNF395Q9H8N7 513 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms