RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 LPIN2Q92539 896 aa15.88■□□□□ 0.13
HNRNPC-221ENST00000555883 VEZTQ9HBM0 779 aa15.88■□□□□ 0.13
HNRNPC-221ENST00000555883 ZNF70Q9UC06 446 aaPredicted RBP15.88■□□□□ 0.13
HNRNPC-221ENST00000555883 NOB1Q9ULX3 412 aaKnown RBP15.88■□□□□ 0.13
HNRNPC-221ENST00000555883 MAST3O60307 1309 aa15.88■□□□□ 0.13
HNRNPC-221ENST00000555883 MANSC4A6NHS7 340 aaPredicted RBP15.87■□□□□ 0.13
HNRNPC-221ENST00000555883 CCDC85CA6NKD9 419 aa15.87■□□□□ 0.13
HNRNPC-221ENST00000555883 FRAT2O75474 233 aaPredicted RBP15.87■□□□□ 0.13
HNRNPC-221ENST00000555883 IREB2P48200 963 aaKnown RBP15.87■□□□□ 0.13
HNRNPC-221ENST00000555883 RARSP54136 660 aaKnown RBP15.87■□□□□ 0.13
HNRNPC-221ENST00000555883 ATG9AQ7Z3C6 839 aa15.87■□□□□ 0.13
HNRNPC-221ENST00000555883 CTU1Q7Z7A3 348 aaKnown RBP15.87■□□□□ 0.13
HNRNPC-221ENST00000555883 SLC10A4Q96EP9 437 aa15.87■□□□□ 0.13
HNRNPC-221ENST00000555883 AOX1Q06278 1338 aa15.87■□□□□ 0.13
HNRNPC-221ENST00000555883 SLC5A1P13866 664 aa15.86■□□□□ 0.13
HNRNPC-221ENST00000555883 TNNI2P48788 182 aa15.86■□□□□ 0.13
HNRNPC-221ENST00000555883 BCAMP50895 628 aa15.86■□□□□ 0.13
HNRNPC-221ENST00000555883 PRKG1Q13976 671 aa15.86■□□□□ 0.13
HNRNPC-221ENST00000555883 PKN2Q16513 984 aaKnown RBP15.86■□□□□ 0.13
HNRNPC-221ENST00000555883 NBPF12Q5TAG4 269 aaPredicted RBP15.86■□□□□ 0.13
HNRNPC-221ENST00000555883 ANKRD13AQ8IZ07 590 aa15.86■□□□□ 0.13
HNRNPC-221ENST00000555883 TEKT1Q969V4 418 aa15.86■□□□□ 0.13
HNRNPC-221ENST00000555883 ZDHHC15Q96MV8 337 aa15.86■□□□□ 0.13
HNRNPC-221ENST00000555883 TDRD3Q9H7E2 651 aaKnown RBP15.86■□□□□ 0.13
HNRNPC-221ENST00000555883 USP2O75604 605 aaPredicted RBP15.85■□□□□ 0.13
HNRNPC-221ENST00000555883 FKBP1CQ5VVH2 108 aa15.85■□□□□ 0.13
HNRNPC-221ENST00000555883 INTS3Q68E01 1043 aaKnown RBP15.85■□□□□ 0.13
HNRNPC-221ENST00000555883 WDR66Q8TBY9 1149 aa15.85■□□□□ 0.13
HNRNPC-221ENST00000555883 TEPSINQ96N21 525 aa15.85■□□□□ 0.13
HNRNPC-221ENST00000555883 IL15P40933 162 aaPredicted RBP15.84■□□□□ 0.13
HNRNPC-221ENST00000555883 CHAF1AQ13111 956 aaPredicted RBP15.84■□□□□ 0.13
HNRNPC-221ENST00000555883 HHIPL2Q6UWX4 724 aa15.84■□□□□ 0.13
HNRNPC-221ENST00000555883 FAM83AQ86UY5 434 aa15.84■□□□□ 0.13
HNRNPC-221ENST00000555883 ZNF296Q8WUU4 475 aaPredicted RBP15.84■□□□□ 0.13
HNRNPC-221ENST00000555883 WNK4Q96J92 1243 aa15.84■□□□□ 0.13
HNRNPC-221ENST00000555883 COPRSQ9NQ92 184 aa15.84■□□□□ 0.13
HNRNPC-221ENST00000555883 IQSEC3Q9UPP2 1182 aaPredicted RBP15.84■□□□□ 0.13
HNRNPC-221ENST00000555883 GPR25O00155 361 aa15.83■□□□□ 0.12
HNRNPC-221ENST00000555883 SEMA3EO15041 775 aa15.83■□□□□ 0.12
HNRNPC-221ENST00000555883 TBC1D8O95759 1140 aa15.83■□□□□ 0.12
HNRNPC-221ENST00000555883 GNAI3P08754 354 aa15.83■□□□□ 0.12
HNRNPC-221ENST00000555883 GRIK5Q16478 980 aa15.83■□□□□ 0.12
HNRNPC-221ENST00000555883 CLMNQ96JQ2 1002 aa15.83■□□□□ 0.12
HNRNPC-221ENST00000555883 CEP126Q9P2H0 1117 aa15.83■□□□□ 0.12
HNRNPC-221ENST00000555883 FZD1Q9UP38 647 aa15.83■□□□□ 0.12
HNRNPC-221ENST00000555883 RPAP1Q9BWH6 1393 aaPredicted RBP15.83■□□□□ 0.12
HNRNPC-221ENST00000555883 TESPA1A2RU30 521 aaPredicted RBP15.82■□□□□ 0.12
HNRNPC-221ENST00000555883 IPO8O15397 1037 aaKnown RBP15.82■□□□□ 0.12
HNRNPC-221ENST00000555883 MKRN3Q13064 507 aaKnown RBP15.82■□□□□ 0.12
HNRNPC-221ENST00000555883 MTX1Q13505 466 aa15.82■□□□□ 0.12
HNRNPC-221ENST00000555883 ATP2B3Q16720 1220 aa15.82■□□□□ 0.12
HNRNPC-221ENST00000555883 APOBEC3HQ6NTF7 200 aaKnown RBP15.82■□□□□ 0.12
HNRNPC-221ENST00000555883 IFNL1Q8IU54 200 aa15.82■□□□□ 0.12
HNRNPC-221ENST00000555883 HOOK2Q96ED9 719 aa15.82■□□□□ 0.12
HNRNPC-221ENST00000555883 GNL3LQ9NVN8 582 aaKnown RBP15.82■□□□□ 0.12
HNRNPC-221ENST00000555883 LRRFIP2Q9Y608 721 aaKnown RBP15.82■□□□□ 0.12
HNRNPC-221ENST00000555883 SALL1Q9NSC2 1324 aa15.82■□□□□ 0.12
HNRNPC-221ENST00000555883 TCP10L2B9ZVM9 353 aa15.81■□□□□ 0.12
HNRNPC-221ENST00000555883 MLLT1Q03111 559 aaPredicted RBP15.81■□□□□ 0.12
HNRNPC-221ENST00000555883 OTUD7BQ6GQQ9 843 aa15.81■□□□□ 0.12
HNRNPC-221ENST00000555883 MEIS3Q99687 375 aa15.81■□□□□ 0.12
HNRNPC-221ENST00000555883 TMEM39BQ9GZU3 492 aa15.81■□□□□ 0.12
HNRNPC-221ENST00000555883 TMOD2Q9NZR1 351 aa15.81■□□□□ 0.12
HNRNPC-221ENST00000555883 PDS5AQ29RF7 1337 aaKnown RBP15.8■□□□□ 0.12
HNRNPC-221ENST00000555883 FKTNO75072 461 aa15.8■□□□□ 0.12
HNRNPC-221ENST00000555883 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.8■□□□□ 0.122e-14■□□□□ 9.1
HNRNPC-221ENST00000555883 SIL1Q9H173 461 aa15.8■□□□□ 0.12
HNRNPC-221ENST00000555883 GJA5P36382 358 aa15.79■□□□□ 0.12
HNRNPC-221ENST00000555883 MAP3K9P80192 1104 aa15.79■□□□□ 0.12
HNRNPC-221ENST00000555883 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.79■□□□□ 0.12
HNRNPC-221ENST00000555883 DENND2AQ9ULE3 1009 aa15.79■□□□□ 0.12
HNRNPC-221ENST00000555883 OTOFQ9HC10 1997 aa15.78■□□□□ 0.12
HNRNPC-221ENST00000555883 IGF2BP3O00425 579 aaKnown RBP eCLIP15.78■□□□□ 0.12
HNRNPC-221ENST00000555883 TRIM27P14373 513 aa15.78■□□□□ 0.12
HNRNPC-221ENST00000555883 ATF7IPQ6VMQ6 1270 aa15.78■□□□□ 0.12
HNRNPC-221ENST00000555883 CDAN1Q8IWY9 1227 aa15.78■□□□□ 0.12
HNRNPC-221ENST00000555883 OPTNQ96CV9 577 aa15.78■□□□□ 0.12
HNRNPC-221ENST00000555883 CSADQ9Y600 493 aa15.78■□□□□ 0.12
HNRNPC-221ENST00000555883 VGLL4Q14135 290 aa15.77■□□□□ 0.12
HNRNPC-221ENST00000555883 FBXO46Q6PJ61 603 aaPredicted RBP15.77■□□□□ 0.12
HNRNPC-221ENST00000555883 ZGPATQ8N5A5 531 aaKnown RBP15.77■□□□□ 0.12
HNRNPC-221ENST00000555883 MS4A4AQ96JQ5 239 aa15.77■□□□□ 0.12
HNRNPC-221ENST00000555883 HPS5Q9UPZ3 1129 aa15.77■□□□□ 0.12
HNRNPC-221ENST00000555883 AKAP2Q9Y2D5 859 aa15.77■□□□□ 0.12
HNRNPC-221ENST00000555883 HTTP42858 3142 aa15.77■□□□□ 0.11
HNRNPC-221ENST00000555883 SPDYE5A6NIY4 337 aa15.76■□□□□ 0.11
HNRNPC-221ENST00000555883 SRGAP3O43295 1099 aa15.76■□□□□ 0.11
HNRNPC-221ENST00000555883 LDHBP07195 334 aaKnown RBP15.76■□□□□ 0.11
HNRNPC-221ENST00000555883 PRDX5P30044 214 aa15.76■□□□□ 0.11
HNRNPC-221ENST00000555883 GTF2A2P52657 109 aa15.76■□□□□ 0.11
HNRNPC-221ENST00000555883 CACNB3P54284 484 aa15.76■□□□□ 0.11
HNRNPC-221ENST00000555883 DCAF15Q66K64 600 aa15.76■□□□□ 0.11
HNRNPC-221ENST00000555883 FAM151AQ8WW52 585 aa15.76■□□□□ 0.11
HNRNPC-221ENST00000555883 R3HDMLQ9H3Y0 253 aa15.76■□□□□ 0.11
HNRNPC-221ENST00000555883 ELP3Q9H9T3 547 aa15.76■□□□□ 0.11
HNRNPC-221ENST00000555883 PA2G4Q9UQ80 394 aaKnown RBP15.76■□□□□ 0.11
HNRNPC-221ENST00000555883 DAGLAQ9Y4D2 1042 aa15.76■□□□□ 0.11
HNRNPC-221ENST00000555883 MYH13Q9UKX3 1938 aa15.76■□□□□ 0.11
HNRNPC-221ENST00000555883 TNRC18O15417 2968 aaPredicted RBP15.75■□□□□ 0.11
HNRNPC-221ENST00000555883 PHKA1P46020 1223 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms