RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 TCEAL1Q15170 157 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 ZNF468Q5VIY5 522 aaPredicted RBP4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 FOXR1Q6PIV2 292 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 CCDC81Q6ZN84 652 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 SYT9Q86SS6 491 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 OR6P1Q8NGX9 317 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 FBXO27Q8NI29 283 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 JARID2Q92833 1246 aaPredicted RBP4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 KIFC2Q96AC6 838 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 DEPDC7Q96QD5 511 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 FERD3LQ96RJ6 166 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 CRBNQ96SW2 442 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 EMILIN2Q9BXX0 1053 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 IGFLR1Q9H665 355 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 SENP2Q9HC62 589 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 AAASQ9NRG9 546 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 SNTG2Q9NY99 539 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 PPT2Q9UMR5 302 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 SOX13Q9UN79 622 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 PCDHB5Q9Y5E4 795 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 ENPP3O14638 875 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 ST8SIA5O15466 376 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 GFRA3O60609 400 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 CILPO75339 1184 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 BPNT1O95861 308 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 IMPDH2P12268 514 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 ARNTP27540 789 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 GIPRP48546 466 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 CTBSQ01459 385 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 TBC1D8BQ0IIM8 1120 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 SEPT6Q14141 434 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 ZNF423Q2M1K9 1284 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 SCARA3Q6AZY7 606 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 LLGL2Q6P1M3 1020 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 REC114Q7Z4M0 266 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 VN1R5Q7Z5H4 357 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 FAM35AQ86V20 835 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 SULF2Q8IWU5 870 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 REXO1Q8N1G1 1221 aaKnown RBP4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 MICALL1Q8N3F8 863 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 PLD4Q96BZ4 506 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 ADAM19Q9H013 955 aa4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 AVENQ9NQS1 362 aaPredicted RBP4.36□□□□□ -1.71
MTHFD1-212ENST00000555858 FAM177BA6PVY3 158 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 CPB1P15086 417 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 RASIP1Q5U651 963 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 FBXW10Q5XX13 1052 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 ELMSAN1Q6PJG2 1045 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 FAM169BQ8N8A8 192 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 RBBP8NLQ8NC74 664 aaPredicted RBP4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 DDX54Q8TDD1 881 aaKnown RBP4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 TNFRSF25Q93038 417 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 RNPC3Q96LT9 517 aaKnown RBP4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 CCDC113Q9H0I3 377 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 CBX8Q9HC52 389 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 BRMS1Q9HCU9 246 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 ACTR10Q9NZ32 417 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 ZNRF3Q9ULT6 936 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 SLC6A14Q9UN76 642 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 MSRB2Q9Y3D2 182 aa4.35□□□□□ -1.71
MTHFD1-212ENST00000555858 FAM221BA6H8Z2 402 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 GPR25O00155 361 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 ESRRAP11474 423 aaPredicted RBP4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 BMP4P12644 408 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 RPL6Q02878 288 aaKnown RBP4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 ZNF252P-AS1Q0IIN9 211 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 AP3B2Q13367 1082 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 LAPTM4AQ15012 233 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 DDR2Q16832 855 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 PERM1Q5SV97 790 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 RNF187Q5TA31 235 aaPredicted RBP4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 GK5Q6ZS86 529 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 CACTIN-AS1Q8N1I8 211 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 CELF2-AS1Q8N7Q2 184 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 GRIN3AQ8TCU5 1115 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 STK35Q8TDR2 534 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 GAL3ST3Q96A11 431 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 TRIM47Q96LD4 638 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 SMG9Q9H0W8 520 aaKnown RBP4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 FRRS1LQ9P0K9 344 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 DACH1Q9UI36 760 aa4.34□□□□□ -1.71
MTHFD1-212ENST00000555858 CDC14CA4D256 554 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 CCDC85CA6NKD9 419 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 ADARB2-AS1A8MUL3 147 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 C2CD2LO14523 706 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 EIF4EBP3O60516 100 aaPredicted RBP4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 TRIM37O94972 964 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 ADH7P40394 386 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 CASP7P55210 303 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 PCBP4P57723 403 aaKnown RBP4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 CABP4P57796 275 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 CLCQ05315 142 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 IFRD2Q12894 506 aaPredicted RBP4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 IKBKEQ14164 716 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 FXNQ16595 210 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 PLEKHG4Q58EX7 1191 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 ADAMTSL4Q6UY14 1074 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 SV2AQ7L0J3 742 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 PDZD3Q86UT5 571 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 LSRQ86X29 649 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms