RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 GNAI3P08754 354 aa19.21■□□□□ 0.67
SNX6-205ENST00000555648 HDLBPQ00341 1268 aaKnown RBP19.21■□□□□ 0.67
SNX6-205ENST00000555648 NBPF12Q5TAG4 269 aaPredicted RBP19.21■□□□□ 0.67
SNX6-205ENST00000555648 FRAT1Q92837 279 aaPredicted RBP19.21■□□□□ 0.67
SNX6-205ENST00000555648 FZD1Q9UP38 647 aa19.21■□□□□ 0.67
SNX6-205ENST00000555648 UNCXA6NJT0 531 aa19.2■□□□□ 0.66
SNX6-205ENST00000555648 TCP10L2B9ZVM9 353 aa19.2■□□□□ 0.66
SNX6-205ENST00000555648 FGFR2P21802 821 aa19.2■□□□□ 0.66
SNX6-205ENST00000555648 IL15P40933 162 aaPredicted RBP19.2■□□□□ 0.66
SNX6-205ENST00000555648 SPRYD7Q5W111 196 aa19.2■□□□□ 0.66
SNX6-205ENST00000555648 WDR66Q8TBY9 1149 aa19.2■□□□□ 0.66
SNX6-205ENST00000555648 SUGT1Q9Y2Z0 365 aa19.2■□□□□ 0.66
SNX6-205ENST00000555648 TM4SF4P48230 202 aa19.19■□□□□ 0.66
SNX6-205ENST00000555648 MAP3K11Q16584 847 aa19.19■□□□□ 0.66
SNX6-205ENST00000555648 ATP2B3Q16720 1220 aa19.19■□□□□ 0.66
SNX6-205ENST00000555648 MEIS3Q99687 375 aa19.19■□□□□ 0.66
SNX6-205ENST00000555648 MANSC4A6NHS7 340 aaPredicted RBP19.18■□□□□ 0.66
SNX6-205ENST00000555648 TBC1D8O95759 1140 aa19.18■□□□□ 0.66
SNX6-205ENST00000555648 ALDH1A1P00352 501 aa19.18■□□□□ 0.66
SNX6-205ENST00000555648 INHBEP58166 350 aa19.18■□□□□ 0.66
SNX6-205ENST00000555648 DIEXFQ68CQ4 756 aaKnown RBP19.18■□□□□ 0.66
SNX6-205ENST00000555648 INTS3Q68E01 1043 aaKnown RBP19.18■□□□□ 0.66
SNX6-205ENST00000555648 ATG9AQ7Z3C6 839 aa19.18■□□□□ 0.66
SNX6-205ENST00000555648 ANKRD13AQ8IZ07 590 aa19.18■□□□□ 0.66
SNX6-205ENST00000555648 AOX1Q06278 1338 aa19.18■□□□□ 0.66
SNX6-205ENST00000555648 ZNF646O15015 1829 aaPredicted RBP19.18■□□□□ 0.66
SNX6-205ENST00000555648 A0A1B0GUL6 1792 aa19.17■□□□□ 0.66
SNX6-205ENST00000555648 ZBTB48P10074 688 aaPredicted RBP19.17■□□□□ 0.66
SNX6-205ENST00000555648 HNRNPUQ00839 825 aaKnown RBP eCLIP19.17■□□□□ 0.66
SNX6-205ENST00000555648 GRIK5Q16478 980 aa19.17■□□□□ 0.66
SNX6-205ENST00000555648 CTU1Q7Z7A3 348 aaKnown RBP19.17■□□□□ 0.66
SNX6-205ENST00000555648 MRIQ9BWK5 157 aa19.17■□□□□ 0.66
SNX6-205ENST00000555648 SRGAP3O43295 1099 aa19.16■□□□□ 0.66
SNX6-205ENST00000555648 WNK4Q96J92 1243 aa19.16■□□□□ 0.66
SNX6-205ENST00000555648 CLMNQ96JQ2 1002 aa19.16■□□□□ 0.66
SNX6-205ENST00000555648 ZDHHC15Q96MV8 337 aa19.16■□□□□ 0.66
SNX6-205ENST00000555648 PA2G4Q9UQ80 394 aaKnown RBP19.16■□□□□ 0.66
SNX6-205ENST00000555648 USP2O75604 605 aaPredicted RBP19.15■□□□□ 0.66
SNX6-205ENST00000555648 OTUD7BQ6GQQ9 843 aa19.15■□□□□ 0.66
SNX6-205ENST00000555648 ATF7IPQ6VMQ6 1270 aa19.15■□□□□ 0.66
SNX6-205ENST00000555648 MIER1Q8N108 512 aa19.15■□□□□ 0.66
SNX6-205ENST00000555648 HOOK2Q96ED9 719 aa19.15■□□□□ 0.66
SNX6-205ENST00000555648 TMEM39BQ9GZU3 492 aa19.15■□□□□ 0.66
SNX6-205ENST00000555648 COPRSQ9NQ92 184 aa19.15■□□□□ 0.66
SNX6-205ENST00000555648 TRIM27P14373 513 aa19.14■□□□□ 0.65
SNX6-205ENST00000555648 HHIPL2Q6UWX4 724 aa19.14■□□□□ 0.65
SNX6-205ENST00000555648 CLUAP1Q96AJ1 413 aa19.14■□□□□ 0.65
SNX6-205ENST00000555648 DENND2AQ9ULE3 1009 aa19.14■□□□□ 0.65
SNX6-205ENST00000555648 AKAP2Q9Y2D5 859 aa19.14■□□□□ 0.65
SNX6-205ENST00000555648 CSADQ9Y600 493 aa19.14■□□□□ 0.65
SNX6-205ENST00000555648 GPR25O00155 361 aa19.13■□□□□ 0.65
SNX6-205ENST00000555648 SEMA3EO15041 775 aa19.13■□□□□ 0.65
SNX6-205ENST00000555648 BCAR3O75815 825 aa19.13■□□□□ 0.65
SNX6-205ENST00000555648 GNAI2P04899 355 aa19.13■□□□□ 0.65
SNX6-205ENST00000555648 LDHBP07195 334 aaKnown RBP19.13■□□□□ 0.65
SNX6-205ENST00000555648 CACNB3P54284 484 aa19.13■□□□□ 0.65
SNX6-205ENST00000555648 ZNF296Q8WUU4 475 aaPredicted RBP19.13■□□□□ 0.65
SNX6-205ENST00000555648 ELP3Q9H9T3 547 aa19.13■□□□□ 0.65
SNX6-205ENST00000555648 SSC5DA1L4H1 1573 aa19.13■□□□□ 0.65
SNX6-205ENST00000555648 MAP3K9P80192 1104 aa19.12■□□□□ 0.65
SNX6-205ENST00000555648 PKN2Q16513 984 aaKnown RBP19.12■□□□□ 0.65
SNX6-205ENST00000555648 ZKSCAN2Q63HK3 967 aa19.12■□□□□ 0.65
SNX6-205ENST00000555648 IFNL1Q8IU54 200 aa19.12■□□□□ 0.65
SNX6-205ENST00000555648 ZGPATQ8N5A5 531 aaKnown RBP19.12■□□□□ 0.65
SNX6-205ENST00000555648 CASP8AP2Q9UKL3 1982 aa19.12■□□□□ 0.65
SNX6-205ENST00000555648 FKTNO75072 461 aa19.11■□□□□ 0.65
SNX6-205ENST00000555648 NOM1Q5C9Z4 860 aaKnown RBP19.11■□□□□ 0.65
SNX6-205ENST00000555648 FKBP1CQ5VVH2 108 aa19.11■□□□□ 0.65
SNX6-205ENST00000555648 APOBEC3HQ6NTF7 200 aaKnown RBP19.11■□□□□ 0.65
SNX6-205ENST00000555648 FAM83AQ86UY5 434 aa19.11■□□□□ 0.65
SNX6-205ENST00000555648 OPTNQ96CV9 577 aa19.11■□□□□ 0.65
SNX6-205ENST00000555648 TEPSINQ96N21 525 aa19.11■□□□□ 0.65
SNX6-205ENST00000555648 PHKA1P46020 1223 aa19.1■□□□□ 0.65
SNX6-205ENST00000555648 GORABQ5T7V8 394 aa19.1■□□□□ 0.65
SNX6-205ENST00000555648 DCAF15Q66K64 600 aa19.1■□□□□ 0.65
SNX6-205ENST00000555648 FTSJ3Q8IY81 847 aaKnown RBP19.1■□□□□ 0.65
SNX6-205ENST00000555648 TIMM10P62072 90 aa19.09■□□□□ 0.65
SNX6-205ENST00000555648 MLLT1Q03111 559 aaPredicted RBP19.09■□□□□ 0.65
SNX6-205ENST00000555648 G3BP1Q13283 466 aaKnown RBP eCLIP19.09■□□□□ 0.65
SNX6-205ENST00000555648 MTX1Q13505 466 aa19.09■□□□□ 0.65
SNX6-205ENST00000555648 MVPQ14764 893 aaKnown RBP19.09■□□□□ 0.65
SNX6-205ENST00000555648 CCDC102BQ68D86 513 aa19.09■□□□□ 0.65
SNX6-205ENST00000555648 CDAN1Q8IWY9 1227 aa19.09■□□□□ 0.65
SNX6-205ENST00000555648 NEUROD6Q96NK8 337 aa19.09■□□□□ 0.65
SNX6-205ENST00000555648 CFHR5Q9BXR6 569 aa19.09■□□□□ 0.65
SNX6-205ENST00000555648 AKAP11Q9UKA4 1901 aa19.09■□□□□ 0.65
SNX6-205ENST00000555648 A0A1B0GUL7 405 aa19.08■□□□□ 0.64
SNX6-205ENST00000555648 PRDX5P30044 214 aa19.08■□□□□ 0.64
SNX6-205ENST00000555648 ADORA1P30542 326 aa19.08■□□□□ 0.64
SNX6-205ENST00000555648 TFCP2Q12800 502 aa19.08■□□□□ 0.64
SNX6-205ENST00000555648 DIXDC1Q155Q3 683 aa19.08■□□□□ 0.64
SNX6-205ENST00000555648 DZIP1Q86YF9 867 aaKnown RBP19.08■□□□□ 0.64
SNX6-205ENST00000555648 SLF2Q8IX21 1173 aa19.08■□□□□ 0.64
SNX6-205ENST00000555648 DAGLAQ9Y4D2 1042 aa19.08■□□□□ 0.64
SNX6-205ENST00000555648 SALL1Q9NSC2 1324 aa19.07■□□□□ 0.64
SNX6-205ENST00000555648 WDHD1O75717 1129 aaPredicted RBP19.07■□□□□ 0.64
SNX6-205ENST00000555648 VGLL4Q14135 290 aa19.07■□□□□ 0.64
SNX6-205ENST00000555648 SPTY2D1Q68D10 685 aaPredicted RBP19.07■□□□□ 0.64
SNX6-205ENST00000555648 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.07■□□□□ 0.64
SNX6-205ENST00000555648 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 196.3 ms